RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 CYTH3O43739 400 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 N4BP1O75113 896 aaKnown RBP16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 UBA7P41226 1012 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 IRX5P78411 483 aaPredicted RBP16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 ZSCAN26Q16670 478 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 APOBEC3HQ6NTF7 200 aaKnown RBP16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 DHTKD1Q96HY7 919 aaPredicted RBP16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 TRIM47Q96LD4 638 aa16.46■□□□□ 0.23
PRPF38B-204ENST00000467302 STXBP3O00186 592 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 GOLGA8HP0CJ92 632 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 INF2Q27J81 1249 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 GRIPAP1Q4V328 841 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 CCDC148Q8NFR7 591 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 BARHL2Q9NY43 387 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 VPS18Q9P253 973 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 HDAC6Q9UBN7 1215 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 PSME4Q14997 1843 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 B4DLN1 442 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 ATP1A1P05023 1023 aaKnown RBP16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 HLA-DOAP06340 250 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 LMAN1P49257 510 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 USP14P54578 494 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 KRT83P78385 493 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 TSR1Q2NL82 804 aaKnown RBP16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 RETREG2Q8NC44 543 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 GOLGA5Q8TBA6 731 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 TUBGCP2Q9BSJ2 902 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 CUEDC2Q9H467 287 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 MAGEF1Q9HAY2 307 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 MAGEC2Q9UBF1 373 aaPredicted RBP16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 SERPINB13Q9UIV8 391 aa16.45■□□□□ 0.22
PRPF38B-204ENST00000467302 ENC1O14682 589 aa16.44■□□□□ 0.22
PRPF38B-204ENST00000467302 RAD51AP2Q09MP3 1159 aa16.44■□□□□ 0.22
PRPF38B-204ENST00000467302 CCDC122Q5T0U0 273 aa16.44■□□□□ 0.22
PRPF38B-204ENST00000467302 RASSF8Q8NHQ8 419 aa16.44■□□□□ 0.22
PRPF38B-204ENST00000467302 NUP58Q9BVL2 599 aa16.44■□□□□ 0.22
PRPF38B-204ENST00000467302 SPZ1Q9BXG8 430 aa16.44■□□□□ 0.22
PRPF38B-204ENST00000467302 AGPAT5Q9NUQ2 364 aa16.44■□□□□ 0.22
PRPF38B-204ENST00000467302 EXOC1Q9NV70 894 aa16.44■□□□□ 0.22
PRPF38B-204ENST00000467302 TFR2Q9UP52 801 aa16.44■□□□□ 0.22
PRPF38B-204ENST00000467302 SAR1BQ9Y6B6 198 aa16.44■□□□□ 0.22
PRPF38B-204ENST00000467302 GREB1LQ9C091 1923 aaPredicted RBP16.44■□□□□ 0.22
PRPF38B-204ENST00000467302 LRRIQ3A6PVS8 624 aaPredicted RBP16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 AOC3Q16853 763 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 USP17L2Q6R6M4 530 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 HEATR3Q7Z4Q2 680 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 KIAA0825Q8IV33 1275 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 CSGALNACT2Q8N6G5 542 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 EHBP1Q8NDI1 1231 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 AK8Q96MA6 479 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 MMS19Q96T76 1030 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 PLIN2Q99541 437 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 EHD4Q9H223 541 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 MTMR4Q9NYA4 1195 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 RCCD1A6NED2 376 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 PES1O00541 588 aaKnown RBP16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 CAPN2P17655 700 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 PLCG1P19174 1290 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 CCNE1P24864 410 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 SMARCA1P28370 1054 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 ACTN2P35609 894 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 ZBED6P86452 979 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 CCDC170Q8IYT3 715 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 FAM71BQ8TC56 605 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 P2RX5Q93086 422 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 PURBQ96QR8 312 aaKnown RBP16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 TRIM9Q9C026 710 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 LACRTQ9GZZ8 138 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 VIPAS39Q9H9C1 493 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 FAN1Q9Y2M0 1017 aa16.43■□□□□ 0.22
PRPF38B-204ENST00000467302 IGKV6D-41A0A0C4DH26 115 aa16.42■□□□□ 0.22
PRPF38B-204ENST00000467302 EIF3CLB5ME19 914 aaKnown RBP16.42■□□□□ 0.22
PRPF38B-204ENST00000467302 AKR1B1P15121 316 aa16.42■□□□□ 0.22
PRPF38B-204ENST00000467302 CYLC1P35663 651 aaPredicted RBP16.42■□□□□ 0.22
PRPF38B-204ENST00000467302 ANKRD40Q6AI12 368 aa16.42■□□□□ 0.22
PRPF38B-204ENST00000467302 ZSCAN29Q8IWY8 852 aaPredicted RBP16.42■□□□□ 0.22
PRPF38B-204ENST00000467302 EIF3CQ99613 913 aaKnown RBP16.42■□□□□ 0.22
PRPF38B-204ENST00000467302 C7orf25Q9BPX7 421 aa16.42■□□□□ 0.22
PRPF38B-204ENST00000467302 NHEJ1Q9H9Q4 299 aaPredicted RBP16.42■□□□□ 0.22
PRPF38B-204ENST00000467302 SERPINA10Q9UK55 444 aa16.42■□□□□ 0.22
PRPF38B-204ENST00000467302 KIF13BQ9NQT8 1826 aa16.42■□□□□ 0.22
PRPF38B-204ENST00000467302 BICDL2A1A5D9 508 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 TARSL2A2RTX5 802 aaKnown RBP16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 KRT86O43790 486 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 TRIM21P19474 475 aaKnown RBP16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 KLK7P49862 253 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 RBM5P52756 815 aaKnown RBP eCLIP16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 CDK17Q00537 523 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 TBC1D8BQ0IIM8 1120 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 MIIPQ5JXC2 388 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 SLC16A10Q8TF71 515 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 JAKMIP2Q96AA8 810 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 RPGRIP1Q96KN7 1286 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 ZMYND12Q9H0C1 365 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 MED4Q9NPJ6 270 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 SIPA1L1O43166 1804 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 A0A1W2PQJ5 194 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 USP17L5A8MUK1 530 aa16.41■□□□□ 0.22
PRPF38B-204ENST00000467302 SRGAP2O75044 1071 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms