RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 ERICH6BQ5W0A0 696 aa21.05■□□□□ 0.96
CGREF1-208ENST00000467539 NFXL1Q6ZNB6 911 aa21.05■□□□□ 0.96
CGREF1-208ENST00000467539 HOMER1Q86YM7 354 aa21.05■□□□□ 0.96
CGREF1-208ENST00000467539 RASEFQ8IZ41 740 aa21.05■□□□□ 0.96
CGREF1-208ENST00000467539 SCFD2Q8WU76 684 aa21.05■□□□□ 0.96
CGREF1-208ENST00000467539 SPZ1Q9BXG8 430 aa21.05■□□□□ 0.96
CGREF1-208ENST00000467539 A0A0U1RQG5 324 aaPredicted RBP21.04■□□□□ 0.96
CGREF1-208ENST00000467539 KIAA0355O15063 1070 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 PQBP1O60828 265 aaKnown RBP21.04■□□□□ 0.96
CGREF1-208ENST00000467539 CALM1P0DP23 149 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 CALM2P0DP24 149 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 CALM3P0DP25 149 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 PTGS1P23219 599 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 FAAP100Q0VG06 881 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 STXBP2Q15833 593 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 ARHGEF16Q5VV41 709 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 SGMS1Q86VZ5 419 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 TDHQ8IZJ6 230 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 SLC43A3Q8NBI5 491 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 MYL10Q9BUA6 226 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 SEZ6LQ9BYH1 1024 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 PRDM5Q9NQX1 630 aaPredicted RBP21.04■□□□□ 0.96
CGREF1-208ENST00000467539 PCDH10Q9P2E7 1040 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 MROH7Q68CQ1 1323 aa21.04■□□□□ 0.96
CGREF1-208ENST00000467539 KRT32Q14532 448 aa21.03■□□□□ 0.96
CGREF1-208ENST00000467539 CXCL17Q6UXB2 119 aa21.03■□□□□ 0.96
CGREF1-208ENST00000467539 DHX32Q7L7V1 743 aaKnown RBP21.03■□□□□ 0.96
CGREF1-208ENST00000467539 KCNB2Q92953 911 aa21.03■□□□□ 0.96
CGREF1-208ENST00000467539 TMEM39AQ9NV64 488 aa21.03■□□□□ 0.96
CGREF1-208ENST00000467539 SLC12A7Q9Y666 1083 aa21.03■□□□□ 0.96
CGREF1-208ENST00000467539 EIF3JO75822 258 aaKnown RBP21.02■□□□□ 0.96
CGREF1-208ENST00000467539 NR3C2P08235 984 aa21.02■□□□□ 0.96
CGREF1-208ENST00000467539 TXNP10599 105 aaKnown RBP21.02■□□□□ 0.96
CGREF1-208ENST00000467539 TTLL4Q14679 1199 aa21.02■□□□□ 0.96
CGREF1-208ENST00000467539 LRIT3Q3SXY7 679 aa21.02■□□□□ 0.96
CGREF1-208ENST00000467539 CCDC62Q6P9F0 684 aa21.02■□□□□ 0.96
CGREF1-208ENST00000467539 SRBD1Q8N5C6 995 aaKnown RBP21.02■□□□□ 0.96
CGREF1-208ENST00000467539 FANCBQ8NB91 859 aa21.02■□□□□ 0.96
CGREF1-208ENST00000467539 BADQ92934 168 aa21.02■□□□□ 0.96
CGREF1-208ENST00000467539 RRP36Q96EU6 259 aaKnown RBP21.02■□□□□ 0.96
CGREF1-208ENST00000467539 LRRC2Q9BYS8 371 aa21.02■□□□□ 0.96
CGREF1-208ENST00000467539 PXMP2Q9NR77 195 aa21.02■□□□□ 0.96
CGREF1-208ENST00000467539 PPP4R2Q9NY27 417 aa21.02■□□□□ 0.96
CGREF1-208ENST00000467539 BAZ2BQ9UIF8 2168 aaKnown RBP21.02■□□□□ 0.95
CGREF1-208ENST00000467539 GCOM1H8Y6P7 765 aaPredicted RBP21.01■□□□□ 0.95
CGREF1-208ENST00000467539 POLR2MP0CAP2 368 aa21.01■□□□□ 0.95
CGREF1-208ENST00000467539 ITGB8P26012 769 aa21.01■□□□□ 0.95
CGREF1-208ENST00000467539 CPT1AP50416 773 aa21.01■□□□□ 0.95
CGREF1-208ENST00000467539 PPP2R5BQ15173 497 aa21.01■□□□□ 0.95
CGREF1-208ENST00000467539 ADCK5Q3MIX3 580 aa21.01■□□□□ 0.95
CGREF1-208ENST00000467539 OR6J1Q8NGC5 347 aa21.01■□□□□ 0.95
CGREF1-208ENST00000467539 POLR3EQ9NVU0 708 aa21.01■□□□□ 0.95
CGREF1-208ENST00000467539 A6NJR5 290 aa21■□□□□ 0.95
CGREF1-208ENST00000467539 HMGB1P09429 215 aaKnown RBP21■□□□□ 0.95
CGREF1-208ENST00000467539 RAG1P15918 1043 aa21■□□□□ 0.95
CGREF1-208ENST00000467539 EIF2AK2P19525 551 aaKnown RBP21■□□□□ 0.95
CGREF1-208ENST00000467539 ITGA7Q13683 1181 aa21■□□□□ 0.95
CGREF1-208ENST00000467539 SYNE3Q6ZMZ3 975 aa21■□□□□ 0.95
CGREF1-208ENST00000467539 VSIG10LQ86VR7 867 aa21■□□□□ 0.95
CGREF1-208ENST00000467539 GRIN2DO15399 1336 aa21■□□□□ 0.95
CGREF1-208ENST00000467539 MYH6P13533 1939 aa21■□□□□ 0.95
CGREF1-208ENST00000467539 KPNA6O60684 536 aa20.99■□□□□ 0.95
CGREF1-208ENST00000467539 ARIH2O95376 493 aa20.99■□□□□ 0.95
CGREF1-208ENST00000467539 PLEKHA8P1O95397 391 aa20.99■□□□□ 0.95
CGREF1-208ENST00000467539 CD4P01730 458 aa20.99■□□□□ 0.95
CGREF1-208ENST00000467539 HOXA13P31271 388 aaPredicted RBP20.99■□□□□ 0.95
CGREF1-208ENST00000467539 BRDTQ58F21 947 aaPredicted RBP20.99■□□□□ 0.95
CGREF1-208ENST00000467539 SEPT14Q6ZU15 432 aa20.99■□□□□ 0.95
CGREF1-208ENST00000467539 FAM126BQ8IXS8 530 aa20.99■□□□□ 0.95
CGREF1-208ENST00000467539 PIBF1Q8WXW3 757 aa20.99■□□□□ 0.95
CGREF1-208ENST00000467539 COPS5Q92905 334 aa20.99■□□□□ 0.95
CGREF1-208ENST00000467539 PDCD2LQ9BRP1 358 aa20.99■□□□□ 0.95
CGREF1-208ENST00000467539 TBX21Q9UL17 535 aa20.99■□□□□ 0.95
CGREF1-208ENST00000467539 SOX1O00570 391 aaPredicted RBP20.98■□□□□ 0.95
CGREF1-208ENST00000467539 TLR3O15455 904 aaKnown RBP20.98■□□□□ 0.95
CGREF1-208ENST00000467539 TIMP1P01033 207 aa20.98■□□□□ 0.95
CGREF1-208ENST00000467539 RXRAP19793 462 aa20.98■□□□□ 0.95
CGREF1-208ENST00000467539 HSPA4P34932 840 aa20.98■□□□□ 0.95
CGREF1-208ENST00000467539 PURAQ00577 322 aaKnown RBP20.98■□□□□ 0.95
CGREF1-208ENST00000467539 SEC63Q9UGP8 760 aaKnown RBP20.98■□□□□ 0.95
CGREF1-208ENST00000467539 DDX41Q9UJV9 622 aaKnown RBP20.98■□□□□ 0.95
CGREF1-208ENST00000467539 LRRC37A2A6NM11 1700 aa20.98■□□□□ 0.95
CGREF1-208ENST00000467539 REC8O95072 547 aa20.97■□□□□ 0.95
CGREF1-208ENST00000467539 LY6KQ17RY6 165 aa20.97■□□□□ 0.95
CGREF1-208ENST00000467539 GPR153Q6NV75 609 aa20.97■□□□□ 0.95
CGREF1-208ENST00000467539 CMTR1Q8N1G2 835 aaKnown RBP20.97■□□□□ 0.95
CGREF1-208ENST00000467539 EPB41L2O43491 1005 aaKnown RBP20.96■□□□□ 0.95
CGREF1-208ENST00000467539 GH1P01241 217 aa20.96■□□□□ 0.95
CGREF1-208ENST00000467539 MYL3P08590 195 aa20.96■□□□□ 0.95
CGREF1-208ENST00000467539 MYCLP12524 364 aaPredicted RBP20.96■□□□□ 0.95
CGREF1-208ENST00000467539 PGM5Q15124 567 aa20.96■□□□□ 0.95
CGREF1-208ENST00000467539 KCNV1Q6PIU1 500 aa20.96■□□□□ 0.95
CGREF1-208ENST00000467539 APOA5Q6Q788 366 aa20.96■□□□□ 0.95
CGREF1-208ENST00000467539 TMTC3Q6ZXV5 915 aa20.96■□□□□ 0.95
CGREF1-208ENST00000467539 FCHSD1Q86WN1 690 aa20.96■□□□□ 0.95
CGREF1-208ENST00000467539 LRCH3Q96II8 777 aa20.96■□□□□ 0.95
CGREF1-208ENST00000467539 MTG1Q9BT17 334 aaPredicted RBP20.96■□□□□ 0.95
CGREF1-208ENST00000467539 BRPF3Q9ULD4 1205 aa20.96■□□□□ 0.95
CGREF1-208ENST00000467539 SNX14Q9Y5W7 946 aa20.96■□□□□ 0.95
CGREF1-208ENST00000467539 SZT2Q5T011 3432 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms