RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 CLEC1BQ9P126 229 aa5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 AKT3Q9Y243 479 aa5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 SUGT1Q9Y2Z0 365 aa5.16□□□□□ -1.58
GTF3C3-209ENST00000466862 A0A1W2PQJ5 194 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 B2RBV5 119 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 KCNH1O95259 989 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 C8BP07358 591 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 PLS3P13797 630 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 INF2Q27J81 1249 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 GTF2IRD2BQ6EKJ0 949 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 GTF2IRD2Q86UP8 949 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 CABP7Q86V35 215 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 NLRP10Q86W26 655 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 NLGN1Q8N2Q7 840 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 SMARCC2Q8TAQ2 1214 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 FRS2Q8WU20 508 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 PEX11GQ96HA9 241 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 INPP5FQ9Y2H2 1132 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 SIT1Q9Y3P8 196 aa5.15□□□□□ -1.59
GTF3C3-209ENST00000466862 ARNTLO00327 626 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 PRICKLE3O43900 615 aaPredicted RBP5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 NPHS1O60500 1241 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 CAPNS1P04632 268 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 CACNB2Q08289 660 aaPredicted RBP5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 EFEMP1Q12805 493 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 SLC9A5Q14940 896 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 NCAPHQ15003 741 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 TESK1Q15569 626 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 MRM1Q6IN84 353 aaKnown RBP5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 MIB1Q86YT6 1006 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 CCDC103Q8IW40 242 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 ZDHHC14Q8IZN3 488 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 CRACR2BQ8N4Y2 399 aaPredicted RBP5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 ANAPC16Q96DE5 110 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 SPATA25Q9BR10 227 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 CCSER2Q9H7U1 834 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 SPATA6Q9NWH7 488 aaPredicted RBP5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 NUDT5Q9UKK9 219 aa5.14□□□□□ -1.59
GTF3C3-209ENST00000466862 SMAD7O15105 426 aaKnown RBP5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 ZBTB7AO95365 584 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 NTRK1P04629 796 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 SCG5P05408 212 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 KCNC1P48547 511 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 RTP5Q14D33 572 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 ZFYVE27Q5T4F4 411 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 POMZP3Q6PJE2 187 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 C6orf15Q6UXA7 325 aaPredicted RBP5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 ZNF227Q86WZ6 799 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 DCP2Q8IU60 420 aaKnown RBP5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 LINC00482Q8N8I6 264 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 CPLX3Q8WVH0 158 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 GPRC5CQ9NQ84 441 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 CYP26B1Q9NR63 512 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 FBXL7Q9UJT9 491 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 DBR1Q9UK59 544 aaKnown RBP5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 FAN1Q9Y2M0 1017 aa5.13□□□□□ -1.59
GTF3C3-209ENST00000466862 FUCA1P04066 466 aa5.12□□□□□ -1.59
GTF3C3-209ENST00000466862 FGRP09769 529 aa5.12□□□□□ -1.59
GTF3C3-209ENST00000466862 NAT2P11245 290 aa5.12□□□□□ -1.59
GTF3C3-209ENST00000466862 SLC6A11P48066 632 aa5.12□□□□□ -1.59
GTF3C3-209ENST00000466862 RBM10P98175 930 aaKnown RBP5.12□□□□□ -1.59
GTF3C3-209ENST00000466862 HOMEZQ8IX15 550 aa5.12□□□□□ -1.59
GTF3C3-209ENST00000466862 CARFQ8N187 725 aa5.12□□□□□ -1.59
GTF3C3-209ENST00000466862 KREMEN2Q8NCW0 462 aa5.12□□□□□ -1.59
GTF3C3-209ENST00000466862 BTN2A2Q8WVV5 523 aa5.12□□□□□ -1.59
GTF3C3-209ENST00000466862 C1orf159Q96HA4 380 aa5.12□□□□□ -1.59
GTF3C3-209ENST00000466862 APBA2Q99767 749 aa5.12□□□□□ -1.59
GTF3C3-209ENST00000466862 MARCH2Q9P0N8 246 aa5.12□□□□□ -1.59
GTF3C3-209ENST00000466862 TMEFF2Q9UIK5 374 aaPredicted RBP5.12□□□□□ -1.59
GTF3C3-209ENST00000466862 SGSM2O43147 1006 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 SUSD5O60279 629 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 NOBOXO60393 691 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 ITGAVP06756 1048 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 CELA3BP08861 270 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 FPR2P25090 351 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 E4F1Q66K89 784 aaPredicted RBP5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 RIOX2Q8IUF8 465 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 TEX2Q8IWB9 1127 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 MICAL1Q8TDZ2 1067 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 SYT3Q9BQG1 590 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 GORASP1Q9BQQ3 440 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 TINF2Q9BSI4 451 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 ACTR10Q9NZ32 417 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 DUSP10Q9Y6W6 482 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 X6R8D5 127 aa5.11□□□□□ -1.59
GTF3C3-209ENST00000466862 THBS2P35442 1172 aa5.1□□□□□ -1.59
GTF3C3-209ENST00000466862 ACBD5Q5T8D3 534 aaPredicted RBP5.1□□□□□ -1.59
GTF3C3-209ENST00000466862 NT5DC1Q5TFE4 455 aa5.1□□□□□ -1.59
GTF3C3-209ENST00000466862 GGNQ86UU5 652 aa5.1□□□□□ -1.59
GTF3C3-209ENST00000466862 ZNF761Q86XN6 746 aaPredicted RBP5.1□□□□□ -1.59
GTF3C3-209ENST00000466862 FAM178BQ8IXR5 827 aa5.1□□□□□ -1.59
GTF3C3-209ENST00000466862 DDX11Q96FC9 970 aa5.1□□□□□ -1.59
GTF3C3-209ENST00000466862 BDH2Q9BUT1 245 aa5.1□□□□□ -1.59
GTF3C3-209ENST00000466862 LNPKQ9C0E8 428 aa5.1□□□□□ -1.59
GTF3C3-209ENST00000466862 PRKAG3Q9UGI9 489 aa5.1□□□□□ -1.59
GTF3C3-209ENST00000466862 CYP2C8P10632 490 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 GFRA1P56159 465 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 KCNAB2Q13303 367 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 SF1Q15637 639 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms