RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 RPS6KB1P23443 525 aa16.36■□□□□ 0.21
TOP3B-215ENST00000470338 GNASQ5JWF2 1037 aa16.36■□□□□ 0.21
TOP3B-215ENST00000470338 Q6ZUG5 572 aa16.36■□□□□ 0.21
TOP3B-215ENST00000470338 NOL8Q76FK4 1167 aaKnown RBP16.36■□□□□ 0.21
TOP3B-215ENST00000470338 PCSK9Q8NBP7 692 aaKnown RBP16.36■□□□□ 0.21
TOP3B-215ENST00000470338 WDR11Q9BZH6 1224 aa16.36■□□□□ 0.21
TOP3B-215ENST00000470338 PXMP2Q9NR77 195 aa16.36■□□□□ 0.21
TOP3B-215ENST00000470338 RBM28Q9NW13 759 aaKnown RBP16.36■□□□□ 0.21
TOP3B-215ENST00000470338 SEC63Q9UGP8 760 aaKnown RBP16.36■□□□□ 0.21
TOP3B-215ENST00000470338 MYH7BA7E2Y1 1941 aa16.36■□□□□ 0.21
TOP3B-215ENST00000470338 KLF18A0A0U1RQI7 1052 aa16.35■□□□□ 0.21
TOP3B-215ENST00000470338 GCOM1H8Y6P7 765 aaPredicted RBP16.35■□□□□ 0.21
TOP3B-215ENST00000470338 DYNC1LI2O43237 492 aaPredicted RBP16.35■□□□□ 0.21
TOP3B-215ENST00000470338 POLR2MP0CAP2 368 aa16.35■□□□□ 0.21
TOP3B-215ENST00000470338 CASTP20810 708 aaKnown RBP16.35■□□□□ 0.21
TOP3B-215ENST00000470338 HOXA13P31271 388 aaPredicted RBP16.35■□□□□ 0.21
TOP3B-215ENST00000470338 RTP1P59025 263 aa16.35■□□□□ 0.21
TOP3B-215ENST00000470338 ARHGEF16Q5VV41 709 aa16.35■□□□□ 0.21
TOP3B-215ENST00000470338 TLK2Q86UE8 772 aa16.35■□□□□ 0.21
TOP3B-215ENST00000470338 AP5M1Q9H0R1 490 aa16.35■□□□□ 0.21
TOP3B-215ENST00000470338 ZSWIM6Q9HCJ5 1215 aa16.35■□□□□ 0.21
TOP3B-215ENST00000470338 FAM217BQ9NTX9 383 aaPredicted RBP16.35■□□□□ 0.21
TOP3B-215ENST00000470338 ASGR1P07306 291 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 NR3C2P08235 984 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 PTGS1P23219 599 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 FGD1P98174 961 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 FUT2Q10981 343 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 PPP2R5BQ15173 497 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 STXBP2Q15833 593 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 RTN1Q16799 776 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 RUFY3Q7L099 469 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 CCDC82Q8N4S0 544 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 SCFD2Q8WU76 684 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 BRF1Q92994 677 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 TM6SF1Q9BZW5 370 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 PRO3102Q9H379 93 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 COLQQ9Y215 455 aaPredicted RBP16.34■□□□□ 0.21
TOP3B-215ENST00000470338 ELP1O95163 1332 aa16.34■□□□□ 0.21
TOP3B-215ENST00000470338 RANBP2P49792 3224 aaKnown RBP16.33■□□□□ 0.21
TOP3B-215ENST00000470338 NKRFO15226 690 aaKnown RBP eCLIP16.33■□□□□ 0.2
TOP3B-215ENST00000470338 EIF3JO75822 258 aaKnown RBP16.33■□□□□ 0.2
TOP3B-215ENST00000470338 EIF2AK2P19525 551 aaKnown RBP16.33■□□□□ 0.2
TOP3B-215ENST00000470338 EVCP57679 992 aa16.33■□□□□ 0.2
TOP3B-215ENST00000470338 BEX3Q00994 111 aa16.33■□□□□ 0.2
TOP3B-215ENST00000470338 APOBRQ0VD83 1088 aa16.33■□□□□ 0.2
TOP3B-215ENST00000470338 FSCN1Q16658 493 aaKnown RBP16.33■□□□□ 0.2
TOP3B-215ENST00000470338 PDCD2LQ9BRP1 358 aa16.33■□□□□ 0.2
TOP3B-215ENST00000470338 ZMYND8Q9ULU4 1186 aaPredicted RBP16.33■□□□□ 0.2
TOP3B-215ENST00000470338 ATP11BQ9Y2G3 1177 aa16.33■□□□□ 0.2
TOP3B-215ENST00000470338 CNTNAP5Q8WYK1 1306 aa16.33■□□□□ 0.2
TOP3B-215ENST00000470338 hCG_1642624A0A1W2PR95 340 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 GOLGA8AA7E2F4 631 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 GOLGA8BA8MQT2 603 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 PIK3CDO00329 1044 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 MEIS2O14770 477 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 TXNP10599 105 aaKnown RBP16.32■□□□□ 0.2
TOP3B-215ENST00000470338 SYN1P17600 705 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 CDC27P30260 824 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 NID2Q14112 1375 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 TTLL4Q14679 1199 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 PGM5Q15124 567 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 TRIM60Q495X7 471 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 CCDC62Q6P9F0 684 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 CHRDL2Q6WN34 429 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 VSIG10LQ86VR7 867 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 GLT1D1Q96MS3 346 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 STARD7Q9NQZ5 370 aa16.32■□□□□ 0.2
TOP3B-215ENST00000470338 LTBP2Q14767 1821 aa16.31■□□□□ 0.2
TOP3B-215ENST00000470338 FRMPD4Q14CM0 1322 aa16.31■□□□□ 0.2
TOP3B-215ENST00000470338 ZEB2O60315 1214 aa16.31■□□□□ 0.2
TOP3B-215ENST00000470338 ARIH2O95376 493 aa16.31■□□□□ 0.2
TOP3B-215ENST00000470338 ADD1P35611 737 aaKnown RBP16.31■□□□□ 0.2
TOP3B-215ENST00000470338 CDK7P50613 346 aa16.31■□□□□ 0.2
TOP3B-215ENST00000470338 TLE2Q04725 743 aa16.31■□□□□ 0.2
TOP3B-215ENST00000470338 SEPT14Q6ZU15 432 aa16.31■□□□□ 0.2
TOP3B-215ENST00000470338 ANKRD33Q7Z3H0 272 aa16.31■□□□□ 0.2
TOP3B-215ENST00000470338 FCHSD1Q86WN1 690 aa16.31■□□□□ 0.2
TOP3B-215ENST00000470338 TOX2Q96NM4 488 aa16.31■□□□□ 0.2
TOP3B-215ENST00000470338 GDF15Q99988 308 aa16.31■□□□□ 0.2
TOP3B-215ENST00000470338 CYP46A1Q9Y6A2 500 aa16.31■□□□□ 0.2
TOP3B-215ENST00000470338 TRIOBPQ9H2D6 2365 aa16.3■□□□□ 0.2
TOP3B-215ENST00000470338 CCDC196A0A1B0GTZ2 297 aa16.3■□□□□ 0.2
TOP3B-215ENST00000470338 CABYRO75952 493 aa16.3■□□□□ 0.2
TOP3B-215ENST00000470338 RGS20O76081 388 aa16.3■□□□□ 0.2
TOP3B-215ENST00000470338 MYCLP12524 364 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-215ENST00000470338 BMP8BP34820 402 aa16.3■□□□□ 0.2
TOP3B-215ENST00000470338 METAP2P50579 478 aaKnown RBP eCLIP16.3■□□□□ 0.2
TOP3B-215ENST00000470338 TOB2Q14106 344 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-215ENST00000470338 HABP4Q5JVS0 413 aaKnown RBP16.3■□□□□ 0.2
TOP3B-215ENST00000470338 USP17L6PQ6QN14 398 aa16.3■□□□□ 0.2
TOP3B-215ENST00000470338 OR6J1Q8NGC5 347 aa16.3■□□□□ 0.2
TOP3B-215ENST00000470338 IL31RAQ8NI17 732 aa16.3■□□□□ 0.2
TOP3B-215ENST00000470338 COPS5Q92905 334 aa16.3■□□□□ 0.2
TOP3B-215ENST00000470338 PSTPIP2Q9H939 334 aa16.3■□□□□ 0.2
TOP3B-215ENST00000470338 RBM27Q9P2N5 1060 aaKnown RBP16.3■□□□□ 0.2
TOP3B-215ENST00000470338 NAP1L2Q9ULW6 460 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-215ENST00000470338 V9GY48 417 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-215ENST00000470338 SCN10AQ9Y5Y9 1956 aa16.29■□□□□ 0.2
TOP3B-215ENST00000470338 A0A0U1RQG5 324 aaPredicted RBP16.29■□□□□ 0.2
TOP3B-215ENST00000470338 A6NJR5 290 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms