RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 C7orf61Q8IZ16 206 aa17.47■□□□□ 0.39
CALD1-215ENST00000472096 TBC1D5Q92609 795 aa17.47■□□□□ 0.39
CALD1-215ENST00000472096 VTA1Q9NP79 307 aa17.47■□□□□ 0.39
CALD1-215ENST00000472096 COL20A1Q9P218 1284 aa17.47■□□□□ 0.39
CALD1-215ENST00000472096 PCDHA1Q9Y5I3 950 aa17.47■□□□□ 0.39
CALD1-215ENST00000472096 PNMA6FA0A0J9YX94 578 aa17.46■□□□□ 0.39
CALD1-215ENST00000472096 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.46■□□□□ 0.39
CALD1-215ENST00000472096 PLEKHA8P1O95397 391 aa17.46■□□□□ 0.39
CALD1-215ENST00000472096 EDNRBP24530 442 aa17.46■□□□□ 0.39
CALD1-215ENST00000472096 ADCYAP1R1P41586 468 aa17.46■□□□□ 0.39
CALD1-215ENST00000472096 GNAQP50148 359 aa17.46■□□□□ 0.39
CALD1-215ENST00000472096 GHRHRQ02643 423 aa17.46■□□□□ 0.39
CALD1-215ENST00000472096 APOA5Q6Q788 366 aa17.46■□□□□ 0.39
CALD1-215ENST00000472096 EEPD1Q7L9B9 569 aa17.46■□□□□ 0.39
CALD1-215ENST00000472096 PDCD7Q8N8D1 485 aaKnown RBP17.46■□□□□ 0.39
CALD1-215ENST00000472096 SYTL5Q8TDW5 730 aaPredicted RBP17.46■□□□□ 0.39
CALD1-215ENST00000472096 JAKMIP1Q96N16 626 aaKnown RBP17.46■□□□□ 0.39
CALD1-215ENST00000472096 UPF3AQ9H1J1 476 aaKnown RBP17.46■□□□□ 0.39
CALD1-215ENST00000472096 PHF24Q9UPV7 400 aa17.46■□□□□ 0.39
CALD1-215ENST00000472096 MYADML2A6NDP7 307 aa17.45■□□□□ 0.38
CALD1-215ENST00000472096 CPA1P15085 419 aa17.45■□□□□ 0.38
CALD1-215ENST00000472096 CST5P28325 142 aaPredicted RBP17.45■□□□□ 0.38
CALD1-215ENST00000472096 SMARCA1P28370 1054 aa17.45■□□□□ 0.38
CALD1-215ENST00000472096 TNFAIP2Q03169 654 aa17.45■□□□□ 0.38
CALD1-215ENST00000472096 TRAF1Q13077 416 aa17.45■□□□□ 0.38
CALD1-215ENST00000472096 TAPT1Q6NXT6 567 aa17.45■□□□□ 0.38
CALD1-215ENST00000472096 KLHDC9Q8NEP7 349 aa17.45■□□□□ 0.38
CALD1-215ENST00000472096 MPHOSPH6Q99547 160 aaKnown RBP17.45■□□□□ 0.38
CALD1-215ENST00000472096 LZTS2Q9BRK4 669 aa17.45■□□□□ 0.38
CALD1-215ENST00000472096 OCEL1Q9H607 264 aa17.45■□□□□ 0.38
CALD1-215ENST00000472096 PDGFCQ9NRA1 345 aa17.45■□□□□ 0.38
CALD1-215ENST00000472096 CFBP00751 764 aa17.44■□□□□ 0.38
CALD1-215ENST00000472096 HSD17B4P51659 736 aa17.44■□□□□ 0.38
CALD1-215ENST00000472096 GJA9P57773 515 aa17.44■□□□□ 0.38
CALD1-215ENST00000472096 PDE4DQ08499 809 aa17.44■□□□□ 0.38
CALD1-215ENST00000472096 BLOC1S2Q6QNY1 142 aa17.44■□□□□ 0.38
CALD1-215ENST00000472096 TMTC3Q6ZXV5 915 aa17.44■□□□□ 0.38
CALD1-215ENST00000472096 SRBD1Q8N5C6 995 aaKnown RBP17.44■□□□□ 0.38
CALD1-215ENST00000472096 FANCBQ8NB91 859 aa17.44■□□□□ 0.38
CALD1-215ENST00000472096 PIBF1Q8WXW3 757 aa17.44■□□□□ 0.38
CALD1-215ENST00000472096 RRP36Q96EU6 259 aaKnown RBP17.44■□□□□ 0.38
CALD1-215ENST00000472096 TAAR1Q96RJ0 339 aa17.44■□□□□ 0.38
CALD1-215ENST00000472096 GNEQ9Y223 722 aaKnown RBP17.44■□□□□ 0.38
CALD1-215ENST00000472096 MYH7BA7E2Y1 1941 aa17.43■□□□□ 0.38
CALD1-215ENST00000472096 A0A1W2PQ45 241 aaPredicted RBP17.43■□□□□ 0.38
CALD1-215ENST00000472096 A0A1W2PQY0 241 aa17.43■□□□□ 0.38
CALD1-215ENST00000472096 C6orf222P0C671 652 aaPredicted RBP17.43■□□□□ 0.38
CALD1-215ENST00000472096 SMPD1P17405 629 aa17.43■□□□□ 0.38
CALD1-215ENST00000472096 RTP1P59025 263 aa17.43■□□□□ 0.38
CALD1-215ENST00000472096 SNX17Q15036 470 aa17.43■□□□□ 0.38
CALD1-215ENST00000472096 CCSAPQ6IQ19 270 aaPredicted RBP17.43■□□□□ 0.38
CALD1-215ENST00000472096 SYNE3Q6ZMZ3 975 aa17.43■□□□□ 0.38
CALD1-215ENST00000472096 TLK2Q86UE8 772 aa17.43■□□□□ 0.38
CALD1-215ENST00000472096 CMTR1Q8N1G2 835 aaKnown RBP17.43■□□□□ 0.38
CALD1-215ENST00000472096 FERMT2Q96AC1 680 aa17.43■□□□□ 0.38
CALD1-215ENST00000472096 TSEN34Q9BSV6 310 aaKnown RBP17.43■□□□□ 0.38
CALD1-215ENST00000472096 USP26Q9BXU7 913 aa17.43■□□□□ 0.38
CALD1-215ENST00000472096 SPC25Q9HBM1 224 aa17.43■□□□□ 0.38
CALD1-215ENST00000472096 SEC63Q9UGP8 760 aaKnown RBP17.43■□□□□ 0.38
CALD1-215ENST00000472096 BRPF3Q9ULD4 1205 aa17.43■□□□□ 0.38
CALD1-215ENST00000472096 KLF18A0A0U1RQI7 1052 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 RBM47A0AV96 593 aaKnown RBP17.42■□□□□ 0.38
CALD1-215ENST00000472096 MOXD2PA6NHM9 499 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 B4DLN1 442 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 CTAGE5O15320 804 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 ZBTB43O43298 467 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 PTGS1P23219 599 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 RPS6KB1P23443 525 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 MRPL12P52815 198 aaKnown RBP17.42■□□□□ 0.38
CALD1-215ENST00000472096 ACLYP53396 1101 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 NKX3-2P78367 333 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 IQSEC1Q6DN90 963 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 SLC39A5Q6ZMH5 540 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 NOL8Q76FK4 1167 aaKnown RBP17.42■□□□□ 0.38
CALD1-215ENST00000472096 SAMD3Q8N6K7 520 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 NSUN6Q8TEA1 469 aaKnown RBP17.42■□□□□ 0.38
CALD1-215ENST00000472096 RMDN3Q96TC7 470 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 RBM28Q9NW13 759 aaKnown RBP17.42■□□□□ 0.38
CALD1-215ENST00000472096 MAP3K20Q9NYL2 800 aaKnown RBP17.42■□□□□ 0.38
CALD1-215ENST00000472096 ZMYND8Q9ULU4 1186 aaPredicted RBP17.42■□□□□ 0.38
CALD1-215ENST00000472096 CNTNAP5Q8WYK1 1306 aa17.42■□□□□ 0.38
CALD1-215ENST00000472096 CASTP20810 708 aaKnown RBP17.41■□□□□ 0.38
CALD1-215ENST00000472096 HOXA13P31271 388 aaPredicted RBP17.41■□□□□ 0.38
CALD1-215ENST00000472096 RCAN1P53805 252 aa17.41■□□□□ 0.38
CALD1-215ENST00000472096 FGD1P98174 961 aa17.41■□□□□ 0.38
CALD1-215ENST00000472096 RTN1Q16799 776 aa17.41■□□□□ 0.38
CALD1-215ENST00000472096 TMEM63BQ5T3F8 832 aa17.41■□□□□ 0.38
CALD1-215ENST00000472096 Q6ZUG5 572 aa17.41■□□□□ 0.38
CALD1-215ENST00000472096 PCSK9Q8NBP7 692 aaKnown RBP17.41■□□□□ 0.38
CALD1-215ENST00000472096 PXMP2Q9NR77 195 aa17.41■□□□□ 0.38
CALD1-215ENST00000472096 NID2Q14112 1375 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 DOCK5Q9H7D0 1870 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 GOLGA8AA7E2F4 631 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 GOLGA8BA8MQT2 603 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 GCOM1H8Y6P7 765 aaPredicted RBP17.4■□□□□ 0.38
CALD1-215ENST00000472096 POLR2MP0CAP2 368 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 EIF2AK2P19525 551 aaKnown RBP17.4■□□□□ 0.38
CALD1-215ENST00000472096 PSMA5P28066 241 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 KCNA10Q16322 511 aa17.4■□□□□ 0.38
CALD1-215ENST00000472096 TRIM60Q495X7 471 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms