RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 FAAP100Q0VG06 881 aa17.09■□□□□ 0.33
COL16A1-208ENST00000468459 RTN1Q16799 776 aa17.09■□□□□ 0.33
COL16A1-208ENST00000468459 TMTC3Q6ZXV5 915 aa17.09■□□□□ 0.33
COL16A1-208ENST00000468459 SRBD1Q8N5C6 995 aaKnown RBP17.09■□□□□ 0.33
COL16A1-208ENST00000468459 NCOA5Q9HCD5 579 aaKnown RBP17.09■□□□□ 0.33
COL16A1-208ENST00000468459 STARD7Q9NQZ5 370 aa17.09■□□□□ 0.33
COL16A1-208ENST00000468459 CYP39A1Q9NYL5 469 aa17.09■□□□□ 0.33
COL16A1-208ENST00000468459 GNEQ9Y223 722 aaKnown RBP17.09■□□□□ 0.33
COL16A1-208ENST00000468459 PLXNA1Q9UIW2 1896 aa17.09■□□□□ 0.33
COL16A1-208ENST00000468459 ELP1O95163 1332 aa17.08■□□□□ 0.32
COL16A1-208ENST00000468459 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-208ENST00000468459 PQBP1O60828 265 aaKnown RBP17.08■□□□□ 0.32
COL16A1-208ENST00000468459 PDIA3P30101 505 aaKnown RBP17.08■□□□□ 0.32
COL16A1-208ENST00000468459 CDK7P50613 346 aa17.08■□□□□ 0.32
COL16A1-208ENST00000468459 EPHB4P54760 987 aa17.08■□□□□ 0.32
COL16A1-208ENST00000468459 QRICH1Q2TAL8 776 aa17.08■□□□□ 0.32
COL16A1-208ENST00000468459 HOMER1Q86YM7 354 aa17.08■□□□□ 0.32
COL16A1-208ENST00000468459 CCDC82Q8N4S0 544 aa17.08■□□□□ 0.32
COL16A1-208ENST00000468459 PIGSQ96S52 555 aa17.08■□□□□ 0.32
COL16A1-208ENST00000468459 CCPG1Q9ULG6 757 aa17.08■□□□□ 0.32
COL16A1-208ENST00000468459 TPCN1Q9ULQ1 816 aa17.08■□□□□ 0.32
COL16A1-208ENST00000468459 STXBP5LQ9Y2K9 1186 aa17.08■□□□□ 0.32
COL16A1-208ENST00000468459 DDX49Q9Y6V7 483 aaKnown RBP17.08■□□□□ 0.32
COL16A1-208ENST00000468459 NID2Q14112 1375 aa17.07■□□□□ 0.32
COL16A1-208ENST00000468459 hCG_1642624A0A1W2PR95 340 aa17.07■□□□□ 0.32
COL16A1-208ENST00000468459 PPP1R11O60927 126 aaPredicted RBP17.07■□□□□ 0.32
COL16A1-208ENST00000468459 LARGE1O95461 756 aa17.07■□□□□ 0.32
COL16A1-208ENST00000468459 ASGR1P07306 291 aa17.07■□□□□ 0.32
COL16A1-208ENST00000468459 C6orf222P0C671 652 aaPredicted RBP17.07■□□□□ 0.32
COL16A1-208ENST00000468459 ADD1P35611 737 aaKnown RBP17.07■□□□□ 0.32
COL16A1-208ENST00000468459 EVCP57679 992 aa17.07■□□□□ 0.32
COL16A1-208ENST00000468459 CCT2P78371 535 aaKnown RBP17.07■□□□□ 0.32
COL16A1-208ENST00000468459 STK3Q13188 491 aa17.07■□□□□ 0.32
COL16A1-208ENST00000468459 USH1GQ495M9 461 aa17.07■□□□□ 0.32
COL16A1-208ENST00000468459 PCSK9Q8NBP7 692 aaKnown RBP17.07■□□□□ 0.32
COL16A1-208ENST00000468459 MORC4Q8TE76 937 aa17.07■□□□□ 0.32
COL16A1-208ENST00000468459 MTMR8Q96EF0 704 aa17.07■□□□□ 0.32
COL16A1-208ENST00000468459 PURBQ96QR8 312 aaKnown RBP17.07■□□□□ 0.32
COL16A1-208ENST00000468459 SPZ1Q9BXG8 430 aa17.07■□□□□ 0.32
COL16A1-208ENST00000468459 RIOX1Q9H6W3 641 aa17.07■□□□□ 0.32
COL16A1-208ENST00000468459 TBX21Q9UL17 535 aa17.07■□□□□ 0.32
COL16A1-208ENST00000468459 BAZ2BQ9UIF8 2168 aaKnown RBP17.06■□□□□ 0.32
COL16A1-208ENST00000468459 CNTNAP5Q8WYK1 1306 aa17.06■□□□□ 0.32
COL16A1-208ENST00000468459 LTBP2Q14767 1821 aa17.06■□□□□ 0.32
COL16A1-208ENST00000468459 ASB14A6NK59 587 aa17.06■□□□□ 0.32
COL16A1-208ENST00000468459 PPFIA3O75145 1194 aa17.06■□□□□ 0.32
COL16A1-208ENST00000468459 RCAN1P53805 252 aa17.06■□□□□ 0.32
COL16A1-208ENST00000468459 FUT2Q10981 343 aa17.06■□□□□ 0.32
COL16A1-208ENST00000468459 TAPT1Q6NXT6 567 aa17.06■□□□□ 0.32
COL16A1-208ENST00000468459 GLT1D1Q96MS3 346 aa17.06■□□□□ 0.32
COL16A1-208ENST00000468459 GUCD1Q96NT3 240 aa17.06■□□□□ 0.32
COL16A1-208ENST00000468459 ALDH8A1Q9H2A2 487 aaPredicted RBP17.06■□□□□ 0.32
COL16A1-208ENST00000468459 RBM28Q9NW13 759 aaKnown RBP17.06■□□□□ 0.32
COL16A1-208ENST00000468459 DTNBO60941 627 aa17.05■□□□□ 0.32
COL16A1-208ENST00000468459 PTGS1P23219 599 aa17.05■□□□□ 0.32
COL16A1-208ENST00000468459 GNAQP50148 359 aa17.05■□□□□ 0.32
COL16A1-208ENST00000468459 TNFAIP2Q03169 654 aa17.05■□□□□ 0.32
COL16A1-208ENST00000468459 RABEP1Q15276 862 aa17.05■□□□□ 0.32
COL16A1-208ENST00000468459 GNASQ5JWF2 1037 aa17.05■□□□□ 0.32
COL16A1-208ENST00000468459 CLEC4DQ8WXI8 215 aa17.05■□□□□ 0.32
COL16A1-208ENST00000468459 LZTS2Q9BRK4 669 aa17.05■□□□□ 0.32
COL16A1-208ENST00000468459 SPC25Q9HBM1 224 aa17.05■□□□□ 0.32
COL16A1-208ENST00000468459 PDGFCQ9NRA1 345 aa17.05■□□□□ 0.32
COL16A1-208ENST00000468459 TMEM39AQ9NV64 488 aa17.05■□□□□ 0.32
COL16A1-208ENST00000468459 DCDC2CA8MYV0 355 aa17.04■□□□□ 0.32
COL16A1-208ENST00000468459 NFIBO00712 420 aa17.04■□□□□ 0.32
COL16A1-208ENST00000468459 ZBTB5O15062 677 aa17.04■□□□□ 0.32
COL16A1-208ENST00000468459 CD2BP2O95400 341 aaKnown RBP17.04■□□□□ 0.32
COL16A1-208ENST00000468459 RAG1P15918 1043 aa17.04■□□□□ 0.32
COL16A1-208ENST00000468459 SMPD1P17405 629 aa17.04■□□□□ 0.32
COL16A1-208ENST00000468459 BAATQ14032 418 aaPredicted RBP17.04■□□□□ 0.32
COL16A1-208ENST00000468459 TMEM63BQ5T3F8 832 aa17.04■□□□□ 0.32
COL16A1-208ENST00000468459 NSMFQ6X4W1 530 aa17.04■□□□□ 0.32
COL16A1-208ENST00000468459 SLC43A3Q8NBI5 491 aa17.04■□□□□ 0.32
COL16A1-208ENST00000468459 ZNF274Q96GC6 653 aaPredicted RBP17.04■□□□□ 0.32
COL16A1-208ENST00000468459 ARVCFO00192 962 aa17.03■□□□□ 0.32
COL16A1-208ENST00000468459 TIMP1P01033 207 aa17.03■□□□□ 0.32
COL16A1-208ENST00000468459 BEX3Q00994 111 aa17.03■□□□□ 0.32
COL16A1-208ENST00000468459 SCRN1Q12765 414 aa17.03■□□□□ 0.32
COL16A1-208ENST00000468459 ANKRD1Q15327 319 aa17.03■□□□□ 0.32
COL16A1-208ENST00000468459 ME3Q16798 604 aa17.03■□□□□ 0.32
COL16A1-208ENST00000468459 FBXO11Q86XK2 927 aa17.03■□□□□ 0.32
COL16A1-208ENST00000468459 FBXO16Q8IX29 292 aaPredicted RBP17.03■□□□□ 0.32
COL16A1-208ENST00000468459 FAM126BQ8IXS8 530 aa17.03■□□□□ 0.32
COL16A1-208ENST00000468459 NECAB1Q8N987 351 aa17.03■□□□□ 0.32
COL16A1-208ENST00000468459 SLC17A8Q8NDX2 589 aa17.03■□□□□ 0.32
COL16A1-208ENST00000468459 RRP36Q96EU6 259 aaKnown RBP17.03■□□□□ 0.32
COL16A1-208ENST00000468459 Q9Y3F1 56 aa17.03■□□□□ 0.32
COL16A1-208ENST00000468459 UNC80Q8N2C7 3258 aa17.03■□□□□ 0.32
COL16A1-208ENST00000468459 VCANP13611 3396 aa17.02■□□□□ 0.32
COL16A1-208ENST00000468459 GRIN2DO15399 1336 aa17.02■□□□□ 0.32
COL16A1-208ENST00000468459 MROH7Q68CQ1 1323 aa17.02■□□□□ 0.32
COL16A1-208ENST00000468459 PNMA6FA0A0J9YX94 578 aa17.02■□□□□ 0.32
COL16A1-208ENST00000468459 A0A0U1RQG5 324 aaPredicted RBP17.02■□□□□ 0.32
COL16A1-208ENST00000468459 SMAD3P84022 425 aaKnown RBP17.02■□□□□ 0.32
COL16A1-208ENST00000468459 ST3GAL1Q11201 340 aa17.02■□□□□ 0.32
COL16A1-208ENST00000468459 NTRK3Q16288 839 aa17.02■□□□□ 0.32
COL16A1-208ENST00000468459 IQSEC1Q6DN90 963 aa17.02■□□□□ 0.32
COL16A1-208ENST00000468459 EEPD1Q7L9B9 569 aa17.02■□□□□ 0.32
COL16A1-208ENST00000468459 TLK2Q86UE8 772 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms