RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 HOMER2Q9NSB8 354 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 RBPJLQ9UBG7 517 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 TLL2Q9Y6L7 1015 aa14.78□□□□□ -0.04
COL4A1-202ENST00000467182 A0A1B0GVL5 298 aa14.77□□□□□ -0.05
COL4A1-202ENST00000467182 LAD1O00515 517 aa14.77□□□□□ -0.05
COL4A1-202ENST00000467182 NEMFO60524 1076 aa14.77□□□□□ -0.05
COL4A1-202ENST00000467182 PRPHP41219 470 aa14.77□□□□□ -0.05
COL4A1-202ENST00000467182 NDUFA8P51970 172 aa14.77□□□□□ -0.05
COL4A1-202ENST00000467182 FCHSD1Q86WN1 690 aa14.77□□□□□ -0.05
COL4A1-202ENST00000467182 RIOX2Q8IUF8 465 aa14.77□□□□□ -0.05
COL4A1-202ENST00000467182 MAF1Q9H063 256 aa14.77□□□□□ -0.05
COL4A1-202ENST00000467182 PDHXO00330 501 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 SLC10A3P09131 477 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 OR52Z1P0C646 297 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 PFKFB1P16118 471 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 GCFC2P16383 781 aaKnown RBP14.76□□□□□ -0.05
COL4A1-202ENST00000467182 RPS6P62753 249 aaKnown RBP14.76□□□□□ -0.05
COL4A1-202ENST00000467182 FAM160A1Q05DH4 1040 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 Q4G0T1 1027 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 SPECC1Q5M775 1068 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 RGMBQ6NW40 437 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 USP49Q70CQ1 688 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 FAM43AQ8N2R8 423 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 LENG9Q96B70 501 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 NAP1L4Q99733 375 aaKnown RBP14.76□□□□□ -0.05
COL4A1-202ENST00000467182 SPATC1LQ9H0A9 340 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 R3HDMLQ9H3Y0 253 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 DACT1Q9NYF0 836 aa14.76□□□□□ -0.05
COL4A1-202ENST00000467182 IGLV3-22A0A075B6J6 115 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 VWA3AA6NCI4 1184 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 FAM155AB1AL88 458 aaPredicted RBP14.75□□□□□ -0.05
COL4A1-202ENST00000467182 FAM86B1E9PN63 330 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 TOMM70O94826 608 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 FAM86B2P0C5J1 330 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 CYP2C8P10632 490 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 ZNF157P51786 506 aaPredicted RBP14.75□□□□□ -0.05
COL4A1-202ENST00000467182 BAATQ14032 418 aaPredicted RBP14.75□□□□□ -0.05
COL4A1-202ENST00000467182 PLS1Q14651 629 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 Q3C1V9 767 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 CCDC183Q5T5S1 534 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 RNF207Q6ZRF8 634 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.75□□□□□ -0.05
COL4A1-202ENST00000467182 CHST13Q8NET6 341 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 HAS1Q92839 578 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 PURBQ96QR8 312 aaKnown RBP14.75□□□□□ -0.05
COL4A1-202ENST00000467182 TAAR1Q96RJ0 339 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 MOV10L1Q9BXT6 1211 aaKnown RBP14.75□□□□□ -0.05
COL4A1-202ENST00000467182 GZF1Q9H116 711 aaPredicted RBP14.75□□□□□ -0.05
COL4A1-202ENST00000467182 ACAD9Q9H845 621 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 KCNMB3Q9NPA1 279 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 A1CFQ9NQ94 594 aaKnown RBP14.75□□□□□ -0.05
COL4A1-202ENST00000467182 DDX25Q9UHL0 483 aaKnown RBP14.75□□□□□ -0.05
COL4A1-202ENST00000467182 RABGAP1Q9Y3P9 1069 aa14.75□□□□□ -0.05
COL4A1-202ENST00000467182 LONP1P36776 959 aaKnown RBP14.74□□□□□ -0.05
COL4A1-202ENST00000467182 UBXN2AP68543 259 aa14.74□□□□□ -0.05
COL4A1-202ENST00000467182 CALCRLQ16602 461 aa14.74□□□□□ -0.05
COL4A1-202ENST00000467182 ZSCAN23Q3MJ62 389 aa14.74□□□□□ -0.05
COL4A1-202ENST00000467182 DTHD1Q6ZMT9 781 aa14.74□□□□□ -0.05
COL4A1-202ENST00000467182 CCDC73Q6ZRK6 1079 aa14.74□□□□□ -0.05
COL4A1-202ENST00000467182 IL31RAQ8NI17 732 aa14.74□□□□□ -0.05
COL4A1-202ENST00000467182 PAGR1Q9BTK6 254 aa14.74□□□□□ -0.05
COL4A1-202ENST00000467182 CLSTN2Q9H4D0 955 aa14.74□□□□□ -0.05
COL4A1-202ENST00000467182 DDX19AQ9NUU7 478 aaKnown RBP14.74□□□□□ -0.05
COL4A1-202ENST00000467182 CYP39A1Q9NYL5 469 aa14.74□□□□□ -0.05
COL4A1-202ENST00000467182 PNMA3Q9UL41 463 aa14.74□□□□□ -0.05
COL4A1-202ENST00000467182 LRRC37A2A6NM11 1700 aa14.73□□□□□ -0.05
COL4A1-202ENST00000467182 A0A087X0B3 334 aa14.73□□□□□ -0.05
COL4A1-202ENST00000467182 FXR2P51116 673 aaKnown RBP eCLIP14.73□□□□□ -0.05
COL4A1-202ENST00000467182 NSMFQ6X4W1 530 aa14.73□□□□□ -0.05
COL4A1-202ENST00000467182 CYP2W1Q8TAV3 490 aa14.73□□□□□ -0.05
COL4A1-202ENST00000467182 ETNPPLQ8TBG4 499 aa14.73□□□□□ -0.05
COL4A1-202ENST00000467182 GTF3C2Q8WUA4 911 aaPredicted RBP14.73□□□□□ -0.05
COL4A1-202ENST00000467182 SYMPKQ92797 1274 aaKnown RBP14.73□□□□□ -0.05
COL4A1-202ENST00000467182 EPSTI1Q96J88 318 aa14.73□□□□□ -0.05
COL4A1-202ENST00000467182 EHMT1Q9H9B1 1298 aa14.73□□□□□ -0.05
COL4A1-202ENST00000467182 ADGRA2Q96PE1 1338 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 MANSC4A6NHS7 340 aaPredicted RBP14.72□□□□□ -0.05
COL4A1-202ENST00000467182 TMEM88BA6NKF7 163 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 IGF2BP3O00425 579 aaKnown RBP eCLIP14.72□□□□□ -0.05
COL4A1-202ENST00000467182 ZNF202O95125 648 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 SLC25A27O95847 323 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 ZNF445P59923 1031 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 ERVK-9P63128 1117 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 ERVK-24P63145 666 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 MRPS9P82933 396 aaKnown RBP14.72□□□□□ -0.05
COL4A1-202ENST00000467182 PGM5Q15124 567 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 PCNX4Q63HM2 1172 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 RBM43Q6ZSC3 357 aaKnown RBP14.72□□□□□ -0.05
COL4A1-202ENST00000467182 IGSF22Q8N9C0 903 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 GJA10Q969M2 543 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 SYAP1Q96A49 352 aaPredicted RBP14.72□□□□□ -0.05
COL4A1-202ENST00000467182 HHIPL1Q96JK4 782 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 NUP62CLQ9H1M0 184 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 PXMP2Q9NR77 195 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 MORF4L1Q9UBU8 362 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 FBXO40Q9UH90 709 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 KCNH3Q9ULD8 1083 aa14.72□□□□□ -0.05
COL4A1-202ENST00000467182 ASTN1O14525 1302 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 PP2D1A8MPX8 630 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 MEIS1O00470 390 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms