RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 WDHD1O75717 1129 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 PRPF6O94906 941 aaKnown RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 CCDC175P0C221 793 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 U2AF1L5P0DN76 240 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 GHRP10912 638 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 EIF2AK2P19525 551 aaKnown RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 GJB2P29033 226 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 CNGA1P29973 690 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 TXKP42681 527 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 CCT5P48643 541 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 PSMD7P51665 324 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 HNRNPMP52272 730 aaKnown RBP eCLIP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 PDE1AP54750 535 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 NLRP5P59047 1200 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 IGBP1P78318 339 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 U2AF1Q01081 240 aaKnown RBP eCLIP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 NRG1Q02297 640 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 FAM160A1Q05DH4 1040 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 STIM1Q13586 685 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 NAA25Q14CX7 972 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 LRRC23Q53EV4 343 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 RINLQ6ZS11 566 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 TMC6Q7Z403 805 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 TTC6Q86TZ1 520 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 TRIM74Q86UV6 250 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 TRIM73Q86UV7 250 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 TXNRD3Q86VQ6 643 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 SESTD1Q86VW0 696 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 ARHGEF25Q86VW2 580 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 NCAPG2Q86XI2 1143 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 SIRT2Q8IXJ6 389 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 ELOA2Q8IYF1 753 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 FMR1NBQ8N0W7 255 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 NLGN1Q8N2Q7 840 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 FAM81AQ8TBF8 368 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 COG1Q8WTW3 980 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 HDAC7Q8WUI4 952 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 DHX38Q92620 1227 aaKnown RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 KCNB2Q92953 911 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 CCDC51Q96ER9 411 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 SPACA7Q96KW9 195 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 GDAP1L1Q96MZ0 367 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 NSUN5Q96P11 429 aaKnown RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 LPIN3Q9BQK8 851 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 MKNK1Q9BUB5 465 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 SMG9Q9H0W8 520 aaKnown RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 ANO2Q9NQ90 1003 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 CTNNAL1Q9UBT7 734 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 PRKAG2Q9UGJ0 569 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 LRFN2Q9ULH4 789 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 TTF2Q9UNY4 1162 aaKnown RBP5.43□□□□□ -1.54
SF3B1-207ENST00000468925 PPP2R2CQ9Y2T4 447 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 USP16Q9Y5T5 823 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 CYP46A1Q9Y6A2 500 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 RPS6KL1Q9Y6S9 549 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 CDC42BPBQ9Y5S2 1711 aa5.43□□□□□ -1.54
SF3B1-207ENST00000468925 E7ENQ6 273 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 J3QW42 95 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 NDUFAB1O14561 156 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 KIF3BO15066 747 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 CAND2O75155 1236 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 VAMP4O75379 141 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 GSTA1P08263 222 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 VIMP08670 466 aaKnown RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 GNAI3P08754 354 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 TOP1P11387 765 aaKnown RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 WEE1P30291 646 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 PAPOLAP51003 745 aaKnown RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 RAB27AP51159 221 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 CCNHP51946 323 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 INHBEP58166 350 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 DEUP1Q05D60 604 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 ITIH3Q06033 890 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 FAM69CQ0P6D2 419 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 MRPL58Q14197 206 aaKnown RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 ADGRE1Q14246 886 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 TAF7Q15545 349 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 CMPK2Q5EBM0 449 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 FBXW10Q5XX13 1052 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 MSL1Q68DK7 614 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 CWF19L1Q69YN2 538 aaKnown RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 KRTAP5-3Q6L8H2 238 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 CPLX2Q6PUV4 134 aaKnown RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 MTHFD1LQ6UB35 978 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 CWC27Q6UX04 472 aaKnown RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 TTLL7Q6ZT98 887 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 CCDC121Q6ZUS5 278 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 CACNA2D4Q7Z3S7 1137 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 SPATA21Q7Z572 469 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 ARHGAP22Q7Z5H3 698 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 APBB1IPQ7Z5R6 666 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 TREML1Q86YW5 311 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 DHX40Q8IX18 779 aaKnown RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 CKAP2LQ8IYA6 745 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 NUP133Q8WUM0 1156 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 CLP1Q92989 425 aaKnown RBP5.42□□□□□ -1.54
SF3B1-207ENST00000468925 SPDL1Q96EA4 605 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 BORCS6Q96GS4 357 aa5.42□□□□□ -1.54
SF3B1-207ENST00000468925 PANX2Q96RD6 677 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms