RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 WWC2Q6AWC2 1192 aa8.84□□□□□ -0.99
CCDC39-202ENST00000471307 CNKSR3Q6P9H4 555 aa8.84□□□□□ -0.99
CCDC39-202ENST00000471307 NLGN1Q8N2Q7 840 aa8.84□□□□□ -0.99
CCDC39-202ENST00000471307 LGR4Q9BXB1 951 aa8.84□□□□□ -0.99
CCDC39-202ENST00000471307 FBLN5Q9UBX5 448 aa8.84□□□□□ -0.99
CCDC39-202ENST00000471307 TBX1O43435 398 aa8.83□□□□□ -1
CCDC39-202ENST00000471307 CAPNS1P04632 268 aa8.83□□□□□ -1
CCDC39-202ENST00000471307 SNRPB2P08579 225 aaKnown RBP8.83□□□□□ -1
CCDC39-202ENST00000471307 NCAM1P13591 858 aa8.83□□□□□ -1
CCDC39-202ENST00000471307 AFF3P51826 1226 aaKnown RBP8.83□□□□□ -1
CCDC39-202ENST00000471307 GTF2A2P52657 109 aa8.83□□□□□ -1
CCDC39-202ENST00000471307 MBLAC2Q68D91 279 aa8.83□□□□□ -1
CCDC39-202ENST00000471307 GFRA1P56159 465 aa8.82□□□□□ -1
CCDC39-202ENST00000471307 CELF2-AS1Q8N7Q2 184 aa8.82□□□□□ -1
CCDC39-202ENST00000471307 PLEKHO2Q8TD55 490 aa8.82□□□□□ -1
CCDC39-202ENST00000471307 SGSM3Q96HU1 749 aa8.82□□□□□ -1
CCDC39-202ENST00000471307 HCFC2Q9Y5Z7 792 aa8.82□□□□□ -1
CCDC39-202ENST00000471307 MEFVO15553 781 aaPredicted RBP8.81□□□□□ -1
CCDC39-202ENST00000471307 MYO1BO43795 1136 aa8.81□□□□□ -1
CCDC39-202ENST00000471307 NCKAP1LP55160 1127 aa8.81□□□□□ -1
CCDC39-202ENST00000471307 RAB33AQ14088 237 aa8.81□□□□□ -1
CCDC39-202ENST00000471307 INF2Q27J81 1249 aa8.81□□□□□ -1
CCDC39-202ENST00000471307 DCP2Q8IU60 420 aaKnown RBP8.81□□□□□ -1
CCDC39-202ENST00000471307 Q8N1Y9 231 aa8.81□□□□□ -1
CCDC39-202ENST00000471307 ST13P5Q8NFI4 369 aaPredicted RBP8.81□□□□□ -1
CCDC39-202ENST00000471307 PANK1Q8TE04 598 aa8.81□□□□□ -1
CCDC39-202ENST00000471307 ALG3Q92685 438 aa8.81□□□□□ -1
CCDC39-202ENST00000471307 DIO2Q92813 273 aa8.81□□□□□ -1
CCDC39-202ENST00000471307 MARCH2Q9P0N8 246 aa8.81□□□□□ -1
CCDC39-202ENST00000471307 TIMM13Q9Y5L4 95 aaPredicted RBP8.81□□□□□ -1
CCDC39-202ENST00000471307 IQCA1LA6NCM1 817 aa8.8□□□□□ -1
CCDC39-202ENST00000471307 FUCA1P04066 466 aa8.8□□□□□ -1
CCDC39-202ENST00000471307 ECI1P42126 302 aa8.8□□□□□ -1
CCDC39-202ENST00000471307 RPL11P62913 178 aaKnown RBP8.8□□□□□ -1
CCDC39-202ENST00000471307 NAALADL2Q58DX5 795 aa8.8□□□□□ -1
CCDC39-202ENST00000471307 RIOX2Q8IUF8 465 aa8.8□□□□□ -1
CCDC39-202ENST00000471307 KREMEN2Q8NCW0 462 aa8.8□□□□□ -1
CCDC39-202ENST00000471307 CPA5Q8WXQ8 436 aa8.8□□□□□ -1
CCDC39-202ENST00000471307 DPF3Q92784 378 aa8.8□□□□□ -1
CCDC39-202ENST00000471307 C8orf37Q96NL8 207 aa8.8□□□□□ -1
CCDC39-202ENST00000471307 ST7Q9NRC1 585 aa8.8□□□□□ -1
CCDC39-202ENST00000471307 STK10O94804 968 aaKnown RBP8.79□□□□□ -1
CCDC39-202ENST00000471307 NTRK1P04629 796 aa8.79□□□□□ -1
CCDC39-202ENST00000471307 ASGR2P07307 311 aa8.79□□□□□ -1
CCDC39-202ENST00000471307 KCNJ6P48051 423 aa8.79□□□□□ -1
CCDC39-202ENST00000471307 PPP2R2AP63151 447 aa8.79□□□□□ -1
CCDC39-202ENST00000471307 MAP4K2Q12851 820 aa8.79□□□□□ -1
CCDC39-202ENST00000471307 TTLL10Q6ZVT0 673 aa8.79□□□□□ -1
CCDC39-202ENST00000471307 CCDC103Q8IW40 242 aa8.79□□□□□ -1
CCDC39-202ENST00000471307 PWWP2AQ96N64 755 aa8.79□□□□□ -1
CCDC39-202ENST00000471307 TRIM55Q9BYV6 548 aa8.79□□□□□ -1
CCDC39-202ENST00000471307 AP5M1Q9H0R1 490 aa8.79□□□□□ -1
CCDC39-202ENST00000471307 FAN1Q9Y2M0 1017 aa8.79□□□□□ -1
CCDC39-202ENST00000471307 A0A1W2PQU0 124 aa8.78□□□□□ -1
CCDC39-202ENST00000471307 LTBRP36941 435 aa8.78□□□□□ -1
CCDC39-202ENST00000471307 SLC6A11P48066 632 aa8.78□□□□□ -1
CCDC39-202ENST00000471307 MROH9Q5TGP6 573 aa8.78□□□□□ -1
CCDC39-202ENST00000471307 PPIL6Q8IXY8 311 aa8.78□□□□□ -1
CCDC39-202ENST00000471307 CKAP2LQ8IYA6 745 aa8.78□□□□□ -1
CCDC39-202ENST00000471307 ZNF669Q96BR6 464 aaPredicted RBP8.78□□□□□ -1
CCDC39-202ENST00000471307 C22orf46C9J442 243 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 ATF2P15336 505 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 FOXO4P98177 505 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 HSP90AA2PQ14568 343 aaPredicted RBP8.77□□□□□ -1.01
CCDC39-202ENST00000471307 SLC35F1Q5T1Q4 408 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 NBPF6Q5VWK0 638 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 B3GNT8Q7Z7M8 397 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 LINC01356Q8N9X3 169 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 TMEM145Q8NBT3 493 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 KCTD13Q8WZ19 329 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 SEC14L1Q92503 715 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 C1orf159Q96HA4 380 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 NBPF4Q96M43 638 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 NPFFR2Q9Y5X5 522 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 X6R8D5 127 aa8.77□□□□□ -1.01
CCDC39-202ENST00000471307 PMLP29590 882 aa8.76□□□□□ -1.01
CCDC39-202ENST00000471307 SF1Q15637 639 aaKnown RBP8.76□□□□□ -1.01
CCDC39-202ENST00000471307 TEX2Q8IWB9 1127 aa8.76□□□□□ -1.01
CCDC39-202ENST00000471307 MARCH10Q8NA82 808 aaPredicted RBP8.76□□□□□ -1.01
CCDC39-202ENST00000471307 KCNC2Q96PR1 638 aa8.76□□□□□ -1.01
CCDC39-202ENST00000471307 RXFP1Q9HBX9 757 aa8.76□□□□□ -1.01
CCDC39-202ENST00000471307 PARD6AQ9NPB6 346 aa8.76□□□□□ -1.01
CCDC39-202ENST00000471307 TMEFF2Q9UIK5 374 aaPredicted RBP8.76□□□□□ -1.01
CCDC39-202ENST00000471307 H7BY64 318 aa8.75□□□□□ -1.01
CCDC39-202ENST00000471307 ARNTLO00327 626 aa8.75□□□□□ -1.01
CCDC39-202ENST00000471307 INHBBP09529 407 aa8.75□□□□□ -1.01
CCDC39-202ENST00000471307 LIMS1P48059 325 aa8.75□□□□□ -1.01
CCDC39-202ENST00000471307 PRSS53Q2L4Q9 553 aa8.75□□□□□ -1.01
CCDC39-202ENST00000471307 LRRC47Q8N1G4 583 aaKnown RBP8.75□□□□□ -1.01
CCDC39-202ENST00000471307 RCBTB1Q8NDN9 531 aa8.75□□□□□ -1.01
CCDC39-202ENST00000471307 ARMC5Q96C12 935 aa8.75□□□□□ -1.01
CCDC39-202ENST00000471307 TMEM169Q96HH4 297 aa8.75□□□□□ -1.01
CCDC39-202ENST00000471307 PCDH18Q9HCL0 1135 aa8.75□□□□□ -1.01
CCDC39-202ENST00000471307 BTG4Q9NY30 223 aa8.75□□□□□ -1.01
CCDC39-202ENST00000471307 PLA2G2DQ9UNK4 145 aa8.75□□□□□ -1.01
CCDC39-202ENST00000471307 U2SURPO15042 1029 aaKnown RBP8.74□□□□□ -1.01
CCDC39-202ENST00000471307 TRIM13O60858 407 aa8.74□□□□□ -1.01
CCDC39-202ENST00000471307 ATP2B1P20020 1258 aa8.74□□□□□ -1.01
CCDC39-202ENST00000471307 HTRA3P83110 453 aa8.74□□□□□ -1.01
CCDC39-202ENST00000471307 CACNB2Q08289 660 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms