RNA–Protein interactions for RNA: ENST00000471294.1

HDLBP-234, Transcript of high density lipoprotein binding protein, human

TSL 4

Gene HDLBP, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-234	ENST00000471294	ARHGEF6	Q15052	776 aa		13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	NIPA1	Q7RTP0	329 aa		13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	DNAJC5G	Q8N7S2	189 aa		13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	TBCK	Q8TEA7	893 aa		13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	TBC1D5	Q92609	795 aa		13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	TNPO1	Q92973	898 aa	Known RBP	13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	MBOAT7	Q96N66	472 aa		13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	EFCC1	Q9HA90	598 aa		13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	RTEL1	Q9NZ71	1219 aa		13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	CEP131	Q9UPN4	1083 aa		13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	MAFG	O15525	162 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	YEATS4	O95619	227 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	EDNRB	P24530	442 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	HOXA13	P31271	388 aa	Predicted RBP	13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	NASP	P49321	788 aa	Predicted RBP	13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	TOB1	P50616	345 aa	Predicted RBP	13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	HTRA3	P83110	453 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	ARHGAP4	P98171	946 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	SP3	Q02447	781 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	CSPP1	Q1MSJ5	1256 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	EARS2	Q5JPH6	523 aa	Known RBP	13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	MORN1	Q5T089	497 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	PCNX4	Q63HM2	1172 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	SLC30A10	Q6XR72	485 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	RASGRP4	Q8TDF6	673 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	MORC4	Q8TE76	937 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	RMDN3	Q96TC7	470 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	PDCD2L	Q9BRP1	358 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	PXMP2	Q9NR77	195 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	COL20A1	Q9P218	1284 aa		13.73	□□□□□ -0.21
HDLBP-234	ENST00000471294	MYH7B	A7E2Y1	1941 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	PLXNB2	O15031	1838 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	ADAMTS3	O15072	1205 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	TBX3	O15119	743 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	TAL1	P17542	331 aa	Predicted RBP	13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	FCGRT	P55899	365 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	LACTB	P83111	547 aa	Predicted RBP	13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	KIF22	Q14807	665 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	INF2	Q27J81	1249 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	ZNF792	Q3KQV3	632 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294		Q4G0T1	1027 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	TTC38	Q5R3I4	469 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	MAMDC4	Q6UXC1	1216 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	VSIG10L	Q86VR7	867 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	FCHSD1	Q86WN1	690 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	USP6NL	Q92738	828 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	GBP4	Q96PP9	640 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	BEGAIN	Q9BUH8	593 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	TMEM260	Q9NX78	707 aa		13.72	□□□□□ -0.21
HDLBP-234	ENST00000471294	ELP1	O95163	1332 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	LCT	P09848	1927 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	ASB14	A6NK59	587 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	GPR25	O00155	361 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	PEX10	O60683	326 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	TRPA1	O75762	1119 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	XRCC5	P13010	732 aa	Known RBP	13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	ADORA2A	P29274	412 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	CCND2	P30279	289 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	PRPH	P41219	470 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	SET	Q01105	290 aa	Predicted RBP	13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	PGM5	Q15124	567 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	ARHGEF16	Q5VV41	709 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	ANO1	Q5XXA6	986 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	TMEM87A	Q8NBN3	555 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	TAAR1	Q96RJ0	339 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	NUDT12	Q9BQG2	462 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	WBP1L	Q9NX94	342 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	RCOR1	Q9UKL0	485 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	MGAM	O43451	1857 aa		13.71	□□□□□ -0.21
HDLBP-234	ENST00000471294	TNPO2	O14787	897 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	EDIL3	O43854	480 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	PPP6R2	O75170	966 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	BAG4	O95429	457 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	NR3C2	P08235	984 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	HOXD10	P28358	340 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	RGS2	P41220	211 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	ALDH5A1	P51649	535 aa	Predicted RBP	13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	PRMT2	P55345	433 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	DNM1	Q05193	864 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	MAP2K5	Q13163	448 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	SLC39A14	Q15043	492 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	CEP55	Q53EZ4	464 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	WDR78	Q5VTH9	848 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	TRMT44	Q8IYL2	757 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	JMY	Q8N9B5	988 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	LINC00301	Q8NCQ3	95 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	KCNG4	Q8TDN1	519 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	ERO1A	Q96HE7	468 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	CDHR1	Q96JP9	859 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	USP28	Q96RU2	1077 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	R3HDML	Q9H3Y0	253 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	GJD2	Q9UKL4	321 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	UBIAD1	Q9Y5Z9	338 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	CASP8AP2	Q9UKL3	1982 aa		13.7	□□□□□ -0.22
HDLBP-234	ENST00000471294	SYNGAP1	Q96PV0	1343 aa		13.69	□□□□□ -0.22
HDLBP-234	ENST00000471294	TCHH	Q07283	1943 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms