RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 SAMD3Q8N6K7 520 aa26.14■■□□□ 1.78
PTP4A1-203ENST00000473334 SCFD2Q8WU76 684 aa26.14■■□□□ 1.78
PTP4A1-203ENST00000473334 NEK1Q96PY6 1258 aa26.14■■□□□ 1.78
PTP4A1-203ENST00000473334 IWS1Q96ST2 819 aa26.14■■□□□ 1.78
PTP4A1-203ENST00000473334 SPZ1Q9BXG8 430 aa26.14■■□□□ 1.78
PTP4A1-203ENST00000473334 LRRC2Q9BYS8 371 aa26.14■■□□□ 1.78
PTP4A1-203ENST00000473334 TRIM43BA6NCK2 446 aa26.13■■□□□ 1.77
PTP4A1-203ENST00000473334 DCDC2CA8MYV0 355 aa26.13■■□□□ 1.77
PTP4A1-203ENST00000473334 NKRFO15226 690 aaKnown RBP eCLIP26.13■■□□□ 1.774e-8■□□□□ 10.8
PTP4A1-203ENST00000473334 CABYRO75952 493 aa26.13■■□□□ 1.77
PTP4A1-203ENST00000473334 CALM1P0DP23 149 aa26.13■■□□□ 1.77
PTP4A1-203ENST00000473334 CALM2P0DP24 149 aa26.13■■□□□ 1.77
PTP4A1-203ENST00000473334 CALM3P0DP25 149 aa26.13■■□□□ 1.77
PTP4A1-203ENST00000473334 PPP2R5BQ15173 497 aa26.13■■□□□ 1.77
PTP4A1-203ENST00000473334 ARHGEF16Q5VV41 709 aa26.13■■□□□ 1.77
PTP4A1-203ENST00000473334 TRIM43Q96BQ3 446 aaPredicted RBP26.13■■□□□ 1.77
PTP4A1-203ENST00000473334 KIAA1217Q5T5P2 1943 aa26.13■■□□□ 1.77
PTP4A1-203ENST00000473334 ARVCFO00192 962 aa26.12■■□□□ 1.77
PTP4A1-203ENST00000473334 GNAQP50148 359 aa26.12■■□□□ 1.77
PTP4A1-203ENST00000473334 CDK7P50613 346 aa26.12■■□□□ 1.77
PTP4A1-203ENST00000473334 KRT32Q14532 448 aa26.12■■□□□ 1.77
PTP4A1-203ENST00000473334 CXCL17Q6UXB2 119 aa26.12■■□□□ 1.77
PTP4A1-203ENST00000473334 OR6J1Q8NGC5 347 aa26.12■■□□□ 1.77
PTP4A1-203ENST00000473334 LZTS2Q9BRK4 669 aa26.12■■□□□ 1.77
PTP4A1-203ENST00000473334 EIF2AK2P19525 551 aaKnown RBP26.11■■□□□ 1.77
PTP4A1-203ENST00000473334 SMARCA1P28370 1054 aa26.11■■□□□ 1.77
PTP4A1-203ENST00000473334 FAAP100Q0VG06 881 aa26.11■■□□□ 1.77
PTP4A1-203ENST00000473334 STXBP2Q15833 593 aa26.11■■□□□ 1.77
PTP4A1-203ENST00000473334 SGMS1Q86VZ5 419 aa26.11■■□□□ 1.77
PTP4A1-203ENST00000473334 RASEFQ8IZ41 740 aa26.11■■□□□ 1.77
PTP4A1-203ENST00000473334 PXMP2Q9NR77 195 aa26.11■■□□□ 1.77
PTP4A1-203ENST00000473334 SLC12A7Q9Y666 1083 aa26.11■■□□□ 1.77
PTP4A1-203ENST00000473334 KIAA0355O15063 1070 aa26.1■■□□□ 1.77
PTP4A1-203ENST00000473334 RXRAP19793 462 aa26.1■■□□□ 1.77
PTP4A1-203ENST00000473334 CPT1AP50416 773 aa26.1■■□□□ 1.77
PTP4A1-203ENST00000473334 TTLL4Q14679 1199 aa26.1■■□□□ 1.77
PTP4A1-203ENST00000473334 PIBF1Q8WXW3 757 aa26.1■■□□□ 1.77
PTP4A1-203ENST00000473334 BADQ92934 168 aa26.1■■□□□ 1.77
PTP4A1-203ENST00000473334 RRP36Q96EU6 259 aaKnown RBP26.1■■□□□ 1.77
PTP4A1-203ENST00000473334 TMEM39AQ9NV64 488 aa26.1■■□□□ 1.77
PTP4A1-203ENST00000473334 GCOM1H8Y6P7 765 aaPredicted RBP26.09■■□□□ 1.77
PTP4A1-203ENST00000473334 PLEKHA8P1O95397 391 aa26.09■■□□□ 1.77
PTP4A1-203ENST00000473334 POLR2MP0CAP2 368 aa26.09■■□□□ 1.77
PTP4A1-203ENST00000473334 TXNP10599 105 aaKnown RBP26.09■■□□□ 1.77
PTP4A1-203ENST00000473334 ADCK5Q3MIX3 580 aa26.09■■□□□ 1.77
PTP4A1-203ENST00000473334 ERICH6BQ5W0A0 696 aa26.09■■□□□ 1.77
PTP4A1-203ENST00000473334 DHX32Q7L7V1 743 aaKnown RBP26.09■■□□□ 1.77
PTP4A1-203ENST00000473334 NR3C2P08235 984 aa26.08■■□□□ 1.77
PTP4A1-203ENST00000473334 HOXA13P31271 388 aaPredicted RBP26.08■■□□□ 1.77
PTP4A1-203ENST00000473334 EXOSC10Q01780 885 aaKnown RBP26.08■■□□□ 1.77
PTP4A1-203ENST00000473334 RAB11FIP4Q86YS3 637 aa26.08■■□□□ 1.77
PTP4A1-203ENST00000473334 SRBD1Q8N5C6 995 aaKnown RBP26.08■■□□□ 1.77
PTP4A1-203ENST00000473334 SLC43A3Q8NBI5 491 aa26.08■■□□□ 1.77
PTP4A1-203ENST00000473334 COPS5Q92905 334 aa26.08■■□□□ 1.77
PTP4A1-203ENST00000473334 POLR3EQ9NVU0 708 aa26.08■■□□□ 1.77
PTP4A1-203ENST00000473334 PPP4R2Q9NY27 417 aa26.08■■□□□ 1.77
PTP4A1-203ENST00000473334 SEC63Q9UGP8 760 aaKnown RBP26.08■■□□□ 1.77
PTP4A1-203ENST00000473334 LAMA3Q16787 3333 aa26.08■■□□□ 1.76
PTP4A1-203ENST00000473334 SOX1O00570 391 aaPredicted RBP26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 TLR3O15455 904 aaKnown RBP26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 EIF3JO75822 258 aaKnown RBP26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 ARIH2O95376 493 aa26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 RAG1P15918 1043 aa26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 ITGA7Q13683 1181 aa26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 LRIT3Q3SXY7 679 aa26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 BRDTQ58F21 947 aaPredicted RBP26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 CCDC62Q6P9F0 684 aa26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 SYNE3Q6ZMZ3 975 aa26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 SEPT14Q6ZU15 432 aa26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 FAM126BQ8IXS8 530 aa26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 PDCD2LQ9BRP1 358 aa26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 SEZ6LQ9BYH1 1024 aa26.07■■□□□ 1.76
PTP4A1-203ENST00000473334 HMGB1P09429 215 aaKnown RBP26.06■■□□□ 1.76
PTP4A1-203ENST00000473334 ITGB8P26012 769 aa26.06■■□□□ 1.76
PTP4A1-203ENST00000473334 APOA5Q6Q788 366 aa26.06■■□□□ 1.76
PTP4A1-203ENST00000473334 MICU3Q86XE3 530 aa26.06■■□□□ 1.76
PTP4A1-203ENST00000473334 FANCBQ8NB91 859 aa26.06■■□□□ 1.76
PTP4A1-203ENST00000473334 KCNB2Q92953 911 aa26.06■■□□□ 1.76
PTP4A1-203ENST00000473334 TCEANC2Q96MN5 208 aa26.06■■□□□ 1.76
PTP4A1-203ENST00000473334 TBX21Q9UL17 535 aa26.06■■□□□ 1.76
PTP4A1-203ENST00000473334 REC8O95072 547 aa26.05■■□□□ 1.76
PTP4A1-203ENST00000473334 HSPA4P34932 840 aa26.05■■□□□ 1.76
PTP4A1-203ENST00000473334 TMTC3Q6ZXV5 915 aa26.05■■□□□ 1.76
PTP4A1-203ENST00000473334 CMTR1Q8N1G2 835 aaKnown RBP26.05■■□□□ 1.76
PTP4A1-203ENST00000473334 GRIN2DO15399 1336 aa26.05■■□□□ 1.76
PTP4A1-203ENST00000473334 SZT2Q5T011 3432 aa26.04■■□□□ 1.76
PTP4A1-203ENST00000473334 A6NJR5 290 aa26.04■■□□□ 1.76
PTP4A1-203ENST00000473334 CENPBP07199 599 aaPredicted RBP26.04■■□□□ 1.76
PTP4A1-203ENST00000473334 MYL3P08590 195 aa26.04■■□□□ 1.76
PTP4A1-203ENST00000473334 PSMC6P62333 389 aa26.04■■□□□ 1.76
PTP4A1-203ENST00000473334 PURAQ00577 322 aaKnown RBP26.04■■□□□ 1.76
PTP4A1-203ENST00000473334 PGM5Q15124 567 aa26.04■■□□□ 1.76
PTP4A1-203ENST00000473334 FCHSD1Q86WN1 690 aa26.04■■□□□ 1.76
PTP4A1-203ENST00000473334 LRCH3Q96II8 777 aa26.04■■□□□ 1.76
PTP4A1-203ENST00000473334 GH1P01241 217 aa26.03■■□□□ 1.76
PTP4A1-203ENST00000473334 CD4P01730 458 aa26.03■■□□□ 1.76
PTP4A1-203ENST00000473334 MYCLP12524 364 aaPredicted RBP26.03■■□□□ 1.76
PTP4A1-203ENST00000473334 LY6KQ17RY6 165 aa26.03■■□□□ 1.76
PTP4A1-203ENST00000473334 MTG1Q9BT17 334 aaPredicted RBP26.03■■□□□ 1.76
PTP4A1-203ENST00000473334 RBM28Q9NW13 759 aaKnown RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms