RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 COPS5Q92905 334 aa7.3□□□□□ -1.24
PRPF40A-205ENST00000467114 SEC16BQ96JE7 1060 aa7.3□□□□□ -1.24
PRPF40A-205ENST00000467114 SPATA25Q9BR10 227 aa7.3□□□□□ -1.24
PRPF40A-205ENST00000467114 BCAS3Q9H6U6 928 aa7.3□□□□□ -1.24
PRPF40A-205ENST00000467114 GULP1Q9UBP9 304 aa7.3□□□□□ -1.24
PRPF40A-205ENST00000467114 SUGT1Q9Y2Z0 365 aa7.3□□□□□ -1.24
PRPF40A-205ENST00000467114 C7orf72A4D263 438 aa7.29□□□□□ -1.24
PRPF40A-205ENST00000467114 CACNB2Q08289 660 aaPredicted RBP7.29□□□□□ -1.24
PRPF40A-205ENST00000467114 EFEMP1Q12805 493 aa7.29□□□□□ -1.24
PRPF40A-205ENST00000467114 RTP5Q14D33 572 aa7.29□□□□□ -1.24
PRPF40A-205ENST00000467114 NT5DC1Q5TFE4 455 aa7.29□□□□□ -1.24
PRPF40A-205ENST00000467114 APEX2Q9UBZ4 518 aa7.29□□□□□ -1.24
PRPF40A-205ENST00000467114 EMC9Q9Y3B6 208 aa7.29□□□□□ -1.24
PRPF40A-205ENST00000467114 NPHS1O60500 1241 aa7.28□□□□□ -1.24
PRPF40A-205ENST00000467114 PLP2Q04941 152 aa7.28□□□□□ -1.24
PRPF40A-205ENST00000467114 VHLLQ6RSH7 139 aa7.28□□□□□ -1.24
PRPF40A-205ENST00000467114 CARFQ8N187 725 aa7.28□□□□□ -1.24
PRPF40A-205ENST00000467114 FAM169BQ8N8A8 192 aa7.28□□□□□ -1.24
PRPF40A-205ENST00000467114 SMARCC2Q8TAQ2 1214 aa7.28□□□□□ -1.24
PRPF40A-205ENST00000467114 MMP19Q99542 508 aa7.28□□□□□ -1.24
PRPF40A-205ENST00000467114 BDH2Q9BUT1 245 aa7.28□□□□□ -1.24
PRPF40A-205ENST00000467114 CNOT11Q9UKZ1 510 aaKnown RBP7.28□□□□□ -1.24
PRPF40A-205ENST00000467114 AKT3Q9Y243 479 aa7.28□□□□□ -1.24
PRPF40A-205ENST00000467114 ADRB1P08588 477 aa7.27□□□□□ -1.25
PRPF40A-205ENST00000467114 ZNF143P52747 638 aaPredicted RBP7.27□□□□□ -1.25
PRPF40A-205ENST00000467114 SPATS1Q496A3 300 aa7.27□□□□□ -1.25
PRPF40A-205ENST00000467114 CRACR2BQ8N4Y2 399 aaPredicted RBP7.27□□□□□ -1.25
PRPF40A-205ENST00000467114 PLEKHO2Q8TD55 490 aa7.27□□□□□ -1.25
PRPF40A-205ENST00000467114 USP33Q8TEY7 942 aa7.27□□□□□ -1.25
PRPF40A-205ENST00000467114 CPLX3Q8WVH0 158 aa7.27□□□□□ -1.25
PRPF40A-205ENST00000467114 NOX5Q96PH1 765 aa7.27□□□□□ -1.25
PRPF40A-205ENST00000467114 GMLQ99445 158 aa7.27□□□□□ -1.25
PRPF40A-205ENST00000467114 USP40Q9NVE5 1235 aa7.27□□□□□ -1.25
PRPF40A-205ENST00000467114 SPATA6Q9NWH7 488 aaPredicted RBP7.27□□□□□ -1.25
PRPF40A-205ENST00000467114 NOBOXO60393 691 aa7.26□□□□□ -1.25
PRPF40A-205ENST00000467114 UBXN11Q5T124 520 aa7.26□□□□□ -1.25
PRPF40A-205ENST00000467114 MBLAC2Q68D91 279 aa7.26□□□□□ -1.25
PRPF40A-205ENST00000467114 POMZP3Q6PJE2 187 aa7.26□□□□□ -1.25
PRPF40A-205ENST00000467114 LINC00482Q8N8I6 264 aa7.26□□□□□ -1.25
PRPF40A-205ENST00000467114 SLC43A3Q8NBI5 491 aa7.26□□□□□ -1.25
PRPF40A-205ENST00000467114 BVESQ8NE79 360 aa7.26□□□□□ -1.25
PRPF40A-205ENST00000467114 C8orf37Q96NL8 207 aa7.26□□□□□ -1.25
PRPF40A-205ENST00000467114 APBA2Q99767 749 aa7.26□□□□□ -1.25
PRPF40A-205ENST00000467114 CLEC1BQ9P126 229 aa7.26□□□□□ -1.25
PRPF40A-205ENST00000467114 STRIP2Q9ULQ0 834 aa7.26□□□□□ -1.25
PRPF40A-205ENST00000467114 KCNH1O95259 989 aa7.25□□□□□ -1.25
PRPF40A-205ENST00000467114 FUCA1P04066 466 aa7.25□□□□□ -1.25
PRPF40A-205ENST00000467114 NTRK1P04629 796 aa7.25□□□□□ -1.25
PRPF40A-205ENST00000467114 PLS3P13797 630 aa7.25□□□□□ -1.25
PRPF40A-205ENST00000467114 SCRN1Q12765 414 aa7.25□□□□□ -1.25
PRPF40A-205ENST00000467114 DPF3Q92784 378 aa7.25□□□□□ -1.25
PRPF40A-205ENST00000467114 GPRC5CQ9NQ84 441 aa7.25□□□□□ -1.25
PRPF40A-205ENST00000467114 NTMQ9P121 344 aa7.25□□□□□ -1.25
PRPF40A-205ENST00000467114 NAT2P11245 290 aa7.24□□□□□ -1.25
PRPF40A-205ENST00000467114 ATF4P18848 351 aaPredicted RBP7.24□□□□□ -1.25
PRPF40A-205ENST00000467114 GGNQ86UU5 652 aa7.24□□□□□ -1.25
PRPF40A-205ENST00000467114 FERMT3Q86UX7 667 aa7.24□□□□□ -1.25
PRPF40A-205ENST00000467114 DCP2Q8IU60 420 aaKnown RBP7.24□□□□□ -1.25
PRPF40A-205ENST00000467114 TRIM59Q8IWR1 403 aa7.24□□□□□ -1.25
PRPF40A-205ENST00000467114 BORCS6Q96GS4 357 aa7.24□□□□□ -1.25
PRPF40A-205ENST00000467114 MRGPRX3Q96LB0 322 aa7.24□□□□□ -1.25
PRPF40A-205ENST00000467114 LNPKQ9C0E8 428 aa7.24□□□□□ -1.25
PRPF40A-205ENST00000467114 CCSER2Q9H7U1 834 aa7.24□□□□□ -1.25
PRPF40A-205ENST00000467114 CYP26B1Q9NR63 512 aa7.24□□□□□ -1.25
PRPF40A-205ENST00000467114 SIT1Q9Y3P8 196 aa7.24□□□□□ -1.25
PRPF40A-205ENST00000467114 CYP2C8P10632 490 aa7.23□□□□□ -1.25
PRPF40A-205ENST00000467114 SARSP49591 514 aaKnown RBP7.23□□□□□ -1.25
PRPF40A-205ENST00000467114 NCAPHQ15003 741 aa7.23□□□□□ -1.25
PRPF40A-205ENST00000467114 ZBTB8AQ96BR9 441 aa7.23□□□□□ -1.25
PRPF40A-205ENST00000467114 DUSP10Q9Y6W6 482 aa7.23□□□□□ -1.25
PRPF40A-205ENST00000467114 NOP56O00567 594 aaKnown RBP7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 THBDP07204 575 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 C8BP07358 591 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 GJA9P57773 515 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 ZC3H6P61129 1189 aaKnown RBP7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 CYP4F3Q08477 520 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 INF2Q27J81 1249 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 GTF2IRD2BQ6EKJ0 949 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 TTLL7Q6ZT98 887 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 GTF2IRD2Q86UP8 949 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 ZNF761Q86XN6 746 aaPredicted RBP7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 MIB1Q86YT6 1006 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 DDX11Q96FC9 970 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 GORASP1Q9BQQ3 440 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 NKX2-4Q9H2Z4 354 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 PCDH18Q9HCL0 1135 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 MARCH2Q9P0N8 246 aa7.22□□□□□ -1.25
PRPF40A-205ENST00000467114 SGSM2O43147 1006 aa7.21□□□□□ -1.26
PRPF40A-205ENST00000467114 FGRP09769 529 aa7.21□□□□□ -1.26
PRPF40A-205ENST00000467114 ETV3LQ6ZN32 361 aa7.21□□□□□ -1.26
PRPF40A-205ENST00000467114 NPLOC4Q8TAT6 608 aa7.21□□□□□ -1.26
PRPF40A-205ENST00000467114 FRS2Q8WU20 508 aa7.21□□□□□ -1.26
PRPF40A-205ENST00000467114 AP5M1Q9H0R1 490 aa7.21□□□□□ -1.26
PRPF40A-205ENST00000467114 INPP5FQ9Y2H2 1132 aa7.21□□□□□ -1.26
PRPF40A-205ENST00000467114 K7ESM1 405 aa7.2□□□□□ -1.26
PRPF40A-205ENST00000467114 CNR2P34972 360 aa7.2□□□□□ -1.26
PRPF40A-205ENST00000467114 SLC6A11P48066 632 aa7.2□□□□□ -1.26
PRPF40A-205ENST00000467114 SMAD4Q13485 552 aaKnown RBP7.2□□□□□ -1.26
PRPF40A-205ENST00000467114 IQCEQ6IPM2 695 aa7.2□□□□□ -1.26
PRPF40A-205ENST00000467114 HHIPL2Q6UWX4 724 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms