RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 DCAF15Q66K64 600 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 EP400NLQ6ZTU2 488 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 DIS3LQ8TF46 1054 aaKnown RBP11.29□□□□□ -0.6
APTX-216ENST00000472896 KAZALD1Q96I82 304 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 PAWRQ96IZ0 340 aaKnown RBP11.29□□□□□ -0.6
APTX-216ENST00000472896 GDF15Q99988 308 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 CRACR2AQ9BSW2 395 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 CAPS2Q9BXY5 557 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 GGA2Q9UJY4 613 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 CLIC4Q9Y696 253 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 TAF6LQ9Y6J9 622 aa11.29□□□□□ -0.6
APTX-216ENST00000472896 GRM8O00222 908 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 GCFC2P16383 781 aaKnown RBP11.28□□□□□ -0.6
APTX-216ENST00000472896 ZNF18P17022 549 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 FNTAP49354 379 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 BCAMP50895 628 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 IRX1P78414 480 aaPredicted RBP11.28□□□□□ -0.6
APTX-216ENST00000472896 EXOSC10Q01780 885 aaKnown RBP11.28□□□□□ -0.6
APTX-216ENST00000472896 G3BP1Q13283 466 aaKnown RBP eCLIP11.28□□□□□ -0.6
APTX-216ENST00000472896 WLSQ5T9L3 541 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 FBXW10Q5XX13 1052 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 WWC2Q6AWC2 1192 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 ZNF589Q86UQ0 364 aaPredicted RBP11.28□□□□□ -0.6
APTX-216ENST00000472896 PPFIBP1Q86W92 1011 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 CCDC50Q8IVM0 306 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 DEFB123Q8N688 67 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 MLKLQ8NB16 471 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 HOOK2Q96ED9 719 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 CRISPLD2Q9H0B8 497 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 PLEKHA4Q9H4M7 779 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 TMOD2Q9NZR1 351 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 KCNG1Q9UIX4 513 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 MYO6Q9UM54 1294 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 ALPK3Q96L96 1907 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 MGAMO43451 1857 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 GOLGA6CA6NDK9 693 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 GOLGA6DP0CG33 693 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 BMP8BP34820 402 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 MRPL12P52815 198 aaKnown RBP11.28□□□□□ -0.6
APTX-216ENST00000472896 ADKP55263 362 aaKnown RBP11.28□□□□□ -0.6
APTX-216ENST00000472896 SKOR1P84550 965 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 CKAP4Q07065 602 aaKnown RBP11.28□□□□□ -0.6
APTX-216ENST00000472896 TCP10Q12799 353 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 DRP2Q13474 957 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 NR1I3Q14994 352 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 SLC39A14Q15043 492 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 LRRC24Q50LG9 513 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 ZFPM1Q8IX07 1006 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 SLC35F6Q8N357 371 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 OTUD6BQ8N6M0 293 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 TRIML1Q8N9V2 468 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 MAGEC3Q8TD91 643 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 BCAS4Q8TDM0 211 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 FAM151AQ8WW52 585 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 SUCLG2Q96I99 432 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 CLIC6Q96NY7 704 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 DESI2Q9BSY9 194 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 KAT14Q9H8E8 782 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 LZTFL1Q9NQ48 299 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 GOLGA6AQ9NYA3 693 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 ZMYND8Q9ULU4 1186 aaPredicted RBP11.28□□□□□ -0.6
APTX-216ENST00000472896 CAPN7Q9Y6W3 813 aa11.28□□□□□ -0.6
APTX-216ENST00000472896 H0YHG0 523 aa11.27□□□□□ -0.61
APTX-216ENST00000472896 CXCL11O14625 94 aa11.27□□□□□ -0.61
APTX-216ENST00000472896 OPA1O60313 960 aa11.27□□□□□ -0.61
APTX-216ENST00000472896 ZEB2O60315 1214 aa11.27□□□□□ -0.61
APTX-216ENST00000472896 C11orf91Q3C1V1 193 aa11.27□□□□□ -0.61
APTX-216ENST00000472896 NOL9Q5SY16 702 aaKnown RBP11.27□□□□□ -0.61
APTX-216ENST00000472896 HHIPL2Q6UWX4 724 aa11.27□□□□□ -0.61
APTX-216ENST00000472896 VPS37DQ86XT2 251 aa11.27□□□□□ -0.61
APTX-216ENST00000472896 TEX11Q8IYF3 940 aa11.27□□□□□ -0.61
APTX-216ENST00000472896 C8orf76Q96K31 380 aa11.27□□□□□ -0.61
APTX-216ENST00000472896 PAK6Q9NQU5 681 aaPredicted RBP11.27□□□□□ -0.61
APTX-216ENST00000472896 MTMR10Q9NXD2 777 aa11.27□□□□□ -0.61
APTX-216ENST00000472896 DOCK3Q8IZD9 2030 aa11.27□□□□□ -0.61
APTX-216ENST00000472896 CUL9Q8IWT3 2517 aa11.27□□□□□ -0.61
APTX-216ENST00000472896 A0A1B0GTH6 734 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 MEFVO15553 781 aaPredicted RBP11.26□□□□□ -0.61
APTX-216ENST00000472896 CYP21A2P08686 494 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 PDIA3P30101 505 aaKnown RBP11.26□□□□□ -0.61
APTX-216ENST00000472896 FOSBP53539 338 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 AMPD2Q01433 879 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 NFIAQ12857 509 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 MCMDC2Q4G0Z9 681 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 CCDC102BQ68D86 513 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 CDC42EP5Q6NZY7 148 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 RAD9BQ6WBX8 426 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 TMTC1Q8IUR5 882 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 CNGA4Q8IV77 575 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 C7orf61Q8IZ16 206 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 EAF2Q96CJ1 260 aaPredicted RBP11.26□□□□□ -0.61
APTX-216ENST00000472896 PARK7Q99497 189 aaKnown RBP11.26□□□□□ -0.61
APTX-216ENST00000472896 SH3GL2Q99962 352 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 JPH2Q9BR39 696 aaPredicted RBP11.26□□□□□ -0.61
APTX-216ENST00000472896 COL25A1Q9BXS0 654 aaPredicted RBP11.26□□□□□ -0.61
APTX-216ENST00000472896 BOLA2Q9H3K6 86 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 STXBP5LQ9Y2K9 1186 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 SOWAHDA6NJG2 315 aa11.26□□□□□ -0.61
APTX-216ENST00000472896 SRRM3A6NNA2 597 aaPredicted RBP11.26□□□□□ -0.61
APTX-216ENST00000472896 PHF20L1A8MW92 1017 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms