RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 MYL10Q9BUA6 226 aa17.88■□□□□ 0.45
COL1A1-203ENST00000471344 MRPL11Q9Y3B7 192 aaKnown RBP17.88■□□□□ 0.45
COL1A1-203ENST00000471344 KIAA1217Q5T5P2 1943 aa17.88■□□□□ 0.45
COL1A1-203ENST00000471344 ZEB2O60315 1214 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 CABYRO75952 493 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 CFBP00751 764 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 ACRP10323 421 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 EIF2AK2P19525 551 aaKnown RBP17.87■□□□□ 0.45
COL1A1-203ENST00000471344 PURAQ00577 322 aaKnown RBP17.87■□□□□ 0.45
COL1A1-203ENST00000471344 TROAPQ12815 778 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 TMEM67Q5HYA8 995 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 FAM109BQ6ICB4 259 aaPredicted RBP17.87■□□□□ 0.45
COL1A1-203ENST00000471344 MFSD5Q6N075 450 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 IGDCC4Q8TDY8 1250 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 SCFD2Q8WU76 684 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 PIGSQ96S52 555 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 RMDN3Q96TC7 470 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.87■□□□□ 0.45
COL1A1-203ENST00000471344 ESYT1Q9BSJ8 1104 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 AMNQ9BXJ7 453 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 CHD9Q3L8U1 2897 aa17.87■□□□□ 0.45
COL1A1-203ENST00000471344 SCN10AQ9Y5Y9 1956 aa17.86■□□□□ 0.45
COL1A1-203ENST00000471344 ZBTB5O15062 677 aa17.86■□□□□ 0.45
COL1A1-203ENST00000471344 TLR3O15455 904 aaKnown RBP17.86■□□□□ 0.45
COL1A1-203ENST00000471344 TXNP10599 105 aaKnown RBP17.86■□□□□ 0.45
COL1A1-203ENST00000471344 HOXA13P31271 388 aaPredicted RBP17.86■□□□□ 0.45
COL1A1-203ENST00000471344 LY6KQ17RY6 165 aa17.86■□□□□ 0.45
COL1A1-203ENST00000471344 CCDC62Q6P9F0 684 aa17.86■□□□□ 0.45
COL1A1-203ENST00000471344 SEPT14Q6ZU15 432 aa17.86■□□□□ 0.45
COL1A1-203ENST00000471344 PIBF1Q8WXW3 757 aa17.86■□□□□ 0.45
COL1A1-203ENST00000471344 LY9Q9HBG7 655 aa17.86■□□□□ 0.45
COL1A1-203ENST00000471344 TRMT13Q9NUP7 481 aaKnown RBP17.86■□□□□ 0.45
COL1A1-203ENST00000471344 PRUNE2Q8WUY3 3088 aa17.86■□□□□ 0.45
COL1A1-203ENST00000471344 ERICH2A1L162 156 aa17.85■□□□□ 0.45
COL1A1-203ENST00000471344 RBAK-RBAKDNI3L0D1 243 aa17.85■□□□□ 0.45
COL1A1-203ENST00000471344 CPT1AP50416 773 aa17.85■□□□□ 0.45
COL1A1-203ENST00000471344 HSD17B4P51659 736 aa17.85■□□□□ 0.45
COL1A1-203ENST00000471344 TMEM240Q5SV17 173 aa17.85■□□□□ 0.45
COL1A1-203ENST00000471344 MCF2L2Q86YR7 1114 aa17.85■□□□□ 0.45
COL1A1-203ENST00000471344 IL31RAQ8NI17 732 aa17.85■□□□□ 0.45
COL1A1-203ENST00000471344 NSUN6Q8TEA1 469 aaKnown RBP17.85■□□□□ 0.45
COL1A1-203ENST00000471344 MPHOSPH6Q99547 160 aaKnown RBP17.85■□□□□ 0.45
COL1A1-203ENST00000471344 ALDH8A1Q9H2A2 487 aaPredicted RBP17.85■□□□□ 0.45
COL1A1-203ENST00000471344 TTYH1Q9H313 450 aaPredicted RBP17.85■□□□□ 0.45
COL1A1-203ENST00000471344 HIPK3Q9H422 1215 aa17.85■□□□□ 0.45
COL1A1-203ENST00000471344 RIOX1Q9H6W3 641 aa17.85■□□□□ 0.45
COL1A1-203ENST00000471344 PXMP2Q9NR77 195 aa17.85■□□□□ 0.45
COL1A1-203ENST00000471344 PCDHA1Q9Y5I3 950 aa17.85■□□□□ 0.45
COL1A1-203ENST00000471344 SLC27A2O14975 620 aa17.84■□□□□ 0.45
COL1A1-203ENST00000471344 PRC1O43663 620 aa17.84■□□□□ 0.45
COL1A1-203ENST00000471344 CCL23P55773 120 aa17.84■□□□□ 0.45
COL1A1-203ENST00000471344 TTLL4Q14679 1199 aa17.84■□□□□ 0.45
COL1A1-203ENST00000471344 ARHGEF16Q5VV41 709 aa17.84■□□□□ 0.45
COL1A1-203ENST00000471344 ZFP91Q96JP5 570 aaPredicted RBP17.84■□□□□ 0.45
COL1A1-203ENST00000471344 NOC4LQ9BVI4 516 aaKnown RBP17.84■□□□□ 0.45
COL1A1-203ENST00000471344 WNT8AQ9H1J5 351 aa17.84■□□□□ 0.45
COL1A1-203ENST00000471344 POLR3EQ9NVU0 708 aa17.84■□□□□ 0.45
COL1A1-203ENST00000471344 STXBP5LQ9Y2K9 1186 aa17.84■□□□□ 0.45
COL1A1-203ENST00000471344 A6NJR5 290 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 NKRFO15226 690 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL1A1-203ENST00000471344 CYP2C9P11712 490 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 SMAD3P84022 425 aaKnown RBP17.83■□□□□ 0.44
COL1A1-203ENST00000471344 GHRHRQ02643 423 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 ARHGAP1Q07960 439 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 PPIGQ13427 754 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL1A1-203ENST00000471344 SART3Q15020 963 aaKnown RBP17.83■□□□□ 0.44
COL1A1-203ENST00000471344 NBPF20Q3BBV1 942 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 ZNF697Q5TEC3 545 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 CREB3L3Q68CJ9 461 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 CENPQQ7L2Z9 268 aaPredicted RBP17.83■□□□□ 0.44
COL1A1-203ENST00000471344 CATIPQ7Z7H3 387 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 RAB11FIP4Q86YS3 637 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 ZNF654Q8IZM8 581 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 AFG1LQ8WV93 481 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 VWCEQ96DN2 955 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 MTG1Q9BT17 334 aaPredicted RBP17.83■□□□□ 0.44
COL1A1-203ENST00000471344 LRRC2Q9BYS8 371 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 ANO2Q9NQ90 1003 aa17.83■□□□□ 0.44
COL1A1-203ENST00000471344 GRXCR1A8MXD5 290 aa17.82■□□□□ 0.44
COL1A1-203ENST00000471344 SORBS3O60504 671 aa17.82■□□□□ 0.44
COL1A1-203ENST00000471344 RGS20O76081 388 aa17.82■□□□□ 0.44
COL1A1-203ENST00000471344 NR3C2P08235 984 aa17.82■□□□□ 0.44
COL1A1-203ENST00000471344 RXRAP19793 462 aa17.82■□□□□ 0.44
COL1A1-203ENST00000471344 CHMP4BP1P59074 171 aa17.82■□□□□ 0.44
COL1A1-203ENST00000471344 STXBP2Q15833 593 aa17.82■□□□□ 0.44
COL1A1-203ENST00000471344 FAM47CQ5HY64 1035 aa17.82■□□□□ 0.44
COL1A1-203ENST00000471344 ZNF365Q70YC5 407 aa17.82■□□□□ 0.44
COL1A1-203ENST00000471344 TMEM199Q8N511 208 aa17.82■□□□□ 0.44
COL1A1-203ENST00000471344 SCLYQ96I15 445 aa17.82■□□□□ 0.44
COL1A1-203ENST00000471344 IWS1Q96ST2 819 aa17.82■□□□□ 0.44
COL1A1-203ENST00000471344 PDCD2LQ9BRP1 358 aa17.82■□□□□ 0.44
COL1A1-203ENST00000471344 SCN5AQ14524 2016 aa17.81■□□□□ 0.44
COL1A1-203ENST00000471344 B4DLN1 442 aa17.81■□□□□ 0.44
COL1A1-203ENST00000471344 SH2B2O14492 632 aaPredicted RBP17.81■□□□□ 0.44
COL1A1-203ENST00000471344 PLEKHA8P1O95397 391 aa17.81■□□□□ 0.44
COL1A1-203ENST00000471344 MMP3P08254 477 aa17.81■□□□□ 0.44
COL1A1-203ENST00000471344 MYCLP12524 364 aaPredicted RBP17.81■□□□□ 0.44
COL1A1-203ENST00000471344 MRPL12P52815 198 aaKnown RBP17.81■□□□□ 0.44
COL1A1-203ENST00000471344 NECTIN1Q15223 517 aa17.81■□□□□ 0.44
COL1A1-203ENST00000471344 BMP2KLQ5H9B9 411 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms