RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 PXMP2Q9NR77 195 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 ZHX1Q9UKY1 873 aaPredicted RBP10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 GNEQ9Y223 722 aaKnown RBP10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 Q9Y3F1 56 aa10.94□□□□□ -0.66
SDCCAG3-208ENST00000466579 MEIS2O14770 477 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 PRPF3O43395 683 aaKnown RBP10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 CFBP00751 764 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 GJA9P57773 515 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 LRRC41Q15345 812 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 PFKFB3Q16875 520 aaPredicted RBP10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 WWC2Q6AWC2 1192 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 CCSAPQ6IQ19 270 aaPredicted RBP10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 NECAB2Q7Z6G3 386 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 CCDC82Q8N4S0 544 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 ARRDC4Q8NCT1 418 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 PIBF1Q8WXW3 757 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 PAWRQ96IZ0 340 aaKnown RBP10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 RMDN3Q96TC7 470 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 KIF2CQ99661 725 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 PDCD2LQ9BRP1 358 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 XPNPEP3Q9NQH7 507 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 RBM27Q9P2N5 1060 aaKnown RBP10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 GTF3C3Q9Y5Q9 886 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 DDX49Q9Y6V7 483 aaKnown RBP10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 V9GY48 417 aaPredicted RBP10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 DNAH12Q6ZR08 3092 aa10.93□□□□□ -0.66
SDCCAG3-208ENST00000466579 SYNRGQ9UMZ2 1314 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 hCG_1642624A0A1W2PR95 340 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 STXBP3O00186 592 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 CTAGE5O15320 804 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 PFKFB2O60825 505 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 NR3C2P08235 984 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 SMPD1P17405 629 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 HOXA13P31271 388 aaPredicted RBP10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 TNFAIP2Q03169 654 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 PDE4DQ08499 809 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 ANKRD1Q15327 319 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 PKN1Q16512 942 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 DUSP28Q4G0W2 176 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 ANO1Q5XXA6 986 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 VSIG10LQ86VR7 867 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 FBXO16Q8IX29 292 aaPredicted RBP10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 LENG1Q96BZ8 264 aaPredicted RBP10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 TSEN34Q9BSV6 310 aaKnown RBP10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 RNF26Q9BY78 433 aaPredicted RBP10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 C11orf49Q9H6J7 331 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 PDGFCQ9NRA1 345 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 BARHL2Q9NY43 387 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 TPCN1Q9ULQ1 816 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 PHF24Q9UPV7 400 aa10.92□□□□□ -0.66
SDCCAG3-208ENST00000466579 ESYT2A0FGR8 921 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 NKRFO15226 690 aaKnown RBP eCLIP10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 EIF3JO75822 258 aaKnown RBP10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 SCG2P13521 617 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 ADCYAP1R1P41586 468 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 AK2P54819 239 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 SNX17Q15036 470 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 PGM5Q15124 567 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 STXBP2Q15833 593 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 ARHGEF16Q5VV41 709 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 CCDC62Q6P9F0 684 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 RNF180Q86T96 592 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 FAM177A1Q8N128 213 aaPredicted RBP10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 IL27Q8NEV9 243 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 SCFD2Q8WU76 684 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 GPKOWQ92917 476 aaPredicted RBP eCLIP10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 HTATIP2Q9BUP3 242 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 C22orf23Q9BZE7 217 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 GLT8D2Q9H1C3 349 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 PSTPIP2Q9H939 334 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 NCOA5Q9HCD5 579 aaKnown RBP10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 RIC8AQ9NPQ8 531 aa10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 NAP1L2Q9ULW6 460 aaPredicted RBP10.91□□□□□ -0.66
SDCCAG3-208ENST00000466579 MOXD2PA6NHM9 499 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 STAM2O75886 525 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 RGS20O76081 388 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 PGK1P00558 417 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 EIF2AK2P19525 551 aaKnown RBP10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 CLK2P49760 499 aaKnown RBP10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 NEK4P51957 841 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 CCT2P78371 535 aaKnown RBP10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 GJC2Q5T442 439 aaPredicted RBP10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 C1orf53Q5VUE5 145 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 XRRA1Q6P2D8 792 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 USP17L6PQ6QN14 398 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 EEPD1Q7L9B9 569 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 HEATR3Q7Z4Q2 680 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 TLK2Q86UE8 772 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 IL31RAQ8NI17 732 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 CUL5Q93034 780 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 LARP6Q9BRS8 491 aaKnown RBP10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 WDR11Q9BZH6 1224 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 ZMYND12Q9H0C1 365 aa10.9□□□□□ -0.66
SDCCAG3-208ENST00000466579 MYADML2A6NDP7 307 aa10.89□□□□□ -0.67
SDCCAG3-208ENST00000466579 KBTBD13C9JR72 458 aa10.89□□□□□ -0.67
SDCCAG3-208ENST00000466579 ARIH2O95376 493 aa10.89□□□□□ -0.67
SDCCAG3-208ENST00000466579 NAPAP54920 295 aa10.89□□□□□ -0.67
SDCCAG3-208ENST00000466579 MRPS9P82933 396 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms