RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ZEB2O60315 1214 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 CABYRO75952 493 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 CLTBP09497 229 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 CALM1P0DP23 149 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 CALM2P0DP24 149 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 CALM3P0DP25 149 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 PTGS1P23219 599 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 SMARCA1P28370 1054 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 GNAQP50148 359 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 GHRHRQ02643 423 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 CXCL17Q6UXB2 119 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 TDHQ8IZJ6 230 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 SAMD3Q8N6K7 520 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 TRIM43Q96BQ3 446 aaPredicted RBP12.97□□□□□ -0.33
CKS1B-206ENST00000474215 LZTS2Q9BRK4 669 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 SPZ1Q9BXG8 430 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 LCTP09848 1927 aa12.96□□□□□ -0.33
CKS1B-206ENST00000474215 A0A0U1RQG5 324 aaPredicted RBP12.96□□□□□ -0.33
CKS1B-206ENST00000474215 ARVCFO00192 962 aa12.96□□□□□ -0.33
CKS1B-206ENST00000474215 KIAA0355O15063 1070 aa12.96□□□□□ -0.33
CKS1B-206ENST00000474215 NKRFO15226 690 aaKnown RBP eCLIP12.96□□□□□ -0.33
CKS1B-206ENST00000474215 TXNP10599 105 aaKnown RBP12.96□□□□□ -0.33
CKS1B-206ENST00000474215 EXOSC10Q01780 885 aaKnown RBP12.96□□□□□ -0.33
CKS1B-206ENST00000474215 FAAP100Q0VG06 881 aa12.96□□□□□ -0.33
CKS1B-206ENST00000474215 KRT32Q14532 448 aa12.96□□□□□ -0.33
CKS1B-206ENST00000474215 PPP2R5BQ15173 497 aa12.96□□□□□ -0.33
CKS1B-206ENST00000474215 STXBP2Q15833 593 aa12.96□□□□□ -0.33
CKS1B-206ENST00000474215 ARHGEF16Q5VV41 709 aa12.96□□□□□ -0.33
CKS1B-206ENST00000474215 DHX32Q7L7V1 743 aaKnown RBP12.96□□□□□ -0.33
CKS1B-206ENST00000474215 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
CKS1B-206ENST00000474215 BADQ92934 168 aa12.96□□□□□ -0.33
CKS1B-206ENST00000474215 RRP36Q96EU6 259 aaKnown RBP12.96□□□□□ -0.33
CKS1B-206ENST00000474215 LRRC2Q9BYS8 371 aa12.96□□□□□ -0.33
CKS1B-206ENST00000474215 TMEM39AQ9NV64 488 aa12.96□□□□□ -0.33
CKS1B-206ENST00000474215 SLC12A7Q9Y666 1083 aa12.96□□□□□ -0.33
CKS1B-206ENST00000474215 TRIOBPQ9H2D6 2365 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 MROH7Q68CQ1 1323 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 GCOM1H8Y6P7 765 aaPredicted RBP12.95□□□□□ -0.34
CKS1B-206ENST00000474215 EIF3JO75822 258 aaKnown RBP12.95□□□□□ -0.34
CKS1B-206ENST00000474215 NR3C2P08235 984 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 POLR2MP0CAP2 368 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 EIF2AK2P19525 551 aaKnown RBP12.95□□□□□ -0.34
CKS1B-206ENST00000474215 HOXA13P31271 388 aaPredicted RBP12.95□□□□□ -0.34
CKS1B-206ENST00000474215 CPT1AP50416 773 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 TTLL4Q14679 1199 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 ADCK5Q3MIX3 580 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 ERICH6BQ5W0A0 696 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 CCDC62Q6P9F0 684 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 SGMS1Q86VZ5 419 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 SRBD1Q8N5C6 995 aaKnown RBP12.95□□□□□ -0.34
CKS1B-206ENST00000474215 FANCBQ8NB91 859 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 SLC43A3Q8NBI5 491 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 PIBF1Q8WXW3 757 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 SEZ6LQ9BYH1 1024 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 PXMP2Q9NR77 195 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 PPP4R2Q9NY27 417 aa12.95□□□□□ -0.34
CKS1B-206ENST00000474215 LRRC37A2A6NM11 1700 aa12.94□□□□□ -0.34
CKS1B-206ENST00000474215 PLEKHA8P1O95397 391 aa12.94□□□□□ -0.34
CKS1B-206ENST00000474215 HMGB1P09429 215 aaKnown RBP12.94□□□□□ -0.34
CKS1B-206ENST00000474215 RAG1P15918 1043 aa12.94□□□□□ -0.34
CKS1B-206ENST00000474215 RXRAP19793 462 aa12.94□□□□□ -0.34
CKS1B-206ENST00000474215 ITGA7Q13683 1181 aa12.94□□□□□ -0.34
CKS1B-206ENST00000474215 LRIT3Q3SXY7 679 aa12.94□□□□□ -0.34
CKS1B-206ENST00000474215 BRDTQ58F21 947 aaPredicted RBP12.94□□□□□ -0.34
CKS1B-206ENST00000474215 SYNE3Q6ZMZ3 975 aa12.94□□□□□ -0.34
CKS1B-206ENST00000474215 SEPT14Q6ZU15 432 aa12.94□□□□□ -0.34
CKS1B-206ENST00000474215 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
CKS1B-206ENST00000474215 KCNB2Q92953 911 aa12.94□□□□□ -0.34
CKS1B-206ENST00000474215 POLR3EQ9NVU0 708 aa12.94□□□□□ -0.34
CKS1B-206ENST00000474215 SEC63Q9UGP8 760 aaKnown RBP12.94□□□□□ -0.34
CKS1B-206ENST00000474215 GRIN2DO15399 1336 aa12.93□□□□□ -0.34
CKS1B-206ENST00000474215 A6NJR5 290 aa12.93□□□□□ -0.34
CKS1B-206ENST00000474215 SOX1O00570 391 aaPredicted RBP12.93□□□□□ -0.34
CKS1B-206ENST00000474215 TLR3O15455 904 aaKnown RBP12.93□□□□□ -0.34
CKS1B-206ENST00000474215 KPNA6O60684 536 aa12.93□□□□□ -0.34
CKS1B-206ENST00000474215 REC8O95072 547 aa12.93□□□□□ -0.34
CKS1B-206ENST00000474215 ARIH2O95376 493 aa12.93□□□□□ -0.34
CKS1B-206ENST00000474215 ITGB8P26012 769 aa12.93□□□□□ -0.34
CKS1B-206ENST00000474215 HSPA4P34932 840 aa12.93□□□□□ -0.34
CKS1B-206ENST00000474215 LY6KQ17RY6 165 aa12.93□□□□□ -0.34
CKS1B-206ENST00000474215 VSIG10LQ86VR7 867 aa12.93□□□□□ -0.34
CKS1B-206ENST00000474215 FCHSD1Q86WN1 690 aa12.93□□□□□ -0.34
CKS1B-206ENST00000474215 FAM126BQ8IXS8 530 aa12.93□□□□□ -0.34
CKS1B-206ENST00000474215 CMTR1Q8N1G2 835 aaKnown RBP12.93□□□□□ -0.34
CKS1B-206ENST00000474215 COPS5Q92905 334 aa12.93□□□□□ -0.34
CKS1B-206ENST00000474215 PDCD2LQ9BRP1 358 aa12.93□□□□□ -0.34
CKS1B-206ENST00000474215 TIMP1P01033 207 aa12.92□□□□□ -0.34
CKS1B-206ENST00000474215 CD4P01730 458 aa12.92□□□□□ -0.34
CKS1B-206ENST00000474215 MYL3P08590 195 aa12.92□□□□□ -0.34
CKS1B-206ENST00000474215 MYCLP12524 364 aaPredicted RBP12.92□□□□□ -0.34
CKS1B-206ENST00000474215 PSMC6P62333 389 aa12.92□□□□□ -0.34
CKS1B-206ENST00000474215 PURAQ00577 322 aaKnown RBP12.92□□□□□ -0.34
CKS1B-206ENST00000474215 PGM5Q15124 567 aa12.92□□□□□ -0.34
CKS1B-206ENST00000474215 APOA5Q6Q788 366 aa12.92□□□□□ -0.34
CKS1B-206ENST00000474215 RAB11FIP4Q86YS3 637 aa12.92□□□□□ -0.34
CKS1B-206ENST00000474215 CCDC82Q8N4S0 544 aa12.92□□□□□ -0.34
CKS1B-206ENST00000474215 LRCH3Q96II8 777 aa12.92□□□□□ -0.34
CKS1B-206ENST00000474215 TCEANC2Q96MN5 208 aa12.92□□□□□ -0.34
CKS1B-206ENST00000474215 MTG1Q9BT17 334 aaPredicted RBP12.92□□□□□ -0.34
CKS1B-206ENST00000474215 DDX41Q9UJV9 622 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms