RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ARID3AQ99856 593 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 CCSER1Q9C0I3 900 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 LRRC27Q9C0I9 530 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 L2HGDHQ9H9P8 463 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 CD209Q9NNX6 404 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 DISC1Q9NRI5 854 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 OGFRQ9NZT2 677 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 ZNF215Q9UL58 517 aaPredicted RBP8.99□□□□□ -0.97
SMC4-212ENST00000470240 JAG2Q9Y219 1238 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 PPP2R2CQ9Y2T4 447 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 IRS2Q9Y4H2 1338 aa8.99□□□□□ -0.97
SMC4-212ENST00000470240 MYH1P12882 1939 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 ESYT2A0FGR8 921 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 PALM3A6NDB9 673 aaPredicted RBP8.98□□□□□ -0.97
SMC4-212ENST00000470240 TMEM232C9JQI7 657 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 KLRF2D3W0D1 207 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 ST8SIA5O15466 376 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 KIF5CO60282 957 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 URI1O94763 535 aaPredicted RBP8.98□□□□□ -0.97
SMC4-212ENST00000470240 OR52Z1P0C646 297 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 SMPD1P17405 629 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 CDK8P49336 464 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 GPSM2P81274 684 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 CUL4BQ13620 913 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 KCNB1Q14721 858 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 NPY5RQ15761 445 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 CRY2Q49AN0 593 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 ASPRV1Q53RT3 343 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 HSP90AA4PQ58FG1 418 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 EARS2Q5JPH6 523 aaKnown RBP8.98□□□□□ -0.97
SMC4-212ENST00000470240 MFSD14BQ5SR56 506 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 CDKAL1Q5VV42 579 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 RCSD1Q6JBY9 416 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 PRR5LQ6MZQ0 368 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 PDXDC2PQ6P474 469 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 USP49Q70CQ1 688 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 NEDD1Q8NHV4 660 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 NELFBQ8WX92 580 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 GPKOWQ92917 476 aaPredicted RBP eCLIP8.98□□□□□ -0.974e-13■□□□□ 10.3
SMC4-212ENST00000470240 IQCDQ96DY2 449 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 CALML4Q96GE6 196 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 GJD4Q96KN9 370 aaPredicted RBP8.98□□□□□ -0.97
SMC4-212ENST00000470240 CRAMP1Q96RY5 1269 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 NAP1L4Q99733 375 aaKnown RBP8.98□□□□□ -0.97
SMC4-212ENST00000470240 TMEM47Q9BQJ4 181 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 RTFDC1Q9BY42 306 aaPredicted RBP8.98□□□□□ -0.97
SMC4-212ENST00000470240 SAMSN1Q9NSI8 373 aaKnown RBP8.98□□□□□ -0.97
SMC4-212ENST00000470240 PODXL2Q9NZ53 605 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 SWAP70Q9UH65 585 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 MKRN1Q9UHC7 482 aaKnown RBP8.98□□□□□ -0.97
SMC4-212ENST00000470240 SAP30BPQ9UHR5 308 aaKnown RBP8.98□□□□□ -0.97
SMC4-212ENST00000470240 MAD2L2Q9UI95 211 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 TRPC5Q9UL62 973 aaPredicted RBP8.98□□□□□ -0.97
SMC4-212ENST00000470240 TTF2Q9UNY4 1162 aaKnown RBP8.98□□□□□ -0.97
SMC4-212ENST00000470240 MTMR7Q9Y216 660 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 WASF2Q9Y6W5 498 aa8.98□□□□□ -0.97
SMC4-212ENST00000470240 USP17L3A6NCW0 530 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 USP17L4A6NCW7 530 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 WTIPA6NIX2 430 aaPredicted RBP8.97□□□□□ -0.97
SMC4-212ENST00000470240 KCNJ18B7U540 433 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 STXBP3O00186 592 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 AXIN1O15169 862 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 MFAP3LO75121 409 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 IPO7O95373 1038 aaKnown RBP8.97□□□□□ -0.97
SMC4-212ENST00000470240 FGFR1OPO95684 399 aaKnown RBP8.97□□□□□ -0.97
SMC4-212ENST00000470240 SERPINB2P05120 415 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 HLA-DOAP06340 250 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 RASA1P20936 1047 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 EEF1GP26641 437 aaKnown RBP8.97□□□□□ -0.97
SMC4-212ENST00000470240 STX17P56962 302 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 GNG11P61952 73 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 KCNJ12Q14500 433 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 SLC4A8Q2Y0W8 1093 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 USP17L1Q7RTZ2 530 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 NEK8Q86SG6 692 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 TXNRD3Q86VQ6 643 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 TMTC1Q8IUR5 882 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 REXO1Q8N1G1 1221 aaKnown RBP8.97□□□□□ -0.97
SMC4-212ENST00000470240 DYNLL2Q96FJ2 89 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 DHTKD1Q96HY7 919 aaPredicted RBP8.97□□□□□ -0.97
SMC4-212ENST00000470240 CDK5RAP3Q96JB5 506 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 NUP88Q99567 741 aaPredicted RBP8.97□□□□□ -0.97
SMC4-212ENST00000470240 COA1Q9GZY4 146 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 ZMYND12Q9H0C1 365 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 GLT8D2Q9H1C3 349 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 IL17RBQ9NRM6 502 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 EXOC1Q9NV70 894 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 ADD3Q9UEY8 706 aaKnown RBP8.97□□□□□ -0.97
SMC4-212ENST00000470240 LIMA1Q9UHB6 759 aaKnown RBP8.97□□□□□ -0.97
SMC4-212ENST00000470240 PCDHA6Q9UN73 950 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 PCDHA8Q9Y5H6 950 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 FLT1P17948 1338 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 MYH8P13535 1937 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 PLIN4Q96Q06 1357 aa8.97□□□□□ -0.97
SMC4-212ENST00000470240 DDX60LQ5H9U9 1706 aaKnown RBP8.97□□□□□ -0.97
SMC4-212ENST00000470240 UBR3Q6ZT12 1888 aa8.96□□□□□ -0.97
SMC4-212ENST00000470240 A0A087X0B3 334 aa8.96□□□□□ -0.98
SMC4-212ENST00000470240 SMCO2A6NFE2 343 aa8.96□□□□□ -0.98
SMC4-212ENST00000470240 EFCAB8A8MWE9 144 aa8.96□□□□□ -0.98
SMC4-212ENST00000470240 SMIM22K7EJ46 135 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms