RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 AKR1A1P14550 325 aa23.41■■□□□ 1.34
SKA3-205ENST00000465471 UBE2Q1Q7Z7E8 422 aa23.41■■□□□ 1.34
SKA3-205ENST00000465471 IWS1Q96ST2 819 aa23.41■■□□□ 1.34
SKA3-205ENST00000465471 MKI67P46013 3256 aaKnown RBP23.41■■□□□ 1.34
SKA3-205ENST00000465471 MNX1P50219 401 aaPredicted RBP23.4■■□□□ 1.34
SKA3-205ENST00000465471 TAPT1Q6NXT6 567 aa23.4■■□□□ 1.34
SKA3-205ENST00000465471 ANKLE1Q8NAG6 615 aa23.4■■□□□ 1.34
SKA3-205ENST00000465471 IL27Q8NEV9 243 aa23.4■■□□□ 1.34
SKA3-205ENST00000465471 GTF3C6Q969F1 213 aa23.4■■□□□ 1.34
SKA3-205ENST00000465471 MPHOSPH6Q99547 160 aaKnown RBP23.4■■□□□ 1.34
SKA3-205ENST00000465471 SLC26A6Q9BXS9 759 aa23.4■■□□□ 1.34
SKA3-205ENST00000465471 PSTPIP2Q9H939 334 aa23.4■■□□□ 1.34
SKA3-205ENST00000465471 B4DLN1 442 aa23.39■■□□□ 1.33
SKA3-205ENST00000465471 CPLX1O14810 134 aa23.39■■□□□ 1.33
SKA3-205ENST00000465471 ADCY6O43306 1168 aa23.39■■□□□ 1.33
SKA3-205ENST00000465471 MRPL12P52815 198 aaKnown RBP23.39■■□□□ 1.33
SKA3-205ENST00000465471 NAPAP54920 295 aa23.39■■□□□ 1.33
SKA3-205ENST00000465471 CCDC144BQ3MJ40 725 aa23.39■■□□□ 1.33
SKA3-205ENST00000465471 CPLX2Q6PUV4 134 aaKnown RBP23.39■■□□□ 1.33
SKA3-205ENST00000465471 USP17L6PQ6QN14 398 aa23.39■■□□□ 1.33
SKA3-205ENST00000465471 NOL8Q76FK4 1167 aaKnown RBP23.39■■□□□ 1.33
SKA3-205ENST00000465471 FBXO16Q8IX29 292 aaPredicted RBP23.39■■□□□ 1.33
SKA3-205ENST00000465471 PDCD2LQ9BRP1 358 aa23.39■■□□□ 1.33
SKA3-205ENST00000465471 FAM184BQ9ULE4 1060 aa23.39■■□□□ 1.33
SKA3-205ENST00000465471 KIAA1217Q5T5P2 1943 aa23.39■■□□□ 1.33
SKA3-205ENST00000465471 RBM47A0AV96 593 aaKnown RBP23.38■■□□□ 1.33
SKA3-205ENST00000465471 ESYT2A0FGR8 921 aa23.38■■□□□ 1.33
SKA3-205ENST00000465471 PPFIA3O75145 1194 aa23.38■■□□□ 1.33
SKA3-205ENST00000465471 CTDNEP1O95476 244 aa23.38■■□□□ 1.33
SKA3-205ENST00000465471 TFRCP02786 760 aaKnown RBP23.38■■□□□ 1.33
SKA3-205ENST00000465471 EIF2AK2P19525 551 aaKnown RBP23.38■■□□□ 1.33
SKA3-205ENST00000465471 PDE4DQ08499 809 aa23.38■■□□□ 1.33
SKA3-205ENST00000465471 ST3GAL1Q11201 340 aa23.38■■□□□ 1.33
SKA3-205ENST00000465471 ARHGEF16Q5VV41 709 aa23.38■■□□□ 1.33
SKA3-205ENST00000465471 CUL5Q93034 780 aa23.38■■□□□ 1.33
SKA3-205ENST00000465471 RIC8AQ9NPQ8 531 aa23.38■■□□□ 1.33
SKA3-205ENST00000465471 LIMCH1Q9UPQ0 1083 aa23.38■■□□□ 1.33
SKA3-205ENST00000465471 STK36Q9NRP7 1315 aa23.37■■□□□ 1.33
SKA3-205ENST00000465471 CDKL5O76039 1030 aa23.37■■□□□ 1.33
SKA3-205ENST00000465471 AKAP17AQ02040 695 aaKnown RBP23.37■■□□□ 1.33
SKA3-205ENST00000465471 SSRP1Q08945 709 aaKnown RBP23.37■■□□□ 1.33
SKA3-205ENST00000465471 PGM5Q15124 567 aa23.37■■□□□ 1.33
SKA3-205ENST00000465471 EEPD1Q7L9B9 569 aa23.37■■□□□ 1.33
SKA3-205ENST00000465471 FCHSD1Q86WN1 690 aa23.37■■□□□ 1.33
SKA3-205ENST00000465471 TRIM22Q8IYM9 498 aa23.37■■□□□ 1.33
SKA3-205ENST00000465471 SMARCC2Q8TAQ2 1214 aa23.37■■□□□ 1.33
SKA3-205ENST00000465471 PDGFCQ9NRA1 345 aa23.37■■□□□ 1.33
SKA3-205ENST00000465471 DEXIO95424 95 aa23.36■■□□□ 1.33
SKA3-205ENST00000465471 NR3C2P08235 984 aa23.36■■□□□ 1.33
SKA3-205ENST00000465471 RARBP10826 455 aa23.36■■□□□ 1.33
SKA3-205ENST00000465471 ANO1Q5XXA6 986 aa23.36■■□□□ 1.33
SKA3-205ENST00000465471 NECAB1Q8N987 351 aa23.36■■□□□ 1.33
SKA3-205ENST00000465471 IL31RAQ8NI17 732 aa23.36■■□□□ 1.33
SKA3-205ENST00000465471 LENG1Q96BZ8 264 aaPredicted RBP23.36■■□□□ 1.33
SKA3-205ENST00000465471 ZMYND12Q9H0C1 365 aa23.36■■□□□ 1.33
SKA3-205ENST00000465471 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.35■■□□□ 1.33
SKA3-205ENST00000465471 SMCO2A6NFE2 343 aa23.35■■□□□ 1.33
SKA3-205ENST00000465471 DUSP11O75319 330 aaKnown RBP23.35■■□□□ 1.33
SKA3-205ENST00000465471 ADCYAP1R1P41586 468 aa23.35■■□□□ 1.33
SKA3-205ENST00000465471 CLK2P49760 499 aaKnown RBP23.35■■□□□ 1.33
SKA3-205ENST00000465471 ADCY7P51828 1080 aa23.35■■□□□ 1.33
SKA3-205ENST00000465471 STXBP2Q15833 593 aa23.35■■□□□ 1.33
SKA3-205ENST00000465471 UBE2SQ16763 222 aa23.35■■□□□ 1.33
SKA3-205ENST00000465471 VSIG10LQ86VR7 867 aa23.35■■□□□ 1.33
SKA3-205ENST00000465471 GLT8D2Q9H1C3 349 aa23.35■■□□□ 1.33
SKA3-205ENST00000465471 SH3GLB2Q9NR46 395 aa23.35■■□□□ 1.33
SKA3-205ENST00000465471 GNEQ9Y223 722 aaKnown RBP23.35■■□□□ 1.33
SKA3-205ENST00000465471 ADAMTS4O75173 837 aa23.34■■□□□ 1.33
SKA3-205ENST00000465471 FARP2O94887 1054 aaPredicted RBP23.34■■□□□ 1.33
SKA3-205ENST00000465471 SMPD1P17405 629 aa23.34■■□□□ 1.33
SKA3-205ENST00000465471 NKX3-2P78367 333 aa23.34■■□□□ 1.33
SKA3-205ENST00000465471 IQSEC1Q6DN90 963 aa23.34■■□□□ 1.33
SKA3-205ENST00000465471 CCDC12Q8WUD4 166 aaPredicted RBP23.34■■□□□ 1.33
SKA3-205ENST00000465471 UPF3AQ9H1J1 476 aaKnown RBP23.34■■□□□ 1.33
SKA3-205ENST00000465471 XPNPEP3Q9NQH7 507 aa23.34■■□□□ 1.33
SKA3-205ENST00000465471 SYNRGQ9UMZ2 1314 aa23.33■■□□□ 1.33
SKA3-205ENST00000465471 EIF3JO75822 258 aaKnown RBP23.33■■□□□ 1.33
SKA3-205ENST00000465471 TNFAIP2Q03169 654 aa23.33■■□□□ 1.33
SKA3-205ENST00000465471 FAM177A1Q8N128 213 aaPredicted RBP23.33■■□□□ 1.33
SKA3-205ENST00000465471 NSUN7Q8NE18 718 aaKnown RBP23.33■■□□□ 1.33
SKA3-205ENST00000465471 CCDC148Q8NFR7 591 aa23.33■■□□□ 1.33
SKA3-205ENST00000465471 DIS3LQ8TF46 1054 aaKnown RBP23.33■■□□□ 1.33
SKA3-205ENST00000465471 ZSCAN31Q96LW9 406 aaPredicted RBP23.33■■□□□ 1.33
SKA3-205ENST00000465471 DNM1LO00429 736 aa23.32■■□□□ 1.32
SKA3-205ENST00000465471 ST18O60284 1047 aa23.32■■□□□ 1.32
SKA3-205ENST00000465471 RGS20O76081 388 aa23.32■■□□□ 1.32
SKA3-205ENST00000465471 COL6A1P12109 1028 aa23.32■■□□□ 1.32
SKA3-205ENST00000465471 GJA9P57773 515 aa23.32■■□□□ 1.32
SKA3-205ENST00000465471 LRRC41Q15345 812 aa23.32■■□□□ 1.32
SKA3-205ENST00000465471 DUSP28Q4G0W2 176 aa23.32■■□□□ 1.32
SKA3-205ENST00000465471 TMEM63BQ5T3F8 832 aa23.32■■□□□ 1.32
SKA3-205ENST00000465471 ARRDC4Q8NCT1 418 aa23.32■■□□□ 1.32
SKA3-205ENST00000465471 SCFD2Q8WU76 684 aa23.32■■□□□ 1.32
SKA3-205ENST00000465471 SH2B1Q9NRF2 756 aaPredicted RBP23.32■■□□□ 1.32
SKA3-205ENST00000465471 VPS54Q9P1Q0 977 aa23.32■■□□□ 1.32
SKA3-205ENST00000465471 ADAMTS3O15072 1205 aa23.31■■□□□ 1.32
SKA3-205ENST00000465471 CTAGE5O15320 804 aa23.31■■□□□ 1.32
SKA3-205ENST00000465471 CD2BP2O95400 341 aaKnown RBP23.31■■□□□ 1.32
SKA3-205ENST00000465471 PGK1P00558 417 aa23.31■■□□□ 1.32
SKA3-205ENST00000465471 FDPSP14324 419 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 246 ms