RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 DUSP28Q4G0W2 176 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 TAPT1Q6NXT6 567 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 MRPL50Q8N5N7 158 aaKnown RBP7.06□□□□□ -1.28
SIK3-208ENST00000472648 TMEM105Q8N8V8 129 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 OR6J1Q8NGC5 347 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 SP7Q8TDD2 431 aaPredicted RBP7.06□□□□□ -1.28
SIK3-208ENST00000472648 KCNG4Q8TDN1 519 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 PPP2R3CQ969Q6 453 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 RPGRIP1Q96KN7 1286 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 CCDC17Q96LX7 622 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 NUP88Q99567 741 aaPredicted RBP7.06□□□□□ -1.28
SIK3-208ENST00000472648 HINFPQ9BQA5 517 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 CRNKL1Q9BZJ0 848 aaKnown RBP7.06□□□□□ -1.28
SIK3-208ENST00000472648 LMAN2LQ9H0V9 348 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 ACAD9Q9H845 621 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 VTA1Q9NP79 307 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 PIH1D3Q9NQM4 214 aaKnown RBP7.06□□□□□ -1.28
SIK3-208ENST00000472648 INCENPQ9NQS7 918 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 FAM208BQ5VWN6 2430 aa7.06□□□□□ -1.28
SIK3-208ENST00000472648 CHD8Q9HCK8 2581 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 LINC01565O15544 149 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 KPNA6O60684 536 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 NBNO60934 754 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 CKBP12277 381 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 GTF2F1P35269 517 aaKnown RBP eCLIP7.05□□□□□ -1.28
SIK3-208ENST00000472648 ZAP70P43403 619 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 OAZ1P54368 228 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 ACAP1Q15027 740 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 TCTN1Q2MV58 587 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 TMEM63BQ5T3F8 832 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.05□□□□□ -1.28
SIK3-208ENST00000472648 SMRP1Q8NCR6 262 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 KIFC2Q96AC6 838 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 DYNLL2Q96FJ2 89 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 MSLNLQ96KJ4 702 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 C11orf84Q9BUA3 381 aaPredicted RBP7.05□□□□□ -1.28
SIK3-208ENST00000472648 PHF7Q9BWX1 381 aaPredicted RBP7.05□□□□□ -1.28
SIK3-208ENST00000472648 KANSL2Q9H9L4 492 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 DDX49Q9Y6V7 483 aaKnown RBP7.05□□□□□ -1.28
SIK3-208ENST00000472648 RALGAPA1Q6GYQ0 2036 aa7.05□□□□□ -1.28
SIK3-208ENST00000472648 MAGEB6P1A0A0J9YX57 407 aa7.04□□□□□ -1.28
SIK3-208ENST00000472648 UPP2O95045 317 aa7.04□□□□□ -1.28
SIK3-208ENST00000472648 CYP2D6P10635 497 aa7.04□□□□□ -1.28
SIK3-208ENST00000472648 RRP1P56182 461 aaKnown RBP7.04□□□□□ -1.28
SIK3-208ENST00000472648 DDX10Q13206 875 aaKnown RBP7.04□□□□□ -1.28
SIK3-208ENST00000472648 G3BP1Q13283 466 aaKnown RBP eCLIP7.04□□□□□ -1.28
SIK3-208ENST00000472648 ADAM15Q13444 863 aa7.04□□□□□ -1.28
SIK3-208ENST00000472648 GPNMBQ14956 572 aa7.04□□□□□ -1.28
SIK3-208ENST00000472648 TMED8Q6PL24 325 aaPredicted RBP7.04□□□□□ -1.28
SIK3-208ENST00000472648 AMOTL1Q8IY63 956 aa7.04□□□□□ -1.28
SIK3-208ENST00000472648 CHAMP1Q96JM3 812 aa7.04□□□□□ -1.28
SIK3-208ENST00000472648 WDR11Q9BZH6 1224 aa7.04□□□□□ -1.28
SIK3-208ENST00000472648 MFSD1Q9H3U5 465 aa7.04□□□□□ -1.28
SIK3-208ENST00000472648 PRKRIP1Q9H875 184 aaPredicted RBP7.04□□□□□ -1.28
SIK3-208ENST00000472648 SLC38A10Q9HBR0 1119 aa7.04□□□□□ -1.28
SIK3-208ENST00000472648 A1CFQ9NQ94 594 aaKnown RBP7.04□□□□□ -1.28
SIK3-208ENST00000472648 RNF146Q9NTX7 359 aa7.04□□□□□ -1.28
SIK3-208ENST00000472648 USP15Q9Y4E8 981 aaPredicted RBP7.04□□□□□ -1.28
SIK3-208ENST00000472648 EMSYQ7Z589 1322 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 SPTBN2O15020 2390 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 DENND4AQ7Z401 1863 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 ANKRD11Q6UB99 2663 aaPredicted RBP7.03□□□□□ -1.28
SIK3-208ENST00000472648 GRM6O15303 877 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 LGR5O75473 907 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 LMNAP02545 664 aaKnown RBP7.03□□□□□ -1.28
SIK3-208ENST00000472648 RBL2Q08999 1139 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 COASYQ13057 564 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 MTMR3Q13615 1198 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 ASTLQ6HA08 431 aaPredicted RBP7.03□□□□□ -1.28
SIK3-208ENST00000472648 GDF6Q6KF10 455 aaPredicted RBP7.03□□□□□ -1.28
SIK3-208ENST00000472648 UBALD2Q8IYN6 164 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 FIBCD1Q8N539 461 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 SDR42E1Q8WUS8 393 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 ZNF512BQ96KM6 892 aaPredicted RBP7.03□□□□□ -1.28
SIK3-208ENST00000472648 DBNDD2Q9BQY9 259 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 RIOK1Q9BRS2 568 aaKnown RBP7.03□□□□□ -1.28
SIK3-208ENST00000472648 DLL3Q9NYJ7 618 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 RWDD3Q9Y3V2 267 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 PCDHGC5Q9Y5F6 944 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 TTC3P53804 2025 aa7.03□□□□□ -1.28
SIK3-208ENST00000472648 FNDC1Q4ZHG4 1894 aaPredicted RBP7.02□□□□□ -1.28
SIK3-208ENST00000472648 DOCK5Q9H7D0 1870 aa7.02□□□□□ -1.28
SIK3-208ENST00000472648 C5orf67F2Z3F1 127 aa7.02□□□□□ -1.29
SIK3-208ENST00000472648 NKRFO15226 690 aaKnown RBP eCLIP7.02□□□□□ -1.29
SIK3-208ENST00000472648 NDUFB10O96000 172 aa7.02□□□□□ -1.29
SIK3-208ENST00000472648 MMP1P03956 469 aa7.02□□□□□ -1.29
SIK3-208ENST00000472648 RB1P06400 928 aa7.02□□□□□ -1.29
SIK3-208ENST00000472648 CDK8P49336 464 aa7.02□□□□□ -1.29
SIK3-208ENST00000472648 PPP2R5BQ15173 497 aa7.02□□□□□ -1.29
SIK3-208ENST00000472648 TNNI3KQ59H18 835 aa7.02□□□□□ -1.29
SIK3-208ENST00000472648 SESTD1Q86VW0 696 aa7.02□□□□□ -1.29
SIK3-208ENST00000472648 KREMEN2Q8NCW0 462 aa7.02□□□□□ -1.29
SIK3-208ENST00000472648 DHX38Q92620 1227 aaKnown RBP7.02□□□□□ -1.29
SIK3-208ENST00000472648 MEIS3Q99687 375 aa7.02□□□□□ -1.29
SIK3-208ENST00000472648 HAUS7Q99871 368 aa7.02□□□□□ -1.29
SIK3-208ENST00000472648 IFIH1Q9BYX4 1025 aaKnown RBP7.02□□□□□ -1.29
SIK3-208ENST00000472648 SEMA4AQ9H3S1 761 aa7.02□□□□□ -1.29
SIK3-208ENST00000472648 DCP1AQ9NPI6 582 aaPredicted RBP7.02□□□□□ -1.29
SIK3-208ENST00000472648 CLEC1BQ9P126 229 aa7.02□□□□□ -1.29
SIK3-208ENST00000472648 ADD3Q9UEY8 706 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms