RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 C6orf50Q9HD87 102 aa17.6■□□□□ 0.41
TSPAN4-211ENST00000468468 BTDP43251 543 aa17.6■□□□□ 0.41
TSPAN4-211ENST00000468468 AMPD3Q01432 767 aa17.6■□□□□ 0.41
TSPAN4-211ENST00000468468 MIIPQ5JXC2 388 aa17.6■□□□□ 0.41
TSPAN4-211ENST00000468468 NEK8Q86SG6 692 aa17.6■□□□□ 0.41
TSPAN4-211ENST00000468468 ACBD3Q9H3P7 528 aa17.6■□□□□ 0.41
TSPAN4-211ENST00000468468 CYP27A1Q02318 531 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 MFSD14BQ5SR56 506 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 COL23A1Q86Y22 540 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 HPS3Q969F9 1004 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 CRAMP1Q96RY5 1269 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 VAT1LQ9HCJ6 419 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 DUSP10Q9Y6W6 482 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 RIMBP2O15034 1052 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 PHACTR2O75167 634 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 GNA11P29992 359 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 PPP1R2P41236 205 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 PPP4CP60510 307 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 CKAP4Q07065 602 aaKnown RBP17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 FKBP15Q5T1M5 1219 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 SOGA3Q5TF21 947 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 USP17L2Q6R6M4 530 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 GOLGA5Q8TBA6 731 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 FAM71BQ8TC56 605 aa17.59■□□□□ 0.41
TSPAN4-211ENST00000468468 KLRG2A4D1S0 409 aaPredicted RBP17.58■□□□□ 0.41
TSPAN4-211ENST00000468468 NKRFO15226 690 aaKnown RBP eCLIP17.58■□□□□ 0.416e-6■■□□□ 11.7
TSPAN4-211ENST00000468468 MCM3P25205 808 aa17.58■□□□□ 0.41
TSPAN4-211ENST00000468468 CNNM4Q6P4Q7 775 aa17.58■□□□□ 0.41
TSPAN4-211ENST00000468468 RRP36Q96EU6 259 aaKnown RBP17.58■□□□□ 0.41
TSPAN4-211ENST00000468468 ERGIC2Q96RQ1 377 aa17.58■□□□□ 0.41
TSPAN4-211ENST00000468468 EYA3Q99504 573 aa17.58■□□□□ 0.41
TSPAN4-211ENST00000468468 MACROD2A1Z1Q3 448 aa17.58■□□□□ 0.4
TSPAN4-211ENST00000468468 PPEF1O14829 653 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-211ENST00000468468 LDHCP07864 332 aa17.58■□□□□ 0.4
TSPAN4-211ENST00000468468 ACTN2P35609 894 aa17.58■□□□□ 0.4
TSPAN4-211ENST00000468468 ZSCAN29Q8IWY8 852 aaPredicted RBP17.58■□□□□ 0.4
TSPAN4-211ENST00000468468 CAGE1Q8TC20 777 aa17.58■□□□□ 0.4
TSPAN4-211ENST00000468468 TBCKQ8TEA7 893 aa17.58■□□□□ 0.4
TSPAN4-211ENST00000468468 CALML4Q96GE6 196 aa17.58■□□□□ 0.4
TSPAN4-211ENST00000468468 RPGRIP1Q96KN7 1286 aa17.58■□□□□ 0.4
TSPAN4-211ENST00000468468 MMTAG2Q9BU76 263 aaKnown RBP17.58■□□□□ 0.4
TSPAN4-211ENST00000468468 ZNF287Q9HBT7 754 aa17.58■□□□□ 0.4
TSPAN4-211ENST00000468468 SLC39A2Q9NP94 309 aa17.58■□□□□ 0.4
TSPAN4-211ENST00000468468 RSPH14Q9UHP6 348 aa17.58■□□□□ 0.4
TSPAN4-211ENST00000468468 TNNT3P45378 269 aaPredicted RBP17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 CDK8P49336 464 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 KIF5AQ12840 1032 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 KIAA0895Q8NCT3 520 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 SEMA6BQ9H3T3 888 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 BIN2Q9UBW5 565 aaPredicted RBP17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 SEC63Q9UGP8 760 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 MYH1P12882 1939 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 A0A1W2PQJ5 194 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 ZNF185O15231 689 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 APBA3O96018 575 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 IDEP14735 1019 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 MAP9Q49MG5 647 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 FIGNQ5HY92 759 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 CCDC42Q96M95 316 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 JADE2Q9NQC1 790 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 CHRM1P11229 460 aaPredicted RBP17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 TXKP42681 527 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 VAV2P52735 878 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 SPA17Q15506 151 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 PURBQ96QR8 312 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 PIGSQ96S52 555 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 MED4Q9NPJ6 270 aa17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 CWC15Q9P013 229 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-211ENST00000468468 ANO9A1A5B4 782 aa17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 PLEKP08567 350 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 GTF2IP78347 998 aa17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 CDK17Q00537 523 aa17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 LEKR1Q6ZMV7 388 aa17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 SV2BQ7L1I2 683 aa17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 LRWD1Q9UFC0 647 aa17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 TARSL2A2RTX5 802 aaKnown RBP17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 ZMYND10O75800 440 aa17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 KRT26Q7Z3Y9 468 aa17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 TEX11Q8IYF3 940 aa17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 NEDD1Q8NHV4 660 aa17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 VIPAS39Q9H9C1 493 aa17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 TMEM260Q9NX78 707 aa17.56■□□□□ 0.4
TSPAN4-211ENST00000468468 GPR75-ASB3A0A0A6YYF3 556 aa17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 PDE2AO00408 941 aaPredicted RBP17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 ZNF263O14978 683 aa17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 CCDC96Q2M329 555 aa17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 COBLL1Q53SF7 1204 aa17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 CENPPQ6IPU0 288 aa17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 C16orf86Q6ZW13 317 aa17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 AKT1S1Q96B36 256 aa17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 TSGA10Q9BZW7 698 aa17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 UBA5Q9GZZ9 404 aa17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 GOLGB1Q14789 3259 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 VWA3BQ502W6 1294 aa17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 SP8Q8IXZ3 490 aa17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 REXO1Q8N1G1 1221 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 NAV1Q8NEY1 1877 aa17.55■□□□□ 0.4
TSPAN4-211ENST00000468468 GRB10Q13322 594 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 MSL1Q68DK7 614 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms