RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 ZWILCHQ9H900 591 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 TMOD3Q9NYL9 352 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 MYH8P13535 1937 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 ANKRD36CQ5JPF3 1778 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 ITGB4P16144 1822 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 CARMIL3Q8ND23 1372 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 PENKP01210 267 aaPredicted RBP11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 KCNA3P22001 575 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 GNAQP50148 359 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 ERVK-24P63145 666 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 PNOCQ13519 176 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 MYBPC3Q14896 1274 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 NT5DC1Q5TFE4 455 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 AACSQ86V21 672 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 METTL16Q86W50 562 aaKnown RBP11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 CCDC63Q8NA47 563 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 JAKMIP2Q96AA8 810 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 RANBP17Q9H2T7 1088 aaKnown RBP11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 CCDC88AQ3V6T2 1871 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 DPPA5A6NC42 116 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 POTECB2RU33 542 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 IFIT3O14879 490 aaKnown RBP11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 SEMA3EO15041 775 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 CDC27P30260 824 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 KIF5BP33176 963 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 PDE6BP35913 854 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 PSMC4P43686 418 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 LMNB2Q03252 620 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 IFI16Q16666 785 aaKnown RBP11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 PABPC1LQ4VXU2 614 aaKnown RBP11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 KCTD16Q68DU8 428 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 TRIML1Q8N9V2 468 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 ISCA1Q9BUE6 129 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 AGXT2Q9BYV1 514 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 HDAC6Q9UBN7 1215 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 SLC12A6Q9UHW9 1150 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 TAOK2Q9UL54 1235 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 L3MBTL1Q9Y468 752 aa11.88□□□□□ -0.51
CHMP2B-203ENST00000471660 KIF4AO95239 1232 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 KRT14P02533 472 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 ANXA1P04083 346 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 GYPCP04921 128 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 LMNB1P20700 586 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 ERCC5P28715 1186 aaPredicted RBP11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 AIMP1Q12904 312 aaKnown RBP11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 CFAP58Q5T655 872 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 GKAP1Q5VSY0 366 aaPredicted RBP11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 APBB1IPQ7Z5R6 666 aaPredicted RBP11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 FAM227BQ96M60 508 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 CTAGE1Q96RT6 745 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 RMI1Q9H9A7 625 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 GMEB1Q9Y692 573 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 SCN4AP35499 1836 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 CCT8L1PA6NM43 557 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 PDE2AO00408 941 aaPredicted RBP11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 N4BP3O15049 544 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 PPP6R2O75170 966 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 TRIM14Q14142 442 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 SLC39A14Q15043 492 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 ANO1Q5XXA6 986 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 ARMCX6Q7L4S7 300 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 STIM2Q9P246 746 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 ADD3Q9UEY8 706 aaKnown RBP11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 C2CD2Q9Y426 696 aa11.87□□□□□ -0.51
CHMP2B-203ENST00000471660 A0A087WZG4 1122 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 PRAMEF22A3QJZ6 481 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 ERVV-1B6SEH8 477 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 MYL6BP14649 208 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 CASP14P31944 242 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 MXRA7P84157 204 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 MDM2Q00987 491 aaPredicted RBP11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 PTPN12Q05209 780 aaKnown RBP11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 QPCTQ16769 361 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 ANKRD20A2Q5SQ80 823 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 ANKRD20A1Q5TYW2 823 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 ANKRD20A3Q5VUR7 823 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 CAGE1Q8TC20 777 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 SMCR8Q8TEV9 937 aaPredicted RBP11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 NAF1Q96HR8 494 aaKnown RBP11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 TRIM7Q9C029 511 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 ABHD10Q9NUJ1 306 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 ZNF510Q9Y2H8 683 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 PCDHA5Q9Y5H7 936 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 RBM47A0AV96 593 aaKnown RBP11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 TEX33O43247 280 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 PCCAP05165 728 aaPredicted RBP11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 CDC25CP30307 473 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 PAK2Q13177 524 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 TCIRG1Q13488 830 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 RESP18Q5W5W9 173 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 KIF6Q6ZMV9 814 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 SESTD1Q86VW0 696 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 AMIGO3Q86WK7 504 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 FOXP4Q8IVH2 680 aaPredicted RBP11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 TRAPPC9Q96Q05 1148 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 PPANQ9NQ55 473 aaKnown RBP11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 PCMTD2Q9NV79 361 aa11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 DMGDHQ9UI17 866 aaKnown RBP11.86□□□□□ -0.51
CHMP2B-203ENST00000471660 REXO2Q9Y3B8 237 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms