RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 SNCAIPQ9Y6H5 919 aa20.47■□□□□ 0.87
SMC4-211ENST00000469858 COL11A1P12107 1806 aaPredicted RBP20.47■□□□□ 0.87
SMC4-211ENST00000469858 MOXD1Q6UVY6 613 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 TEX2Q8IWB9 1127 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 GJA10Q969M2 543 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 C12orf42Q96LP6 360 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 RAB34Q9BZG1 259 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 RAVER2Q9HCJ3 691 aaKnown RBP20.46■□□□□ 0.87
SMC4-211ENST00000469858 LRWD1Q9UFC0 647 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 CTDP1Q9Y5B0 961 aaPredicted RBP20.46■□□□□ 0.87
SMC4-211ENST00000469858 RLFQ13129 1914 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 CYP3A7-CYP3A51PA0A087WV96 503 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 POTEMA6NI47 508 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 CYP3A7P24462 503 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 DPYDQ12882 1025 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 EAPPQ56P03 285 aaPredicted RBP20.46■□□□□ 0.87
SMC4-211ENST00000469858 NAALADL2Q58DX5 795 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 SPATA20Q8TB22 786 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 TRIM44Q96DX7 344 aaPredicted RBP20.46■□□□□ 0.87
SMC4-211ENST00000469858 UIMC1Q96RL1 719 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 BPIFA3Q9BQP9 254 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 AFG3L2Q9Y4W6 797 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 PTPRFP10586 1907 aa20.46■□□□□ 0.87
SMC4-211ENST00000469858 RBBP6Q7Z6E9 1792 aaKnown RBP20.45■□□□□ 0.86
SMC4-211ENST00000469858 PLCG1P19174 1290 aa20.45■□□□□ 0.86
SMC4-211ENST00000469858 BMP6P22004 513 aa20.45■□□□□ 0.86
SMC4-211ENST00000469858 PRR16Q569H4 304 aa20.45■□□□□ 0.86
SMC4-211ENST00000469858 ZC3H15Q8WU90 426 aaKnown RBP20.45■□□□□ 0.86
SMC4-211ENST00000469858 MBOAT7Q96N66 472 aa20.45■□□□□ 0.86
SMC4-211ENST00000469858 MTRQ99707 1265 aa20.45■□□□□ 0.86
SMC4-211ENST00000469858 BLZF1Q9H2G9 400 aa20.45■□□□□ 0.86
SMC4-211ENST00000469858 TMOD4Q9NZQ9 345 aa20.45■□□□□ 0.86
SMC4-211ENST00000469858 CSADQ9Y600 493 aa20.45■□□□□ 0.86
SMC4-211ENST00000469858 ALAS1P13196 640 aa20.45■□□□□ 0.86
SMC4-211ENST00000469858 TRIML1Q8N9V2 468 aa20.45■□□□□ 0.86
SMC4-211ENST00000469858 ATG4CQ96DT6 458 aa20.45■□□□□ 0.86
SMC4-211ENST00000469858 CDCA5Q96FF9 252 aa20.45■□□□□ 0.86
SMC4-211ENST00000469858 MMTAG2Q9BU76 263 aaKnown RBP20.45■□□□□ 0.86
SMC4-211ENST00000469858 ZBED4O75132 1171 aa20.44■□□□□ 0.86
SMC4-211ENST00000469858 NF2P35240 595 aa20.44■□□□□ 0.86
SMC4-211ENST00000469858 IREB2P48200 963 aaKnown RBP20.44■□□□□ 0.86
SMC4-211ENST00000469858 MORC3Q14149 939 aa20.44■□□□□ 0.86
SMC4-211ENST00000469858 PDIA5Q14554 519 aa20.44■□□□□ 0.86
SMC4-211ENST00000469858 TAF1DQ9H5J8 278 aaPredicted RBP20.44■□□□□ 0.86
SMC4-211ENST00000469858 KCNMB3Q9NPA1 279 aa20.44■□□□□ 0.86
SMC4-211ENST00000469858 HOMER2Q9NSB8 354 aa20.44■□□□□ 0.86
SMC4-211ENST00000469858 PCDHA12Q9UN75 941 aa20.44■□□□□ 0.86
SMC4-211ENST00000469858 FAM86B1E9PN63 330 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 VWA5AO00534 786 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 NFIBO00712 420 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 FAM86B2P0C5J1 330 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 ZNF76P36508 570 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 LRRC15Q8TF66 581 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 CALML4Q96GE6 196 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 WNK4Q96J92 1243 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 IQCA1LA6NCM1 817 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 GTPBP6O43824 516 aaPredicted RBP20.43■□□□□ 0.86
SMC4-211ENST00000469858 CUL4BQ13620 913 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 Q4G0T1 1027 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 CNKSR2Q8WXI2 1034 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 CLEC4DQ8WXI8 215 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 GSDMAQ96QA5 445 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 EHMT1Q9H9B1 1298 aa20.43■□□□□ 0.86
SMC4-211ENST00000469858 CYP3A4P08684 503 aa20.42■□□□□ 0.86
SMC4-211ENST00000469858 FDX1P10109 184 aa20.42■□□□□ 0.86
SMC4-211ENST00000469858 CIITAP33076 1130 aa20.42■□□□□ 0.86
SMC4-211ENST00000469858 UBXN2AP68543 259 aa20.42■□□□□ 0.86
SMC4-211ENST00000469858 TTLL12Q14166 644 aaPredicted RBP20.42■□□□□ 0.86
SMC4-211ENST00000469858 SLFN12Q8IYM2 578 aa20.42■□□□□ 0.86
SMC4-211ENST00000469858 SNX29Q8TEQ0 813 aa20.42■□□□□ 0.86
SMC4-211ENST00000469858 LENG9Q96B70 501 aa20.42■□□□□ 0.86
SMC4-211ENST00000469858 HSD17B4P51659 736 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 MUM1L1Q5H9M0 696 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 KRT79Q5XKE5 535 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 ETNPPLQ8TBG4 499 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 RBM46Q8TBY0 533 aaKnown RBP20.41■□□□□ 0.86
SMC4-211ENST00000469858 CDK5RAP3Q96JB5 506 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 CUEDC2Q9H467 287 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 GRB10Q13322 594 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 MOB2Q70IA6 237 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 MCF2L2Q86YR7 1114 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 MLKLQ8NB16 471 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 CYP2W1Q8TAV3 490 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 TRIM5Q9C035 493 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 ELP3Q9H9T3 547 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 KBTBD4Q9NVX7 518 aa20.41■□□□□ 0.86
SMC4-211ENST00000469858 SMTNL1A8MU46 457 aa20.4■□□□□ 0.86
SMC4-211ENST00000469858 POTECB2RU33 542 aa20.4■□□□□ 0.86
SMC4-211ENST00000469858 DSG3P32926 999 aa20.4■□□□□ 0.86
SMC4-211ENST00000469858 COG2Q14746 738 aa20.4■□□□□ 0.86
SMC4-211ENST00000469858 SH3D19Q5HYK7 790 aa20.4■□□□□ 0.86
SMC4-211ENST00000469858 CATSPERGQ6ZRH7 1159 aa20.4■□□□□ 0.86
SMC4-211ENST00000469858 NUDT12Q9BQG2 462 aa20.4■□□□□ 0.86
SMC4-211ENST00000469858 MAGEF1Q9HAY2 307 aa20.4■□□□□ 0.86
SMC4-211ENST00000469858 DACH1Q9UI36 760 aa20.4■□□□□ 0.86
SMC4-211ENST00000469858 TBX3O15119 743 aa20.39■□□□□ 0.86
SMC4-211ENST00000469858 NCAPHQ15003 741 aa20.39■□□□□ 0.86
SMC4-211ENST00000469858 PNMA5Q96PV4 448 aa20.39■□□□□ 0.86
SMC4-211ENST00000469858 PNMA2Q9UL42 364 aa20.39■□□□□ 0.86
SMC4-211ENST00000469858 IKBKBO14920 756 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms