RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 CHST13Q8NET6 341 aa14.14□□□□□ -0.15
VPS26A-204ENST00000467852 RNF25Q96BH1 459 aaPredicted RBP14.14□□□□□ -0.15
VPS26A-204ENST00000467852 MSLNLQ96KJ4 702 aa14.14□□□□□ -0.15
VPS26A-204ENST00000467852 SLF1Q9BQI6 1058 aa14.14□□□□□ -0.15
VPS26A-204ENST00000467852 INCENPQ9NQS7 918 aa14.14□□□□□ -0.15
VPS26A-204ENST00000467852 PDGFCQ9NRA1 345 aa14.14□□□□□ -0.15
VPS26A-204ENST00000467852 SNRKQ9NRH2 765 aa14.14□□□□□ -0.15
VPS26A-204ENST00000467852 PCDHGC5Q9Y5F6 944 aa14.14□□□□□ -0.15
VPS26A-204ENST00000467852 MYO10Q9HD67 2058 aa14.14□□□□□ -0.15
VPS26A-204ENST00000467852 NAV1Q8NEY1 1877 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 USP17L12C9JPN9 530 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 USP17L21D6R901 530 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 ATP2A1O14983 1001 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 LINC01565O15544 149 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 ZBED4O75132 1171 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 GTF2F1P35269 517 aaKnown RBP eCLIP14.13□□□□□ -0.15
VPS26A-204ENST00000467852 CNTN2Q02246 1040 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 PTGISQ16647 500 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 RSPO4Q2I0M5 234 aaPredicted RBP14.13□□□□□ -0.15
VPS26A-204ENST00000467852 FAM83BQ5T0W9 1011 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 KIAA1211Q6ZU35 1233 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 CLEC10AQ8IUN9 316 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 MYOCDQ8IZQ8 938 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 MIGA1Q8NAN2 632 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 SMRP1Q8NCR6 262 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 PPP2R3CQ969Q6 453 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 YME1L1Q96TA2 773 aa14.13□□□□□ -0.15
VPS26A-204ENST00000467852 NBNO60934 754 aa14.12□□□□□ -0.15
VPS26A-204ENST00000467852 SDHBP21912 280 aa14.12□□□□□ -0.15
VPS26A-204ENST00000467852 COASYQ13057 564 aa14.12□□□□□ -0.15
VPS26A-204ENST00000467852 TCTN1Q2MV58 587 aa14.12□□□□□ -0.15
VPS26A-204ENST00000467852 KIAA0319Q5VV43 1072 aa14.12□□□□□ -0.15
VPS26A-204ENST00000467852 TAPT1Q6NXT6 567 aa14.12□□□□□ -0.15
VPS26A-204ENST00000467852 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.12□□□□□ -0.15
VPS26A-204ENST00000467852 EEPD1Q7L9B9 569 aa14.12□□□□□ -0.15
VPS26A-204ENST00000467852 PPP1R13LQ8WUF5 828 aa14.12□□□□□ -0.15
VPS26A-204ENST00000467852 SH2B1Q9NRF2 756 aaPredicted RBP14.12□□□□□ -0.15
VPS26A-204ENST00000467852 FRYLO94915 3013 aa14.12□□□□□ -0.15
VPS26A-204ENST00000467852 KPNA6O60684 536 aa14.11□□□□□ -0.15
VPS26A-204ENST00000467852 UBTFL1P0CB47 393 aaPredicted RBP14.11□□□□□ -0.15
VPS26A-204ENST00000467852 DUSP28Q4G0W2 176 aa14.11□□□□□ -0.15
VPS26A-204ENST00000467852 FAM133AQ8N9E0 248 aa14.11□□□□□ -0.15
VPS26A-204ENST00000467852 PRPF38AQ8NAV1 312 aaKnown RBP14.11□□□□□ -0.15
VPS26A-204ENST00000467852 DCBLD2Q96PD2 775 aa14.11□□□□□ -0.15
VPS26A-204ENST00000467852 HAUS7Q99871 368 aa14.11□□□□□ -0.15
VPS26A-204ENST00000467852 C11orf84Q9BUA3 381 aaPredicted RBP14.11□□□□□ -0.15
VPS26A-204ENST00000467852 MFSD1Q9H3U5 465 aa14.11□□□□□ -0.15
VPS26A-204ENST00000467852 USP15Q9Y4E8 981 aaPredicted RBP14.11□□□□□ -0.15
VPS26A-204ENST00000467852 GPR179Q6PRD1 2367 aa14.11□□□□□ -0.15
VPS26A-204ENST00000467852 CYP2E1P05181 493 aaPredicted RBP14.1□□□□□ -0.15
VPS26A-204ENST00000467852 RB1P06400 928 aa14.1□□□□□ -0.15
VPS26A-204ENST00000467852 CLCN5P51795 746 aa14.1□□□□□ -0.15
VPS26A-204ENST00000467852 TMEM63BQ5T3F8 832 aa14.1□□□□□ -0.15
VPS26A-204ENST00000467852 FBXO16Q8IX29 292 aaPredicted RBP14.1□□□□□ -0.15
VPS26A-204ENST00000467852 UBALD2Q8IYN6 164 aa14.1□□□□□ -0.15
VPS26A-204ENST00000467852 RAVER2Q9HCJ3 691 aaKnown RBP14.1□□□□□ -0.15
VPS26A-204ENST00000467852 VTA1Q9NP79 307 aa14.1□□□□□ -0.15
VPS26A-204ENST00000467852 SWAP70Q9UH65 585 aa14.1□□□□□ -0.15
VPS26A-204ENST00000467852 HDAC5Q9UQL6 1122 aa14.1□□□□□ -0.15
VPS26A-204ENST00000467852 COG6Q9Y2V7 657 aa14.1□□□□□ -0.15
VPS26A-204ENST00000467852 GRM6O15303 877 aa14.09□□□□□ -0.15
VPS26A-204ENST00000467852 EEF2P13639 858 aaKnown RBP14.09□□□□□ -0.15
VPS26A-204ENST00000467852 ATF7P17544 494 aaPredicted RBP14.09□□□□□ -0.15
VPS26A-204ENST00000467852 CTNNB1P35222 781 aa14.09□□□□□ -0.15
VPS26A-204ENST00000467852 CHMP4BP1P59074 171 aa14.09□□□□□ -0.15
VPS26A-204ENST00000467852 TTC39AQ5SRH9 613 aa14.09□□□□□ -0.15
VPS26A-204ENST00000467852 CLEC1BQ9P126 229 aa14.09□□□□□ -0.15
VPS26A-204ENST00000467852 RAD50Q92878 1312 aa14.09□□□□□ -0.15
VPS26A-204ENST00000467852 CKBP12277 381 aa14.08□□□□□ -0.16
VPS26A-204ENST00000467852 AKR1B1P15121 316 aa14.08□□□□□ -0.16
VPS26A-204ENST00000467852 MTMR3Q13615 1198 aa14.08□□□□□ -0.16
VPS26A-204ENST00000467852 ANGPT1Q15389 498 aa14.08□□□□□ -0.16
VPS26A-204ENST00000467852 KREMEN2Q8NCW0 462 aa14.08□□□□□ -0.16
VPS26A-204ENST00000467852 OR6J1Q8NGC5 347 aa14.08□□□□□ -0.16
VPS26A-204ENST00000467852 CYP2W1Q8TAV3 490 aa14.08□□□□□ -0.16
VPS26A-204ENST00000467852 CCDC17Q96LX7 622 aa14.08□□□□□ -0.16
VPS26A-204ENST00000467852 HOMER2Q9NSB8 354 aa14.08□□□□□ -0.16
VPS26A-204ENST00000467852 MCM9Q9NXL9 1143 aa14.08□□□□□ -0.16
VPS26A-204ENST00000467852 RWDD3Q9Y3V2 267 aa14.08□□□□□ -0.16
VPS26A-204ENST00000467852 PTPRCP08575 1304 aa14.08□□□□□ -0.16
VPS26A-204ENST00000467852 OTOGLQ3ZCN5 2332 aa14.08□□□□□ -0.16
VPS26A-204ENST00000467852 SETXQ7Z333 2677 aaKnown RBP14.07□□□□□ -0.16
VPS26A-204ENST00000467852 E9PSI1 815 aa14.07□□□□□ -0.16
VPS26A-204ENST00000467852 C5orf67F2Z3F1 127 aa14.07□□□□□ -0.16
VPS26A-204ENST00000467852 LGR5O75473 907 aa14.07□□□□□ -0.16
VPS26A-204ENST00000467852 UPP2O95045 317 aa14.07□□□□□ -0.16
VPS26A-204ENST00000467852 RBL2Q08999 1139 aa14.07□□□□□ -0.16
VPS26A-204ENST00000467852 CCDC158Q5M9N0 1113 aa14.07□□□□□ -0.16
VPS26A-204ENST00000467852 WDR63Q8IWG1 891 aa14.07□□□□□ -0.16
VPS26A-204ENST00000467852 FIBCD1Q8N539 461 aa14.07□□□□□ -0.16
VPS26A-204ENST00000467852 EFHBQ8N7U6 833 aa14.07□□□□□ -0.16
VPS26A-204ENST00000467852 RUBCNQ92622 972 aa14.07□□□□□ -0.16
VPS26A-204ENST00000467852 WDR11Q9BZH6 1224 aa14.07□□□□□ -0.16
VPS26A-204ENST00000467852 ACAD9Q9H845 621 aa14.07□□□□□ -0.16
VPS26A-204ENST00000467852 KANSL2Q9H9L4 492 aa14.07□□□□□ -0.16
VPS26A-204ENST00000467852 IDH1O75874 414 aaKnown RBP14.06□□□□□ -0.16
VPS26A-204ENST00000467852 CSPG5O95196 566 aa14.06□□□□□ -0.16
VPS26A-204ENST00000467852 HOXB3P14651 431 aaPredicted RBP14.06□□□□□ -0.16
VPS26A-204ENST00000467852 BMPR1AP36894 532 aa14.06□□□□□ -0.16
VPS26A-204ENST00000467852 OAZ1P54368 228 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms