RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 ZNF654Q8IZM8 581 aa27.17■■□□□ 1.94
RNF220-208ENST00000471494 CTCFLQ8NI51 663 aaPredicted RBP27.17■■□□□ 1.94
RNF220-208ENST00000471494 PIGSQ96S52 555 aa27.17■■□□□ 1.94
RNF220-208ENST00000471494 TBX21Q9UL17 535 aa27.17■■□□□ 1.94
RNF220-208ENST00000471494 CDC45O75419 566 aa27.16■■□□□ 1.94
RNF220-208ENST00000471494 DDAH1O94760 285 aa27.16■■□□□ 1.94
RNF220-208ENST00000471494 ITGA7Q13683 1181 aa27.16■■□□□ 1.94
RNF220-208ENST00000471494 TTLL4Q14679 1199 aa27.16■■□□□ 1.94
RNF220-208ENST00000471494 SLC35G1Q2M3R5 365 aa27.16■■□□□ 1.94
RNF220-208ENST00000471494 ARHGEF16Q5VV41 709 aa27.16■■□□□ 1.94
RNF220-208ENST00000471494 GPR153Q6NV75 609 aa27.16■■□□□ 1.94
RNF220-208ENST00000471494 TMEM87BQ96K49 555 aa27.16■■□□□ 1.94
RNF220-208ENST00000471494 IWS1Q96ST2 819 aa27.16■■□□□ 1.94
RNF220-208ENST00000471494 POLR3EQ9NVU0 708 aa27.16■■□□□ 1.94
RNF220-208ENST00000471494 OPLAHO14841 1288 aa27.15■■□□□ 1.94
RNF220-208ENST00000471494 CYTH3O43739 400 aa27.15■■□□□ 1.94
RNF220-208ENST00000471494 TXNP10599 105 aaKnown RBP27.15■■□□□ 1.94
RNF220-208ENST00000471494 EIF2AK2P19525 551 aaKnown RBP27.15■■□□□ 1.94
RNF220-208ENST00000471494 KIF5BP33176 963 aa27.15■■□□□ 1.94
RNF220-208ENST00000471494 HSD17B4P51659 736 aa27.15■■□□□ 1.94
RNF220-208ENST00000471494 FPGSQ05932 587 aa27.15■■□□□ 1.94
RNF220-208ENST00000471494 SHHQ15465 462 aa27.15■■□□□ 1.94
RNF220-208ENST00000471494 BRDTQ58F21 947 aaPredicted RBP27.15■■□□□ 1.94
RNF220-208ENST00000471494 RNF20Q5VTR2 975 aa27.15■■□□□ 1.94
RNF220-208ENST00000471494 NFXL1Q6ZNB6 911 aa27.15■■□□□ 1.94
RNF220-208ENST00000471494 MAP3K14Q99558 947 aa27.15■■□□□ 1.94
RNF220-208ENST00000471494 GPHNQ9NQX3 736 aaPredicted RBP27.15■■□□□ 1.94
RNF220-208ENST00000471494 PNMA6FA0A0J9YX94 578 aa27.14■■□□□ 1.94
RNF220-208ENST00000471494 SH2B2O14492 632 aaPredicted RBP27.14■■□□□ 1.94
RNF220-208ENST00000471494 TIMP1P01033 207 aa27.14■■□□□ 1.94
RNF220-208ENST00000471494 GHRHRQ02643 423 aa27.14■■□□□ 1.94
RNF220-208ENST00000471494 STXBP2Q15833 593 aa27.14■■□□□ 1.94
RNF220-208ENST00000471494 C9orf50Q5SZB4 431 aa27.14■■□□□ 1.94
RNF220-208ENST00000471494 TMTC2Q8N394 836 aa27.14■■□□□ 1.94
RNF220-208ENST00000471494 SLC43A3Q8NBI5 491 aa27.14■■□□□ 1.94
RNF220-208ENST00000471494 MYL10Q9BUA6 226 aa27.14■■□□□ 1.94
RNF220-208ENST00000471494 SEZ6LQ9BYH1 1024 aa27.14■■□□□ 1.94
RNF220-208ENST00000471494 MAP3K20Q9NYL2 800 aaKnown RBP27.14■■□□□ 1.94
RNF220-208ENST00000471494 SCN10AQ9Y5Y9 1956 aa27.13■■□□□ 1.93
RNF220-208ENST00000471494 CCDC69A6NI79 296 aa27.13■■□□□ 1.93
RNF220-208ENST00000471494 MYL3P08590 195 aa27.13■■□□□ 1.93
RNF220-208ENST00000471494 PSMC6P62333 389 aa27.13■■□□□ 1.93
RNF220-208ENST00000471494 SAMD3Q8N6K7 520 aa27.13■■□□□ 1.93
RNF220-208ENST00000471494 PXMP2Q9NR77 195 aa27.13■■□□□ 1.93
RNF220-208ENST00000471494 MYH7BA7E2Y1 1941 aa27.12■■□□□ 1.93
RNF220-208ENST00000471494 ARIH2O95376 493 aa27.12■■□□□ 1.93
RNF220-208ENST00000471494 PURAQ00577 322 aaKnown RBP27.12■■□□□ 1.93
RNF220-208ENST00000471494 SEPT14Q6ZU15 432 aa27.12■■□□□ 1.93
RNF220-208ENST00000471494 PIBF1Q8WXW3 757 aa27.12■■□□□ 1.93
RNF220-208ENST00000471494 COPS5Q92905 334 aa27.12■■□□□ 1.93
RNF220-208ENST00000471494 GRIN2DO15399 1336 aa27.12■■□□□ 1.93
RNF220-208ENST00000471494 CD4P01730 458 aa27.11■■□□□ 1.93
RNF220-208ENST00000471494 HOXA13P31271 388 aaPredicted RBP27.11■■□□□ 1.93
RNF220-208ENST00000471494 SPZ1Q9BXG8 430 aa27.11■■□□□ 1.93
RNF220-208ENST00000471494 NEFLP07196 543 aa27.1■■□□□ 1.93
RNF220-208ENST00000471494 NR3C2P08235 984 aa27.1■■□□□ 1.93
RNF220-208ENST00000471494 CALM1P0DP23 149 aa27.1■■□□□ 1.93
RNF220-208ENST00000471494 CALM2P0DP24 149 aa27.1■■□□□ 1.93
RNF220-208ENST00000471494 CALM3P0DP25 149 aa27.1■■□□□ 1.93
RNF220-208ENST00000471494 LIFRP42702 1097 aa27.1■■□□□ 1.93
RNF220-208ENST00000471494 COL9A3Q14050 684 aaPredicted RBP27.1■■□□□ 1.93
RNF220-208ENST00000471494 MFSD5Q6N075 450 aa27.1■■□□□ 1.93
RNF220-208ENST00000471494 CCDC62Q6P9F0 684 aa27.1■■□□□ 1.93
RNF220-208ENST00000471494 DEFB123Q8N688 67 aa27.1■■□□□ 1.93
RNF220-208ENST00000471494 LZTS2Q9BRK4 669 aa27.1■■□□□ 1.93
RNF220-208ENST00000471494 MTG1Q9BT17 334 aaPredicted RBP27.1■■□□□ 1.93
RNF220-208ENST00000471494 PPP1R12CQ9BZL4 782 aa27.1■■□□□ 1.93
RNF220-208ENST00000471494 A6NJR5 290 aa27.09■■□□□ 1.93
RNF220-208ENST00000471494 GCOM1H8Y6P7 765 aaPredicted RBP27.09■■□□□ 1.93
RNF220-208ENST00000471494 KPNA6O60684 536 aa27.09■■□□□ 1.93
RNF220-208ENST00000471494 EIF3JO75822 258 aaKnown RBP27.09■■□□□ 1.93
RNF220-208ENST00000471494 POLR2MP0CAP2 368 aa27.09■■□□□ 1.93
RNF220-208ENST00000471494 GNAQP50148 359 aa27.09■■□□□ 1.93
RNF220-208ENST00000471494 EPHB4P54760 987 aa27.09■■□□□ 1.93
RNF220-208ENST00000471494 RRP36Q96EU6 259 aaKnown RBP27.09■■□□□ 1.93
RNF220-208ENST00000471494 SEC63Q9UGP8 760 aaKnown RBP27.09■■□□□ 1.93
RNF220-208ENST00000471494 SLC12A7Q9Y666 1083 aa27.09■■□□□ 1.93
RNF220-208ENST00000471494 GH1P01241 217 aa27.08■■□□□ 1.93
RNF220-208ENST00000471494 PPIGQ13427 754 aaKnown RBP eCLIP27.08■■□□□ 1.934e-7■□□□□ 9.5
RNF220-208ENST00000471494 TMEM199Q8N511 208 aa27.08■■□□□ 1.93
RNF220-208ENST00000471494 RNPC3Q96LT9 517 aaKnown RBP27.08■■□□□ 1.93
RNF220-208ENST00000471494 PDCD2LQ9BRP1 358 aa27.08■■□□□ 1.93
RNF220-208ENST00000471494 LRRC2Q9BYS8 371 aa27.08■■□□□ 1.93
RNF220-208ENST00000471494 TRPV6Q9H1D0 765 aa27.08■■□□□ 1.93
RNF220-208ENST00000471494 MYCLP12524 364 aaPredicted RBP27.07■■□□□ 1.92
RNF220-208ENST00000471494 SMARCA1P28370 1054 aa27.07■■□□□ 1.92
RNF220-208ENST00000471494 LY6KQ17RY6 165 aa27.07■■□□□ 1.92
RNF220-208ENST00000471494 Q7L0L9 218 aa27.07■■□□□ 1.92
RNF220-208ENST00000471494 FCHSD1Q86WN1 690 aa27.07■■□□□ 1.92
RNF220-208ENST00000471494 ALDH8A1Q9H2A2 487 aaPredicted RBP27.07■■□□□ 1.92
RNF220-208ENST00000471494 HIPK3Q9H422 1215 aa27.07■■□□□ 1.92
RNF220-208ENST00000471494 MRVI1Q9Y6F6 885 aa27.07■■□□□ 1.92
RNF220-208ENST00000471494 LAMA2P24043 3122 aaKnown RBP27.06■■□□□ 1.92
RNF220-208ENST00000471494 B4GALT4O60513 344 aa27.06■■□□□ 1.92
RNF220-208ENST00000471494 RXRAP19793 462 aa27.06■■□□□ 1.92
RNF220-208ENST00000471494 NEK1Q96PY6 1258 aa27.06■■□□□ 1.92
RNF220-208ENST00000471494 PLEKHA8P1O95397 391 aa27.05■■□□□ 1.92
RNF220-208ENST00000471494 ARHGAP1Q07960 439 aa27.05■■□□□ 1.92
RNF220-208ENST00000471494 PGM5Q15124 567 aa27.05■■□□□ 1.92
RNF220-208ENST00000471494 FAM47CQ5HY64 1035 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms