RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 RIPK3Q9Y572 518 aa10.54□□□□□ -0.72
XRN1-208ENST00000470537 COL11A1P12107 1806 aaPredicted RBP10.54□□□□□ -0.72
XRN1-208ENST00000470537 MYADML2A6NDP7 307 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 ERC2O15083 957 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 NDUFB10O96000 172 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 BMP1P13497 986 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 ATP2A2P16615 1042 aaKnown RBP10.53□□□□□ -0.72
XRN1-208ENST00000470537 POU3F3P20264 500 aaPredicted RBP10.53□□□□□ -0.72
XRN1-208ENST00000470537 ADGRE1Q14246 886 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 LRRFIP1Q32MZ4 808 aaKnown RBP10.53□□□□□ -0.72
XRN1-208ENST00000470537 TKFCQ3LXA3 575 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 SBK1Q52WX2 424 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 BRDTQ58F21 947 aaPredicted RBP10.53□□□□□ -0.72
XRN1-208ENST00000470537 TMEM67Q5HYA8 995 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 SLC43A3Q8NBI5 491 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 MKL1Q969V6 931 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 HAUS7Q99871 368 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 BOLA2Q9H3K6 86 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 ACAD9Q9H845 621 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 CLIP2Q9UDT6 1046 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 COG6Q9Y2V7 657 aa10.53□□□□□ -0.72
XRN1-208ENST00000470537 PARP14Q460N5 1801 aa10.52□□□□□ -0.73
XRN1-208ENST00000470537 CYP2D7A0A087X1C5 515 aa10.52□□□□□ -0.73
XRN1-208ENST00000470537 ZBBXA8MT70 800 aa10.52□□□□□ -0.73
XRN1-208ENST00000470537 TTLL1O95922 423 aa10.52□□□□□ -0.73
XRN1-208ENST00000470537 SLC3A2P08195 630 aaKnown RBP10.52□□□□□ -0.73
XRN1-208ENST00000470537 GNAT2P19087 354 aa10.52□□□□□ -0.73
XRN1-208ENST00000470537 CXCL17Q6UXB2 119 aa10.52□□□□□ -0.73
XRN1-208ENST00000470537 TLK2Q86UE8 772 aa10.52□□□□□ -0.73
XRN1-208ENST00000470537 FAM160B2Q86V87 743 aa10.52□□□□□ -0.73
XRN1-208ENST00000470537 MICALL1Q8N3F8 863 aa10.52□□□□□ -0.73
XRN1-208ENST00000470537 GMCL1P1Q8NEA9 526 aa10.52□□□□□ -0.73
XRN1-208ENST00000470537 PHOSPHO2Q8TCD6 241 aa10.52□□□□□ -0.73
XRN1-208ENST00000470537 NUP88Q99567 741 aaPredicted RBP10.52□□□□□ -0.73
XRN1-208ENST00000470537 RAVER2Q9HCJ3 691 aaKnown RBP10.52□□□□□ -0.73
XRN1-208ENST00000470537 PKD2L1Q9P0L9 805 aa10.52□□□□□ -0.73
XRN1-208ENST00000470537 ZBED9Q6R2W3 1325 aa10.52□□□□□ -0.73
XRN1-208ENST00000470537 MINDY4BA8MYZ0 360 aa10.51□□□□□ -0.73
XRN1-208ENST00000470537 DYNC1LI2O43237 492 aaPredicted RBP10.51□□□□□ -0.73
XRN1-208ENST00000470537 BMP3P12645 472 aa10.51□□□□□ -0.73
XRN1-208ENST00000470537 RFC2P35250 354 aa10.51□□□□□ -0.73
XRN1-208ENST00000470537 STAT2P52630 851 aa10.51□□□□□ -0.73
XRN1-208ENST00000470537 CCL23P55773 120 aa10.51□□□□□ -0.73
XRN1-208ENST00000470537 PDE4BQ07343 736 aa10.51□□□□□ -0.73
XRN1-208ENST00000470537 IKQ13123 557 aaPredicted RBP10.51□□□□□ -0.73
XRN1-208ENST00000470537 FAM133AQ8N9E0 248 aa10.51□□□□□ -0.73
XRN1-208ENST00000470537 SLC9A7Q96T83 725 aa10.51□□□□□ -0.73
XRN1-208ENST00000470537 MPHOSPH6Q99547 160 aaKnown RBP10.51□□□□□ -0.73
XRN1-208ENST00000470537 NOC4LQ9BVI4 516 aaKnown RBP10.51□□□□□ -0.73
XRN1-208ENST00000470537 BCL11AQ9H165 835 aa10.51□□□□□ -0.73
XRN1-208ENST00000470537 AAASQ9NRG9 546 aa10.51□□□□□ -0.73
XRN1-208ENST00000470537 POLR3EQ9NVU0 708 aa10.51□□□□□ -0.73
XRN1-208ENST00000470537 DAXXQ9UER7 740 aaPredicted RBP10.51□□□□□ -0.73
XRN1-208ENST00000470537 ISY1Q9ULR0 285 aaKnown RBP10.51□□□□□ -0.73
XRN1-208ENST00000470537 GNEQ9Y223 722 aaKnown RBP10.51□□□□□ -0.73
XRN1-208ENST00000470537 FCF1Q9Y324 198 aaKnown RBP10.51□□□□□ -0.73
XRN1-208ENST00000470537 CHD7Q9P2D1 2997 aa10.51□□□□□ -0.73
XRN1-208ENST00000470537 XIRP2A4UGR9 3374 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 LOC102724159A0A0B4J2E5 919 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 DDX11L8A8MPP1 907 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 KPNA6O60684 536 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 APPP05067 770 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 ZFYP08048 801 aaPredicted RBP10.5□□□□□ -0.73
XRN1-208ENST00000470537 RASA1P20936 1047 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 CPT1AP50416 773 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 BEX3Q00994 111 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 FUT2Q10981 343 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 PWP2Q15269 919 aaKnown RBP10.5□□□□□ -0.73
XRN1-208ENST00000470537 TMEM31Q5JXX7 168 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 RETREG2Q8NC44 543 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 HLA-CQ95604 372 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 STRBPQ96SI9 672 aaKnown RBP10.5□□□□□ -0.73
XRN1-208ENST00000470537 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.5□□□□□ -0.73
XRN1-208ENST00000470537 NACAP1Q9BZK3 213 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 TRPV6Q9H1D0 765 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 VTA1Q9NP79 307 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 HOMER2Q9NSB8 354 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 MTMR4Q9NYA4 1195 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 ADD3Q9UEY8 706 aaKnown RBP10.5□□□□□ -0.73
XRN1-208ENST00000470537 PNMA2Q9UL42 364 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 YBX2Q9Y2T7 364 aaKnown RBP10.5□□□□□ -0.73
XRN1-208ENST00000470537 RAD50Q92878 1312 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 BAZ2AQ9UIF9 1905 aaKnown RBP10.5□□□□□ -0.73
XRN1-208ENST00000470537 TRANK1O15050 2925 aa10.5□□□□□ -0.73
XRN1-208ENST00000470537 B4DLN1 442 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 CTAGE5O15320 804 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 ADCY6O43306 1168 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 B4GALT4O60513 344 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 PLA2G6O60733 806 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 TSPY3P0CV98 308 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 TSPY8P0CW00 308 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 FECHP22830 423 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 SLC1A4P43007 532 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 TDO2P48775 406 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 RPIAP49247 311 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 MRPL12P52815 198 aaKnown RBP10.49□□□□□ -0.73
XRN1-208ENST00000470537 RABGGTBP53611 331 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 CNTN2Q02246 1040 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 SLFN13Q68D06 897 aa10.49□□□□□ -0.73
XRN1-208ENST00000470537 KIAA1211Q6ZU35 1233 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms