RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 MRM1Q6IN84 353 aaKnown RBP5□□□□□ -1.61
ECHDC1-213ENST00000474240 ZNF227Q86WZ6 799 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 ZNF513Q8N8E2 541 aaPredicted RBP5□□□□□ -1.61
ECHDC1-213ENST00000474240 MICAL1Q8TDZ2 1067 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 DEPDC7Q96QD5 511 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 NKX2-4Q9H2Z4 354 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 CYP26B1Q9NR63 512 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 APEX2Q9UBZ4 518 aa5□□□□□ -1.61
ECHDC1-213ENST00000474240 TMEM82A0PJX8 343 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 FGF10O15520 208 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 FKTNO75072 461 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 KCNH1O95259 989 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 ITGAVP06756 1048 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 YBX1P67809 324 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 ADAM17P78536 824 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 SLC14A2Q15849 920 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 E4F1Q66K89 784 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 OLFML2BQ68BL8 750 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 IQCEQ6IPM2 695 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 GALNT18Q6P9A2 607 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 FERMT3Q86UX7 667 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 PMFBP1Q8TBY8 1022 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 MRFAP1L1Q96HT8 127 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 MRGPRX3Q96LB0 322 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 IPO9Q96P70 1041 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 SRPK1Q96SB4 655 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 DNAJC2Q99543 621 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 ERVK13-1Q9NX77 482 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 TAF6LQ9Y6J9 622 aa4.99□□□□□ -1.61
ECHDC1-213ENST00000474240 C2orf71A6NGG8 1288 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 FFAR3O14843 346 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 NRDCO43847 1150 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 SCG5P05408 212 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 PAMP19021 973 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 MAGEA10P43363 369 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 KCNC1P48547 511 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 SLURP1P55000 103 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 NCKAP1LP55160 1127 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 MAP4K2Q12851 820 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 RASA3Q14644 834 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 RTP2Q5QGT7 225 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 GTF2IRD2BQ6EKJ0 949 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 TMC6Q7Z403 805 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 GTF2IRD2Q86UP8 949 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 LDHDQ86WU2 507 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 JAMLQ86YT9 394 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 PTCHD1Q96NR3 888 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 FCRL3Q96P31 734 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 SORCS2Q96PQ0 1159 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 AARSD1Q9BTE6 412 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 SCAND2PQ9GZW5 306 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 CRTAC1Q9NQ79 661 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 AP5S1Q9NUS5 200 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 SNTG2Q9NY99 539 aa4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 CNOT11Q9UKZ1 510 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-213ENST00000474240 TRAV20A0A0B4J274 112 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 CCDC163A0A0D9SF12 145 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 FADS2P1A8MWK0 482 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 STXBP3O00186 592 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 FGFR1P11362 822 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 HMGA2P52926 109 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 RTP1P59025 263 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 SSRP1Q08945 709 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 KCNAB2Q13303 367 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 LAPTM5Q13571 262 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 ZFYVE27Q5T4F4 411 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 ACBD5Q5T8D3 534 aaPredicted RBP4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 CEP128Q6ZU80 1094 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 KCTD13Q8WZ19 329 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 COPS5Q92905 334 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 HHIPL1Q96JK4 782 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 SPATA9Q9BWV2 254 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 USP40Q9NVE5 1235 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 USP35Q9P2H5 1018 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 MINPP1Q9UNW1 487 aa4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 GPR55Q9Y2T6 319 aaPredicted RBP4.97□□□□□ -1.61
ECHDC1-213ENST00000474240 NPHP3-ACAD11A0A0J9YXS1 232 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 A0A1W2PQ27 194 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 A0A1W2PQ64 194 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 A0A1W2PQC6 194 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 A0A1W2PQD8 194 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 A0A1W2PQU0 124 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 APPP05067 770 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 SNRPB2P08579 225 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 IFNGR1P15260 489 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 L1CAMP32004 1257 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 ARL4AP40617 200 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 LIMS1P48059 325 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 GTF2A2P52657 109 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 PPP2R2AP63151 447 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 TMEM62Q0P6H9 643 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 TESK1Q15569 626 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 SLCO6A1Q86UG4 719 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 MMP19Q99542 508 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 MENTQ9BUN1 341 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 LNPKQ9C0E8 428 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 ZSWIM4Q9H7M6 989 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 CDK11AQ9UQ88 783 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 PCDHA5Q9Y5H7 936 aa4.96□□□□□ -1.62
ECHDC1-213ENST00000474240 CCDC85CA6NKD9 419 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms