RNA–Protein interactions for RNA: ENST00000473388.6

ATXN1-204, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 1,569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-204ENST00000473388 RAD50Q92878 1312 aa8.74□□□□□ -1.01
ATXN1-204ENST00000473388 PRRC2BQ5JSZ5 2229 aaKnown RBP8.74□□□□□ -1.01
ATXN1-204ENST00000473388 RBM47A0AV96 593 aaKnown RBP8.73□□□□□ -1.01
ATXN1-204ENST00000473388 PITPNM1O00562 1244 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 ARIH2O95376 493 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 TXNP10599 105 aaKnown RBP8.73□□□□□ -1.01
ATXN1-204ENST00000473388 WDR5P61964 334 aaKnown RBP8.73□□□□□ -1.01
ATXN1-204ENST00000473388 BFSP2Q13515 415 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 PTGISQ16647 500 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 TCTN1Q2MV58 587 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 BRDTQ58F21 947 aaPredicted RBP8.73□□□□□ -1.01
ATXN1-204ENST00000473388 FAM117BQ6P1L5 589 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 NFRKBQ6P4R8 1299 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 RNF207Q6ZRF8 634 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 DCAF4Q8WV16 495 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 CHMP4BQ9H444 224 aaKnown RBP8.73□□□□□ -1.01
ATXN1-204ENST00000473388 TOMM22Q9NS69 142 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 XIRP2A4UGR9 3374 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 SCN10AQ9Y5Y9 1956 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 FOXP2O15409 715 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 GPR37L1O60883 481 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 BAIAP3O94812 1187 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 RPS6P62753 249 aaKnown RBP8.73□□□□□ -1.01
ATXN1-204ENST00000473388 GPNMBQ14956 572 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 RRP12Q5JTH9 1297 aaKnown RBP8.73□□□□□ -1.01
ATXN1-204ENST00000473388 PPP4R3BQ5MIZ7 849 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 ZMYM1Q5SVZ6 1142 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 GDF6Q6KF10 455 aaPredicted RBP8.73□□□□□ -1.01
ATXN1-204ENST00000473388 POTEHQ6S545 545 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 CHST3Q7LGC8 479 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 ALYREFQ86V81 257 aaKnown RBP8.73□□□□□ -1.01
ATXN1-204ENST00000473388 OTUD7AQ8TE49 926 aaPredicted RBP8.73□□□□□ -1.01
ATXN1-204ENST00000473388 CLEC4DQ8WXI8 215 aa8.73□□□□□ -1.01
ATXN1-204ENST00000473388 A6NJR5 290 aa8.72□□□□□ -1.01
ATXN1-204ENST00000473388 NKRFO15226 690 aaKnown RBP eCLIP8.72□□□□□ -1.014e-11■■□□□ 11.4
ATXN1-204ENST00000473388 PTPN11Q06124 597 aaPredicted RBP8.72□□□□□ -1.01
ATXN1-204ENST00000473388 LRRFIP1Q32MZ4 808 aaKnown RBP8.72□□□□□ -1.01
ATXN1-204ENST00000473388 USH1GQ495M9 461 aa8.72□□□□□ -1.01
ATXN1-204ENST00000473388 VPS53Q5VIR6 699 aa8.72□□□□□ -1.01
ATXN1-204ENST00000473388 BTNL9Q6UXG8 535 aa8.72□□□□□ -1.01
ATXN1-204ENST00000473388 LRRC8DQ7L1W4 858 aa8.72□□□□□ -1.01
ATXN1-204ENST00000473388 CCDC155Q8N6L0 562 aa8.72□□□□□ -1.01
ATXN1-204ENST00000473388 TET1Q8NFU7 2136 aa8.72□□□□□ -1.01
ATXN1-204ENST00000473388 SCFD2Q8WU76 684 aa8.72□□□□□ -1.01
ATXN1-204ENST00000473388 AFG1LQ8WV93 481 aa8.72□□□□□ -1.01
ATXN1-204ENST00000473388 DHX38Q92620 1227 aaKnown RBP8.72□□□□□ -1.01
ATXN1-204ENST00000473388 CTAGE1Q96RT6 745 aa8.72□□□□□ -1.01
ATXN1-204ENST00000473388 TMEM47Q9BQJ4 181 aa8.72□□□□□ -1.01
ATXN1-204ENST00000473388 UBE2ZQ9H832 354 aaPredicted RBP8.72□□□□□ -1.01
ATXN1-204ENST00000473388 SUGCTQ9HAC7 445 aa8.72□□□□□ -1.01
ATXN1-204ENST00000473388 ARIH1Q9Y4X5 557 aaPredicted RBP8.72□□□□□ -1.01
ATXN1-204ENST00000473388 TRIP12Q14669 1992 aaPredicted RBP8.71□□□□□ -1.01
ATXN1-204ENST00000473388 LOC102724159A0A0B4J2E5 919 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 LINC01553A4QN01 128 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 PI4K2BG5E9Z4 385 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 KPNA6O60684 536 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 NBNO60934 754 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 MMP3P08254 477 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 IL9P15248 144 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 SELPP16109 830 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 KCNA5P22460 613 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 EDNRBP24530 442 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 SSTR3P32745 418 aaPredicted RBP8.71□□□□□ -1.02
ATXN1-204ENST00000473388 PWP2Q15269 919 aaKnown RBP8.71□□□□□ -1.02
ATXN1-204ENST00000473388 LY6KQ17RY6 165 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 CNKSR3Q6P9H4 555 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 SEPT14Q6ZU15 432 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 MIER1Q8N108 512 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 CAGE1Q8TC20 777 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 PI4K2BQ8TCG2 481 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 AFAP1L1Q8TED9 768 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 UIMC1Q96RL1 719 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 CRBNQ96SW2 442 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 MPHOSPH6Q99547 160 aaKnown RBP8.71□□□□□ -1.02
ATXN1-204ENST00000473388 ALG1Q9BT22 464 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 CPVLQ9H3G5 476 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 DCTPP1Q9H773 170 aa8.71□□□□□ -1.02
ATXN1-204ENST00000473388 PDHBP11177 359 aa8.7□□□□□ -1.02
ATXN1-204ENST00000473388 TOP1P11387 765 aaKnown RBP8.7□□□□□ -1.02
ATXN1-204ENST00000473388 CKBP12277 381 aa8.7□□□□□ -1.02
ATXN1-204ENST00000473388 NOVP48745 357 aa8.7□□□□□ -1.02
ATXN1-204ENST00000473388 GJD3Q8N144 294 aa8.7□□□□□ -1.02
ATXN1-204ENST00000473388 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.7□□□□□ -1.02
ATXN1-204ENST00000473388 TBC1D5Q92609 795 aa8.7□□□□□ -1.02
ATXN1-204ENST00000473388 KAT2BQ92831 832 aa8.7□□□□□ -1.02
ATXN1-204ENST00000473388 TGS1Q96RS0 853 aaKnown RBP8.7□□□□□ -1.02
ATXN1-204ENST00000473388 C17orf80Q9BSJ5 609 aa8.7□□□□□ -1.02
ATXN1-204ENST00000473388 TTC41PQ6P2S7 1318 aa8.7□□□□□ -1.02
ATXN1-204ENST00000473388 SORBS3O60504 671 aa8.69□□□□□ -1.02
ATXN1-204ENST00000473388 GJB5O95377 273 aa8.69□□□□□ -1.02
ATXN1-204ENST00000473388 GH1P01241 217 aa8.69□□□□□ -1.02
ATXN1-204ENST00000473388 GOLGA8HP0CJ92 632 aa8.69□□□□□ -1.02
ATXN1-204ENST00000473388 ERVK-21P61565 698 aa8.69□□□□□ -1.02
ATXN1-204ENST00000473388 ZNF200P98182 395 aaPredicted RBP8.69□□□□□ -1.02
ATXN1-204ENST00000473388 ARHGAP1Q07960 439 aa8.69□□□□□ -1.02
ATXN1-204ENST00000473388 PTCRAQ6ISU1 281 aaPredicted RBP8.69□□□□□ -1.02
ATXN1-204ENST00000473388 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.69□□□□□ -1.02
ATXN1-204ENST00000473388 FAM178BQ8IXR5 827 aa8.69□□□□□ -1.02
ATXN1-204ENST00000473388 DNERQ8NFT8 737 aa8.69□□□□□ -1.02
ATXN1-204ENST00000473388 WNT8BQ93098 351 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms