RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 PTGISQ16647 500 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 TIGD5Q53EQ6 642 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 GIMAP6Q6P9H5 292 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 FTSJ3Q8IY81 847 aaKnown RBP10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 FBXO22Q8NEZ5 403 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 RHPN1Q8TCX5 695 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 NEK9Q8TD19 979 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 MORC4Q8TE76 937 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 MRPL38Q96DV4 380 aaKnown RBP10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 SAMD11Q96NU1 681 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 POP1Q99575 1024 aaKnown RBP10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 IL1RAPL2Q9NP60 686 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 MTMR4Q9NYA4 1195 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 INSL6Q9Y581 213 aa10.56□□□□□ -0.72
SYNGAP1-205ENST00000470232 LINC01553A4QN01 128 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 B4DLN1 442 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 PLA2G6O60733 806 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 SELPP16109 830 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 SLC1A4P43007 532 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 MRPL12P52815 198 aaKnown RBP10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 NSMFQ6X4W1 530 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 EP400NLQ6ZTU2 488 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 HFE2Q6ZVN8 426 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 ADHFE1Q8IWW8 467 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 STK11IPQ8N1F8 1099 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 LRRC47Q8N1G4 583 aaKnown RBP10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 PABPC5Q96DU9 382 aaKnown RBP10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 KIF1BPQ96EK5 621 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 IRF2BPLQ9H1B7 796 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 TNNQ9UQP3 1299 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 USP34Q70CQ2 3546 aa10.55□□□□□ -0.72
SYNGAP1-205ENST00000470232 MYH4Q9Y623 1939 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 IGKV6D-41A0A0C4DH26 115 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 RBM47A0AV96 593 aaKnown RBP10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 A6NJR5 290 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 H3BQ06 376 aaPredicted RBP10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 TSPY3P0CV98 308 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 TSPY8P0CW00 308 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 PTGS1P23219 599 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 CHMP4BP1P59074 171 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 ZP2Q05996 745 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 PPP2R5BQ15173 497 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 TMEM63BQ5T3F8 832 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 SPRED2Q7Z698 418 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 ITPRIPQ8IWB1 547 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 CEP95Q96GE4 821 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 GMCL1Q96IK5 515 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 BACH2Q9BYV9 841 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 BOLA2Q9H3K6 86 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 FARP1Q9Y4F1 1045 aaPredicted RBP10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 TET1Q8NFU7 2136 aa10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 TRIP12Q14669 1992 aaPredicted RBP10.54□□□□□ -0.72
SYNGAP1-205ENST00000470232 COL4A4P53420 1690 aaPredicted RBP10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 CXCL10P02778 98 aa10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 SLC3A2P08195 630 aaKnown RBP10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 ATP5JP18859 108 aa10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 ALDH5A1P51649 535 aaPredicted RBP10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 DEFB103AP81534 67 aa10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 PDE4BQ07343 736 aa10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 PDE4DQ08499 809 aa10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 C20orf194Q5TEA3 1177 aa10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 RCSD1Q6JBY9 416 aa10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 CEP85Q6P2H3 762 aa10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 LRRC8DQ7L1W4 858 aa10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 CENPQQ7L2Z9 268 aaPredicted RBP10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 BMP8AQ7Z5Y6 402 aa10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 BANK1Q8NDB2 785 aa10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 SCFD2Q8WU76 684 aa10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 CCPG1Q9ULG6 757 aa10.53□□□□□ -0.72
SYNGAP1-205ENST00000470232 GREB1LQ9C091 1923 aaPredicted RBP10.52□□□□□ -0.72
SYNGAP1-205ENST00000470232 TRIOO75962 3097 aa10.52□□□□□ -0.72
SYNGAP1-205ENST00000470232 SCN10AQ9Y5Y9 1956 aa10.52□□□□□ -0.72
SYNGAP1-205ENST00000470232 SIP14410 1827 aa10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 AMHP03971 560 aa10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 GNAT2P19087 354 aa10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 MCCP23508 829 aa10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 BAATQ14032 418 aaPredicted RBP10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 SLFNL1Q499Z3 407 aa10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 HERC4Q5GLZ8 1057 aaPredicted RBP10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 MUM1L1Q5H9M0 696 aa10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 FAM117BQ6P1L5 589 aa10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 TMCO2Q7Z6W1 182 aaPredicted RBP10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 SUGP1Q8IWZ8 645 aaKnown RBP10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 NEDD1Q8NHV4 660 aa10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 EDAQ92838 391 aa10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 STRBPQ96SI9 672 aaKnown RBP10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 HAUS7Q99871 368 aa10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 PUS7LQ9H0K6 701 aaKnown RBP10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 BCL11AQ9H165 835 aa10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 NSUN3Q9H649 340 aaKnown RBP10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 PNMA2Q9UL42 364 aa10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 DDX49Q9Y6V7 483 aaKnown RBP10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 TANC1Q9C0D5 1861 aa10.52□□□□□ -0.73
SYNGAP1-205ENST00000470232 PTPDC1A2A3K4 754 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 GSG1L2A8MUP6 293 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 H3BNC9 293 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 RAB11FIP3O75154 756 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 HMMRO75330 724 aa10.51□□□□□ -0.73
SYNGAP1-205ENST00000470232 PRDM1O75626 825 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms