RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 E2F4Q16254 413 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 MUM1L1Q5H9M0 696 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 IGSF22Q8N9C0 903 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 AK8Q96MA6 479 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 UIMC1Q96RL1 719 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 HOOK1Q9UJC3 728 aaKnown RBP23.26■■□□□ 1.31
TMEM53-207ENST00000468117 ADAMTS5Q9UNA0 930 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 PRR29P0C7W0 189 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 KANK3Q6NY19 840 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 MOXD1Q6UVY6 613 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 CEP57L1Q8IYX8 460 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 IQUBQ8NA54 791 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 REPS2Q8NFH8 660 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 MBOAT7Q96N66 472 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 TTC12Q9H892 705 aaPredicted RBP23.26■■□□□ 1.31
TMEM53-207ENST00000468117 TUBE1Q9UJT0 475 aa23.26■■□□□ 1.31
TMEM53-207ENST00000468117 FAM86B1E9PN63 330 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 FAM86B2P0C5J1 330 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 FXR2P51116 673 aaKnown RBP eCLIP23.25■■□□□ 1.31
TMEM53-207ENST00000468117 HSD17B4P51659 736 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 C11orf57Q6ZUT1 292 aaPredicted RBP23.25■■□□□ 1.31
TMEM53-207ENST00000468117 FAM200AQ8TCP9 573 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 CCSER1Q9C0I3 900 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 PCDHA5Q9Y5H7 936 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 MARCH6O60337 910 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 UBXN2AP68543 259 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 ZRSR1Q15695 479 aaKnown RBP23.25■■□□□ 1.31
TMEM53-207ENST00000468117 TMEM266Q2M3C6 531 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 PRR16Q569H4 304 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 RASSF8Q8NHQ8 419 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 DISC1Q9NRI5 854 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 ANO10Q9NW15 660 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 RIPK3Q9Y572 518 aa23.25■■□□□ 1.31
TMEM53-207ENST00000468117 POTEMA6NI47 508 aa23.24■■□□□ 1.31
TMEM53-207ENST00000468117 AFMP43652 599 aa23.24■■□□□ 1.31
TMEM53-207ENST00000468117 ISM2Q6H9L7 571 aa23.24■■□□□ 1.31
TMEM53-207ENST00000468117 GADL1Q6ZQY3 521 aa23.24■■□□□ 1.31
TMEM53-207ENST00000468117 MCF2L2Q86YR7 1114 aa23.24■■□□□ 1.31
TMEM53-207ENST00000468117 OPTNQ96CV9 577 aa23.24■■□□□ 1.31
TMEM53-207ENST00000468117 PAGE5Q96GU1 130 aa23.24■■□□□ 1.31
TMEM53-207ENST00000468117 TRERF1Q96PN7 1200 aa23.24■■□□□ 1.31
TMEM53-207ENST00000468117 PYM1Q9BRP8 204 aaKnown RBP23.24■■□□□ 1.31
TMEM53-207ENST00000468117 HOXC10Q9NYD6 342 aa23.24■■□□□ 1.31
TMEM53-207ENST00000468117 ZNF214Q9UL59 606 aaPredicted RBP23.24■■□□□ 1.31
TMEM53-207ENST00000468117 A0A0G2JLL6 359 aaPredicted RBP23.23■■□□□ 1.31
TMEM53-207ENST00000468117 SPDYE16A6NNV3 312 aaPredicted RBP23.23■■□□□ 1.31
TMEM53-207ENST00000468117 CYP3A4P08684 503 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 ZNF165P49910 485 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 TMEM132BQ14DG7 1078 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 PDXDC2PQ6P474 469 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 PRRT2Q7Z6L0 340 aaPredicted RBP23.23■■□□□ 1.31
TMEM53-207ENST00000468117 CABP7Q86V35 215 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 CYP2W1Q8TAV3 490 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 LENG9Q96B70 501 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 PLIN2Q99541 437 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 KCNMB3Q9NPA1 279 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 COL20A1Q9P218 1284 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 LRWD1Q9UFC0 647 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 USP25Q9UHP3 1055 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 CIITAP33076 1130 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 DPCR1Q3MIW9 517 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 LDLRAD1Q5T700 205 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 SNRNP48Q6IEG0 339 aaKnown RBP23.23■■□□□ 1.31
TMEM53-207ENST00000468117 STAMQ92783 540 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 CCDC34Q96HJ3 373 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 CBX8Q9HC52 389 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 PNMA2Q9UL42 364 aa23.23■■□□□ 1.31
TMEM53-207ENST00000468117 ZNF76P36508 570 aa23.22■■□□□ 1.31
TMEM53-207ENST00000468117 STAT6P42226 847 aa23.22■■□□□ 1.31
TMEM53-207ENST00000468117 PPIL2Q13356 520 aa23.22■■□□□ 1.31
TMEM53-207ENST00000468117 Q4G0T1 1027 aa23.22■■□□□ 1.31
TMEM53-207ENST00000468117 SH3RF1Q7Z6J0 888 aa23.22■■□□□ 1.31
TMEM53-207ENST00000468117 LUZP1Q86V48 1076 aa23.22■■□□□ 1.31
TMEM53-207ENST00000468117 MMTAG2Q9BU76 263 aaKnown RBP23.22■■□□□ 1.31
TMEM53-207ENST00000468117 RAB34Q9BZG1 259 aa23.22■■□□□ 1.31
TMEM53-207ENST00000468117 PCDHA12Q9UN75 941 aa23.22■■□□□ 1.31
TMEM53-207ENST00000468117 CXCL11O14625 94 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 CASP1P29466 404 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 OAZ1P54368 228 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 GHRHRQ02643 423 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 PDIA5Q14554 519 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 NAALADL2Q58DX5 795 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 RRAGBQ5VZM2 374 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 EHMT1Q9H9B1 1298 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 RNF146Q9NTX7 359 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 CCDC39Q9UFE4 941 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 KCNH4Q9UQ05 1017 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 MYPNQ86TC9 1320 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 NLRP12P59046 1061 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 PROCA1Q8NCQ7 364 aaPredicted RBP23.21■■□□□ 1.31
TMEM53-207ENST00000468117 ETNPPLQ8TBG4 499 aa23.21■■□□□ 1.31
TMEM53-207ENST00000468117 CAVIN2O95810 425 aa23.2■■□□□ 1.3
TMEM53-207ENST00000468117 RPS6P62753 249 aaKnown RBP23.2■■□□□ 1.3
TMEM53-207ENST00000468117 UVSSAQ2YD98 709 aa23.2■■□□□ 1.3
TMEM53-207ENST00000468117 LRRC15Q8TF66 581 aa23.2■■□□□ 1.3
TMEM53-207ENST00000468117 MTRQ99707 1265 aa23.2■■□□□ 1.3
TMEM53-207ENST00000468117 NMRK2Q9NPI5 230 aa23.2■■□□□ 1.3
TMEM53-207ENST00000468117 PLCG1P19174 1290 aa23.2■■□□□ 1.3
TMEM53-207ENST00000468117 PLS1Q14651 629 aa23.2■■□□□ 1.3
TMEM53-207ENST00000468117 NSMFQ6X4W1 530 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms