RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 STMN2Q93045 179 aa11.55□□□□□ -0.56
RRP1B-202ENST00000470886 AGXT2Q9BYV1 514 aa11.55□□□□□ -0.56
RRP1B-202ENST00000470886 VIPAS39Q9H9C1 493 aa11.55□□□□□ -0.56
RRP1B-202ENST00000470886 LY9Q9HBG7 655 aa11.55□□□□□ -0.56
RRP1B-202ENST00000470886 ITIH6Q6UXX5 1313 aa11.55□□□□□ -0.56
RRP1B-202ENST00000470886 PGRMC1O00264 195 aaKnown RBP11.55□□□□□ -0.56
RRP1B-202ENST00000470886 HEXIM1O94992 359 aaKnown RBP11.55□□□□□ -0.56
RRP1B-202ENST00000470886 CLNS1AP54105 237 aaKnown RBP11.55□□□□□ -0.56
RRP1B-202ENST00000470886 EXOC3L4Q17RC7 722 aa11.55□□□□□ -0.56
RRP1B-202ENST00000470886 RBM26Q5T8P6 1007 aaKnown RBP11.55□□□□□ -0.56
RRP1B-202ENST00000470886 SPATA24Q86W54 205 aa11.55□□□□□ -0.56
RRP1B-202ENST00000470886 GPKOWQ92917 476 aaPredicted RBP eCLIP11.55□□□□□ -0.56
RRP1B-202ENST00000470886 AIFM3Q96NN9 605 aa11.55□□□□□ -0.56
RRP1B-202ENST00000470886 ENC1O14682 589 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 E4F1Q66K89 784 aaPredicted RBP11.54□□□□□ -0.56
RRP1B-202ENST00000470886 VSIG1Q86XK7 387 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 EDEM3Q9BZQ6 932 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 TRIM31Q9BZY9 425 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 PCDHA13Q9Y5I0 950 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 MED1Q15648 1581 aaPredicted RBP11.54□□□□□ -0.56
RRP1B-202ENST00000470886 CCDC188H7C350 402 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 BUB1O43683 1085 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 RASSF7Q02833 373 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 TBC1D10CQ8IV04 446 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 PROM2Q8N271 834 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 RNF10Q8N5U6 811 aaKnown RBP11.54□□□□□ -0.56
RRP1B-202ENST00000470886 EPSTI1Q96J88 318 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 KDM6AO15550 1401 aaPredicted RBP11.54□□□□□ -0.56
RRP1B-202ENST00000470886 USP54Q70EL1 1684 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 CIB2O75838 187 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 SHC4Q6S5L8 630 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 SLC17A8Q8NDX2 589 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 KAZALD1Q96I82 304 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 CCDC17Q96LX7 622 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 NDST4Q9H3R1 872 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 PNMA2Q9UL42 364 aa11.54□□□□□ -0.56
RRP1B-202ENST00000470886 DIS3Q9Y2L1 958 aaKnown RBP11.54□□□□□ -0.56
RRP1B-202ENST00000470886 LIG3P49916 1009 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 SMYD4Q8IYR2 804 aaPredicted RBP11.53□□□□□ -0.56
RRP1B-202ENST00000470886 CCDC110Q8TBZ0 833 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 KRT5P13647 590 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 KIF11P52732 1056 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 STOX1Q6ZVD7 989 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 GPHNQ9NQX3 736 aaPredicted RBP11.53□□□□□ -0.56
RRP1B-202ENST00000470886 PSD3Q9NYI0 1048 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 TBC1D7Q9P0N9 293 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 KLHL14Q9P2G3 628 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 PNPLA7Q6ZV29 1317 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 A0A1B0GTH6 734 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 PVALEFA0A1B0GWK0 134 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 CSF1RP07333 972 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 EHHADHQ08426 723 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 RASGRF1Q13972 1273 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 LGSNQ5TDP6 509 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 LRCH2Q5VUJ6 765 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 UBN2Q6ZU65 1347 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 KDM3BQ7LBC6 1761 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 ENGASEQ8NFI3 743 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 PASKQ96RG2 1323 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 KRT12Q99456 494 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 SETD1BQ9UPS6 1966 aaKnown RBP11.53□□□□□ -0.56
RRP1B-202ENST00000470886 JAG2Q9Y219 1238 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 ZNF804BA4D1E1 1349 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 TMEM232C9JQI7 657 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 ATP1A2P50993 1020 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 HHATQ5VTY9 493 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 PPP1R2P3Q6NXS1 205 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 CYB5R4Q7L1T6 521 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 PNMA8AQ86V59 439 aaPredicted RBP11.53□□□□□ -0.56
RRP1B-202ENST00000470886 FAM81BQ96LP2 452 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 SPZ1Q9BXG8 430 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 L2HGDHQ9H9P8 463 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 EPB41L5Q9HCM4 733 aa11.53□□□□□ -0.56
RRP1B-202ENST00000470886 AFPP02771 609 aaKnown RBP11.52□□□□□ -0.56
RRP1B-202ENST00000470886 EIF4A3P38919 411 aaKnown RBP11.52□□□□□ -0.56
RRP1B-202ENST00000470886 CDC37Q16543 378 aaPredicted RBP11.52□□□□□ -0.56
RRP1B-202ENST00000470886 PFKFB3Q16875 520 aaPredicted RBP11.52□□□□□ -0.56
RRP1B-202ENST00000470886 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.52□□□□□ -0.56
RRP1B-202ENST00000470886 LIMA1Q9UHB6 759 aaKnown RBP11.52□□□□□ -0.56
RRP1B-202ENST00000470886 KIF13AQ9H1H9 1805 aa11.52□□□□□ -0.56
RRP1B-202ENST00000470886 EIF3CLB5ME19 914 aaKnown RBP11.52□□□□□ -0.57
RRP1B-202ENST00000470886 H0YCG3 227 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 MYO1CO00159 1063 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 GJC1P36383 396 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 KCNB1Q14721 858 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 SNCBQ16143 134 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 CCDC14Q49A88 953 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 EIF3CQ99613 913 aaKnown RBP11.52□□□□□ -0.57
RRP1B-202ENST00000470886 TCHPQ9BT92 498 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 CCNL1Q9UK58 526 aaPredicted RBP11.52□□□□□ -0.57
RRP1B-202ENST00000470886 STX2P32856 288 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 PI16Q6UXB8 463 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 CCDC197Q8NCU1 140 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 CEP63Q96MT8 703 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 VCXQ9H320 206 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 THRAP3Q9Y2W1 955 aaKnown RBP11.52□□□□□ -0.57
RRP1B-202ENST00000470886 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.52□□□□□ -0.57
RRP1B-202ENST00000470886 KAT6BQ8WYB5 2073 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 CYP2C19P33261 490 aa11.52□□□□□ -0.57
RRP1B-202ENST00000470886 USP14P54578 494 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms