RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 SP9P0CG40 484 aa9.53□□□□□ -0.88
APP-214ENST00000466453 PTPN11Q06124 597 aaPredicted RBP9.53□□□□□ -0.88
APP-214ENST00000466453 CAMK1Q14012 370 aa9.53□□□□□ -0.88
APP-214ENST00000466453 ATP2B3Q16720 1220 aa9.53□□□□□ -0.88
APP-214ENST00000466453 ADGRD2Q7Z7M1 963 aa9.53□□□□□ -0.88
APP-214ENST00000466453 REPS2Q8NFH8 660 aa9.53□□□□□ -0.88
APP-214ENST00000466453 NETO1Q8TDF5 533 aa9.53□□□□□ -0.88
APP-214ENST00000466453 TGFBRAP1Q8WUH2 860 aa9.53□□□□□ -0.88
APP-214ENST00000466453 C9orf78Q9NZ63 289 aaPredicted RBP9.53□□□□□ -0.88
APP-214ENST00000466453 ADAMTS8Q9UP79 889 aa9.53□□□□□ -0.88
APP-214ENST00000466453 NOD1Q9Y239 953 aa9.53□□□□□ -0.88
APP-214ENST00000466453 VWA5AO00534 786 aa9.52□□□□□ -0.89
APP-214ENST00000466453 SP100P23497 879 aaPredicted RBP9.52□□□□□ -0.89
APP-214ENST00000466453 BMPR1AP36894 532 aa9.52□□□□□ -0.89
APP-214ENST00000466453 CERKLQ49MI3 558 aaPredicted RBP9.52□□□□□ -0.89
APP-214ENST00000466453 N4BP2L1Q5TBK1 243 aaPredicted RBP9.52□□□□□ -0.89
APP-214ENST00000466453 CCDC102BQ68D86 513 aa9.52□□□□□ -0.89
APP-214ENST00000466453 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.52□□□□□ -0.89
APP-214ENST00000466453 CCDC146Q8IYE0 955 aa9.52□□□□□ -0.89
APP-214ENST00000466453 ANKRD44Q8N8A2 993 aa9.52□□□□□ -0.89
APP-214ENST00000466453 SECISBP2LQ93073 1101 aaKnown RBP9.52□□□□□ -0.89
APP-214ENST00000466453 BORCS6Q96GS4 357 aa9.52□□□□□ -0.89
APP-214ENST00000466453 CTAGE1Q96RT6 745 aa9.52□□□□□ -0.89
APP-214ENST00000466453 MTG1Q9BT17 334 aaPredicted RBP9.52□□□□□ -0.89
APP-214ENST00000466453 BICC1Q9H694 974 aaKnown RBP9.52□□□□□ -0.89
APP-214ENST00000466453 CABP5Q9NP86 173 aa9.52□□□□□ -0.89
APP-214ENST00000466453 ANKFY1Q9P2R3 1169 aa9.52□□□□□ -0.89
APP-214ENST00000466453 USP18Q9UMW8 372 aa9.52□□□□□ -0.89
APP-214ENST00000466453 RWDD3Q9Y3V2 267 aa9.52□□□□□ -0.89
APP-214ENST00000466453 NR2E1Q9Y466 385 aa9.52□□□□□ -0.89
APP-214ENST00000466453 LAMA1P25391 3075 aa9.51□□□□□ -0.89
APP-214ENST00000466453 TMEM8BA6NDV4 472 aa9.51□□□□□ -0.89
APP-214ENST00000466453 EYA2O00167 538 aa9.51□□□□□ -0.89
APP-214ENST00000466453 SPTLC1O15269 473 aa9.51□□□□□ -0.89
APP-214ENST00000466453 LGR5O75473 907 aa9.51□□□□□ -0.89
APP-214ENST00000466453 CSPG5O95196 566 aa9.51□□□□□ -0.89
APP-214ENST00000466453 PLCG2P16885 1265 aa9.51□□□□□ -0.89
APP-214ENST00000466453 NRIP1P48552 1158 aa9.51□□□□□ -0.89
APP-214ENST00000466453 SEPT2Q15019 361 aa9.51□□□□□ -0.89
APP-214ENST00000466453 FAM133AQ8N9E0 248 aa9.51□□□□□ -0.89
APP-214ENST00000466453 DDX1Q92499 740 aaKnown RBP9.51□□□□□ -0.89
APP-214ENST00000466453 DHX38Q92620 1227 aaKnown RBP9.51□□□□□ -0.89
APP-214ENST00000466453 TOP1MTQ969P6 601 aa9.51□□□□□ -0.89
APP-214ENST00000466453 TEX13BQ9BXU2 312 aa9.51□□□□□ -0.89
APP-214ENST00000466453 EHD4Q9H223 541 aa9.51□□□□□ -0.89
APP-214ENST00000466453 SAP30BPQ9UHR5 308 aaKnown RBP9.51□□□□□ -0.89
APP-214ENST00000466453 SERPINB13Q9UIV8 391 aa9.51□□□□□ -0.89
APP-214ENST00000466453 ACACAQ13085 2346 aa9.51□□□□□ -0.89
APP-214ENST00000466453 NAV1Q8NEY1 1877 aa9.51□□□□□ -0.89
APP-214ENST00000466453 F6X3S4 739 aa9.5□□□□□ -0.89
APP-214ENST00000466453 WDR46O15213 610 aaKnown RBP9.5□□□□□ -0.89
APP-214ENST00000466453 SPICE1Q8N0Z3 855 aa9.5□□□□□ -0.89
APP-214ENST00000466453 ATP8B4Q8TF62 1192 aa9.5□□□□□ -0.89
APP-214ENST00000466453 PPP1R13LQ8WUF5 828 aa9.5□□□□□ -0.89
APP-214ENST00000466453 HNRNPABQ99729 332 aaKnown RBP9.5□□□□□ -0.89
APP-214ENST00000466453 ERVK-5Q9HDB9 667 aa9.5□□□□□ -0.89
APP-214ENST00000466453 PARD6AQ9NPB6 346 aa9.5□□□□□ -0.89
APP-214ENST00000466453 AATFQ9NY61 560 aaKnown RBP eCLIP9.5□□□□□ -0.89
APP-214ENST00000466453 ADAMTS20P59510 1910 aa9.5□□□□□ -0.89
APP-214ENST00000466453 C2CD4DB7Z1M9 353 aa9.49□□□□□ -0.89
APP-214ENST00000466453 BAG3O95817 575 aa9.49□□□□□ -0.89
APP-214ENST00000466453 ASGR2P07307 311 aa9.49□□□□□ -0.89
APP-214ENST00000466453 CKBP12277 381 aa9.49□□□□□ -0.89
APP-214ENST00000466453 KCNA4P22459 653 aa9.49□□□□□ -0.89
APP-214ENST00000466453 PPP4CP60510 307 aa9.49□□□□□ -0.89
APP-214ENST00000466453 CALD1Q05682 793 aaKnown RBP9.49□□□□□ -0.89
APP-214ENST00000466453 MBTPS1Q14703 1052 aa9.49□□□□□ -0.89
APP-214ENST00000466453 PTGISQ16647 500 aa9.49□□□□□ -0.89
APP-214ENST00000466453 TMEM63BQ5T3F8 832 aa9.49□□□□□ -0.89
APP-214ENST00000466453 IQSEC1Q6DN90 963 aa9.49□□□□□ -0.89
APP-214ENST00000466453 ATG9AQ7Z3C6 839 aa9.49□□□□□ -0.89
APP-214ENST00000466453 FIBCD1Q8N539 461 aa9.49□□□□□ -0.89
APP-214ENST00000466453 ADAM32Q8TC27 787 aa9.49□□□□□ -0.89
APP-214ENST00000466453 CLP1Q92989 425 aaKnown RBP9.49□□□□□ -0.89
APP-214ENST00000466453 RUNDC1Q96C34 613 aa9.49□□□□□ -0.89
APP-214ENST00000466453 NOL10Q9BSC4 688 aaKnown RBP9.49□□□□□ -0.89
APP-214ENST00000466453 TMEM121BQ9BXQ6 578 aaPredicted RBP9.49□□□□□ -0.89
APP-214ENST00000466453 S1PR5Q9H228 398 aa9.49□□□□□ -0.89
APP-214ENST00000466453 TSHZ2Q9NRE2 1034 aa9.49□□□□□ -0.89
APP-214ENST00000466453 FBXO28Q9NVF7 368 aa9.49□□□□□ -0.89
APP-214ENST00000466453 RNF216Q9NWF9 866 aaPredicted RBP9.49□□□□□ -0.89
APP-214ENST00000466453 PPP1R9AQ9ULJ8 1098 aa9.49□□□□□ -0.89
APP-214ENST00000466453 SMG5Q9UPR3 1016 aaKnown RBP9.49□□□□□ -0.89
APP-214ENST00000466453 RIPK3Q9Y572 518 aa9.49□□□□□ -0.89
APP-214ENST00000466453 COL12A1Q99715 3063 aa9.48□□□□□ -0.89
APP-214ENST00000466453 RALGAPA1Q6GYQ0 2036 aa9.48□□□□□ -0.89
APP-214ENST00000466453 ALDH1L1O75891 902 aa9.48□□□□□ -0.89
APP-214ENST00000466453 MYL3P08590 195 aa9.48□□□□□ -0.89
APP-214ENST00000466453 NBPF7P0C2Y1 421 aaPredicted RBP9.48□□□□□ -0.89
APP-214ENST00000466453 DNAJB1P25685 340 aa9.48□□□□□ -0.89
APP-214ENST00000466453 ADORA1P30542 326 aa9.48□□□□□ -0.89
APP-214ENST00000466453 SHMT1P34896 483 aa9.48□□□□□ -0.89
APP-214ENST00000466453 RBM25P49756 843 aaKnown RBP9.48□□□□□ -0.89
APP-214ENST00000466453 CPT1AP50416 773 aa9.48□□□□□ -0.89
APP-214ENST00000466453 SNRNP48Q6IEG0 339 aaKnown RBP9.48□□□□□ -0.89
APP-214ENST00000466453 TAPT1Q6NXT6 567 aa9.48□□□□□ -0.89
APP-214ENST00000466453 TRAF7Q6Q0C0 670 aa9.48□□□□□ -0.89
APP-214ENST00000466453 C1orf210Q8IVY1 113 aa9.48□□□□□ -0.89
APP-214ENST00000466453 VN1R2Q8NFZ6 395 aa9.48□□□□□ -0.89
APP-214ENST00000466453 NEK1Q96PY6 1258 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms