RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 BNIP3Q12983 259 aa6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 DHCR24Q15392 516 aa6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 INF2Q27J81 1249 aa6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 ZPBP2Q6X784 338 aa6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 JAMLQ86YT9 394 aa6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 SPPL2CQ8IUH8 684 aa6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 AFAP1L2Q8N4X5 818 aa6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 PCDH19Q8TAB3 1148 aa6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 LEO1Q8WVC0 666 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 MAP6Q96JE9 813 aa6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 CARS2Q9HA77 564 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 PCDHA2Q9Y5H9 948 aa6.1□□□□□ -1.43
CDC42BPA-211ENST00000466538 FADS2P1A8MWK0 482 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 H7BY64 318 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 FURINP09958 794 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 POU3F3P20264 500 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 PMLP29590 882 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 CORO7P57737 925 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 ZP2Q05996 745 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 LAPTM5Q13571 262 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 ZNF460Q14592 562 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 PCBP1Q15365 356 aaKnown RBP eCLIP6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 FAM47CQ5HY64 1035 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 WWC2Q6AWC2 1192 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 C16orf59Q7L2K0 433 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 DDX42Q86XP3 938 aaKnown RBP eCLIP6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 DTX1Q86Y01 620 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 ZC3H7AQ8IWR0 971 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 RPUSD2Q8IZ73 545 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 ALPK1Q96QP1 1244 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 G6PC3Q9BUM1 346 aa6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 CELF4Q9BZC1 486 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 METTL14Q9HCE5 456 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-211ENST00000466538 WTIPA6NIX2 430 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 ALG1L2C9J202 215 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 SOD2P04179 222 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 ZGLP1P0C6A0 271 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 CD8BP10966 210 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 CDK11BP21127 795 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 SCNN1BP51168 640 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 CHRNEQ04844 493 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 MBLAC2Q68D91 279 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 VSIG10LQ86VR7 867 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 UBR7Q8N806 425 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 ANKS4BQ8N8V4 417 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 FBXW5Q969U6 566 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 ASIC4Q96FT7 647 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 HHIPL1Q96JK4 782 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 ADAMTS10Q9H324 1103 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 DDX56Q9NY93 547 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 SAMD15Q9P1V8 674 aa6.08□□□□□ -1.44
CDC42BPA-211ENST00000466538 ZEB2O60315 1214 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 BRINP1O60477 761 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 EYA4O95677 639 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 CKMP06732 381 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 BCL6P41182 706 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 CEBPAP49715 358 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 ARHGAP44Q17R89 818 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 PIK3R6Q5UE93 754 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 ABHD17CQ6PCB6 329 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 SLC23A3Q6PIS1 610 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 CEP68Q76N32 757 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 SPRED2Q7Z698 418 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 Q8N1Y9 231 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 OXR1Q8N573 874 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 IGSF22Q8N9C0 903 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 PRPF38AQ8NAV1 312 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 OR2W6PQ8NHA6 318 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 ATL2Q8NHH9 583 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 DPF3Q92784 378 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 TMEM169Q96HH4 297 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 CHAMP1Q96JM3 812 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 CDIP1Q9H305 208 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 HOMER2Q9NSB8 354 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 CCDC39Q9UFE4 941 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 TMEM59LQ9UK28 342 aa6.07□□□□□ -1.44
CDC42BPA-211ENST00000466538 KPNA6O60684 536 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 RAB11FIP3O75154 756 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 F2P00734 622 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 SRGAP2CP0DJJ0 459 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 GRK2P25098 689 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 GRK3P35626 688 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 CD97P48960 835 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 RTP1P59025 263 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 ST5P78524 1137 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 LACTBP83111 547 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 NR0B2Q15466 257 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 SLC14A2Q15849 920 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 PKN3Q6P5Z2 889 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 GALNT18Q6P9A2 607 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 SLCO6A1Q86UG4 719 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 PDZD8Q8NEN9 1154 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 IPPKQ9H8X2 491 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 CABP5Q9NP86 173 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 CLDND1Q9NY35 253 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 SLAMF8Q9P0V8 285 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 X6R8D5 127 aa6.06□□□□□ -1.44
CDC42BPA-211ENST00000466538 A0A1W2PQ27 194 aa6.05□□□□□ -1.44
CDC42BPA-211ENST00000466538 A0A1W2PQ64 194 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms