RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 LRRN2O75325 713 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 VAMP4O75379 141 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 LTBRP36941 435 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 PCBP3P57721 371 aaKnown RBP5.72□□□□□ -1.49
BRCA1-212ENST00000473961 GPR85P60893 370 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 OCRLQ01968 901 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 BRDTQ58F21 947 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-212ENST00000473961 RCSD1Q6JBY9 416 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 ZCCHC8Q6NZY4 707 aaKnown RBP5.72□□□□□ -1.49
BRCA1-212ENST00000473961 ZAR1Q86SH2 424 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 SPATS2Q86XZ4 545 aaKnown RBP5.72□□□□□ -1.49
BRCA1-212ENST00000473961 COPS5Q92905 334 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 C1orf159Q96HA4 380 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 Q96M66 194 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 HDAC8Q9BY41 377 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 IFT22Q9H7X7 185 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 CABP5Q9NP86 173 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 GPR27Q9NS67 375 aa5.72□□□□□ -1.49
BRCA1-212ENST00000473961 ZC3H7BQ9UGR2 993 aaKnown RBP5.72□□□□□ -1.49
BRCA1-212ENST00000473961 BLACEA4D250 179 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 GAS7O60861 476 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 LEFTY1O75610 366 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 CRTAMO95727 393 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 THBDP07204 575 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 ZSCAN22P10073 491 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-212ENST00000473961 FAPQ12884 760 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 FAM50AQ14320 339 aaKnown RBP5.71□□□□□ -1.5
BRCA1-212ENST00000473961 TESK1Q15569 626 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 SF1Q15637 639 aaKnown RBP5.71□□□□□ -1.5
BRCA1-212ENST00000473961 NTRK3Q16288 839 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 PRSS53Q2L4Q9 553 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 KIZQ2M2Z5 673 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 FAM47CQ5HY64 1035 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 PKN3Q6P5Z2 889 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 CRTC3Q6UUV7 619 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 FGD2Q7Z6J4 655 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 ZC3H7AQ8IWR0 971 aaKnown RBP5.71□□□□□ -1.5
BRCA1-212ENST00000473961 BCL7CQ8WUZ0 217 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-212ENST00000473961 SYTL4Q96C24 671 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-212ENST00000473961 PHF20Q9BVI0 1012 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 MKNK2Q9HBH9 465 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 GEMIN8Q9NWZ8 242 aaKnown RBP5.71□□□□□ -1.5
BRCA1-212ENST00000473961 ZKSCAN5Q9Y2L8 839 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 CAPN6Q9Y6Q1 641 aa5.71□□□□□ -1.5
BRCA1-212ENST00000473961 GPR39O43194 453 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 ALDH1L1O75891 902 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 PAMP19021 973 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 POU3F3P20264 500 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-212ENST00000473961 RAP1GAPP47736 663 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 TNK2Q07912 1038 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 PAK1Q13153 545 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 ZNF460Q14592 562 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 PIK3R6Q5UE93 754 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 CDCA2Q69YH5 1023 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-212ENST00000473961 THAP5Q7Z6K1 395 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 C11orf74Q86VG3 221 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 PI4K2BQ8TCG2 481 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 DIO2Q92813 273 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 SCYL1Q96KG9 808 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 ORAI3Q9BRQ5 295 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 PUS7LQ9H0K6 701 aaKnown RBP5.7□□□□□ -1.5
BRCA1-212ENST00000473961 SLC5A4Q9NY91 659 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 SAMD15Q9P1V8 674 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 TRAF6Q9Y4K3 522 aa5.7□□□□□ -1.5
BRCA1-212ENST00000473961 E2F8A0AVK6 867 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 FAM170BA6NMN3 283 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 RASGRP1O95267 797 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 EYA4O95677 639 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 TBC1D8O95759 1140 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 TSPAN15O95858 294 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 VAV1P15498 845 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 CTSKP43235 329 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 CLCN7P51798 805 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 GTF2A2P52657 109 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 EVA1CP58658 441 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 ST5P78524 1137 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 CYP2R1Q6VVX0 501 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 RNF111Q6ZNA4 994 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 SPRED2Q7Z698 418 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 FMNL3Q8IVF7 1028 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 CCAR1Q8IX12 1150 aaKnown RBP5.69□□□□□ -1.5
BRCA1-212ENST00000473961 NAT16Q8N8M0 369 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 LINC00116Q8NCU8 138 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 NPLOC4Q8TAT6 608 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 GATA6Q92908 595 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 RELTQ969Z4 430 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 TCTN2Q96GX1 697 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 SCLYQ96I15 445 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 FCRL3Q96P31 734 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-212ENST00000473961 RC3H2Q9HBD1 1191 aaKnown RBP5.69□□□□□ -1.5
BRCA1-212ENST00000473961 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.69□□□□□ -1.5
BRCA1-212ENST00000473961 SLC5A6Q9Y289 635 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 SPEF1Q9Y4P9 236 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 PCDHA9Q9Y5H5 950 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 NPFFR2Q9Y5X5 522 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 WASHC2CQ9Y4E1 1318 aa5.69□□□□□ -1.5
BRCA1-212ENST00000473961 NPHP3-ACAD11A0A0J9YXS1 232 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 ARVCFO00192 962 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 ZNF205O95201 554 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 GSTM1P09488 218 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms