RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 SKIV2L2P42285 1042 aaKnown RBP8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 C6orf118Q5T5N4 469 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 LRRC49Q8IUZ0 686 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 UPF1Q92900 1129 aaKnown RBP eCLIP8.57□□□□□ -1.041e-7■■■□□ 16.2
SPTBN1-204ENST00000467371 LSM14BQ9BX40 385 aaKnown RBP8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 TRMT13Q9NUP7 481 aaKnown RBP8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 REREQ9P2R6 1566 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 PIK3C2GO75747 1445 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 NSD3Q9BZ95 1437 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 SP140Q13342 867 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 PPP2R5DQ14738 602 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 TSGA10IPQ3SY00 556 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 MEI1Q5TIA1 1274 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 POTEEQ6S8J3 1075 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 NSUN6Q8TEA1 469 aaKnown RBP8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 KCTD13Q8WZ19 329 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 NAF1Q96HR8 494 aaKnown RBP8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 NACA2Q9H009 215 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 AIPL1Q9NZN9 384 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 POLKQ9UBT6 870 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 HARSP12081 509 aaKnown RBP8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 MTHFRP42898 656 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 PIP4K2BP78356 416 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 CCDC122Q5T0U0 273 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 SAPCD2Q86UD0 394 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 ZNF540Q8NDQ6 660 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 ANKK1Q8NFD2 765 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 CHFRQ96EP1 664 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 RMDN3Q96TC7 470 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 KCNF1Q9H3M0 494 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 HELLSQ9NRZ9 838 aa8.57□□□□□ -1.04
SPTBN1-204ENST00000467371 SYNJ2BP-COX16A0A087WUM0 186 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 LOC102724428A0A0B4J2F2 783 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 POTEFA5A3E0 1075 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 SMAD7O15105 426 aaKnown RBP8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 CYP1A2P05177 515 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 POLR2BP30876 1174 aaKnown RBP8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 ATP6V1AP38606 617 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 SIK1P57059 783 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 SKOR1P84550 965 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 NAA30Q147X3 362 aaPredicted RBP8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 MINDY4Q4G0A6 757 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 WWC2Q6AWC2 1192 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 TRAF7Q6Q0C0 670 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 CCDC116Q8IYX3 515 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 TPCN2Q8NHX9 752 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 COG5Q9UP83 839 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 C17orf113A0A1B0GUU1 675 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 FOXD2O60548 495 aaPredicted RBP8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 MT-ND3P03897 115 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 DNTTP04053 509 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 GRK6P43250 576 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 GSCP56915 257 aaPredicted RBP8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 EN1Q05925 392 aaPredicted RBP8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 KMT5BQ4FZB7 885 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 RUFY3Q7L099 469 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 NTPCRQ9BSD7 190 aaKnown RBP8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 UNC45AQ9H3U1 944 aa8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 ZNHIT6Q9NWK9 470 aaKnown RBP8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 NSFL1CQ9UNZ2 370 aaKnown RBP8.56□□□□□ -1.04
SPTBN1-204ENST00000467371 F8W031 263 aaPredicted RBP8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 ATP6V1E1P36543 226 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 PRPF4BQ13523 1007 aaKnown RBP8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 TRIM14Q14142 442 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 GPR158Q5T848 1215 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 EPM2AIP1Q7L775 607 aaPredicted RBP8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 ZER1Q7Z7L7 766 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 SHDQ96IW2 340 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 RSAD1Q9HA92 442 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 ANLNQ9NQW6 1124 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 PCDHGC3Q9UN70 934 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 DUSP12Q9UNI6 340 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 MAPK8IP1Q9UQF2 711 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 TMEM98Q9Y2Y6 226 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 MTF2Q9Y483 593 aaPredicted RBP8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 CLTCL1P53675 1640 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 PREX2Q70Z35 1606 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 DUOX2Q9NRD8 1548 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 MYO1BO43795 1136 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 TMEM127O75204 238 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 FDX1P10109 184 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 KIF4BQ2VIQ3 1234 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 TBC1D21Q8IYX1 336 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 RNF214Q8ND24 703 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 HDAC7Q8WUI4 952 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 CHCHD6Q9BRQ6 235 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 SPON2Q9BUD6 331 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 UTP14AQ9BVJ6 771 aaKnown RBP8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 ST7Q9NRC1 585 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 DKK3Q9UBP4 350 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 ZDHHC9Q9Y397 364 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 CD109Q6YHK3 1445 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 CFAP99D6REC4 459 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 DDX58O95786 925 aaKnown RBP8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 CCDC178Q5BJE1 867 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 AP1ARQ63HQ0 302 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 MFSD6Q6ZSS7 791 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 ENOSF1Q7L5Y1 443 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 FAM169BQ8N8A8 192 aa8.55□□□□□ -1.04
SPTBN1-204ENST00000467371 EAF1Q96JC9 268 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms