RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 COL22A1Q8NFW1 1626 aaPredicted RBP8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 SETD1BQ9UPS6 1966 aaKnown RBP8.02□□□□□ -1.13
CLSTN1-204ENST00000464286 A0A1W2PQJ5 194 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 GOLGA6L10A6NI86 522 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 TTLL8A6PVC2 850 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 LRRIQ3A6PVS8 624 aaPredicted RBP8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 LGALS16A8MUM7 142 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 ERVH48-1M5A8F1 160 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 PSMA7O14818 248 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 CHUKO15111 745 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 PPFIA3O75145 1194 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 FSBPO95073 299 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 FBXO45P0C2W1 286 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 PHKG2P15735 406 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 BMP6P22004 513 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 ADD2P35612 726 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 GYS2P54840 703 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 GSCP56915 257 aaPredicted RBP8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 RAB15P59190 212 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 TIMM10P62072 90 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 ZBED6P86452 979 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 UBXN1Q04323 297 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 MAP3K12Q12852 859 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 DPYDQ12882 1025 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 TRIM28Q13263 835 aaKnown RBP8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 IFIT5Q13325 482 aaKnown RBP8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 KRT31Q15323 416 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 HSP90AB3PQ58FF7 597 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 TCP11X2Q5H9J9 407 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 FKBP15Q5T1M5 1219 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 CCDC181Q5TID7 509 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 RRAGBQ5VZM2 374 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 ARL6IP4Q66PJ3 421 aaKnown RBP8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 APTXQ7Z2E3 356 aaKnown RBP8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 ANKRD18AQ8IVF6 992 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 BCAS4Q8TDM0 211 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 IGDCC4Q8TDY8 1250 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 SECISBP2LQ93073 1101 aaKnown RBP8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 CAVIN3Q969G5 261 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 AIDAQ96BJ3 306 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 DRC1Q96MC2 740 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 UBAC1Q9BSL1 405 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 TEX13AQ9BXU3 409 aaPredicted RBP8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 NAPBQ9H115 298 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 CUEDC2Q9H467 287 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 LY9Q9HBG7 655 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 DISP2A7MBM2 1401 aa8.01□□□□□ -1.13
CLSTN1-204ENST00000464286 PKD1L3Q7Z443 1732 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 BCL9LQ86UU0 1499 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 LRP6O75581 1613 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 FIGNL2A6NMB9 653 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 HMGB1P1B2RPK0 211 aaPredicted RBP8□□□□□ -1.13
CLSTN1-204ENST00000464286 PATL2C9JE40 543 aaKnown RBP8□□□□□ -1.13
CLSTN1-204ENST00000464286 NDUFAB1O14561 156 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 LILRA1O75019 489 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 PHACTR2O75167 634 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 SYF2O95926 243 aaKnown RBP8□□□□□ -1.13
CLSTN1-204ENST00000464286 IDEP14735 1019 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 ERCC3P19447 782 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 LORP23490 312 aaPredicted RBP8□□□□□ -1.13
CLSTN1-204ENST00000464286 CALML3P27482 149 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 CDC27P30260 824 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 LONP1P36776 959 aaKnown RBP8□□□□□ -1.13
CLSTN1-204ENST00000464286 CCT5P48643 541 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 CABP4P57796 275 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 GNGT1P63211 74 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 GOLGA8FQ08AF8 430 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 GOLGA8DPQ0D2H9 430 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 PAK2Q13177 524 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 NEDD9Q14511 834 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 KCNB1Q14721 858 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 MTF1Q14872 753 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 AKNAD1Q5T1N1 836 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 EMC10Q5UCC4 262 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 WWC2Q6AWC2 1192 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 KLHL10Q6JEL2 608 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 PRPF38AQ8NAV1 312 aaKnown RBP8□□□□□ -1.13
CLSTN1-204ENST00000464286 ZNF784Q8NCA9 323 aaPredicted RBP8□□□□□ -1.13
CLSTN1-204ENST00000464286 AENQ8WTP8 325 aaKnown RBP8□□□□□ -1.13
CLSTN1-204ENST00000464286 DHTKD1Q96HY7 919 aaPredicted RBP8□□□□□ -1.13
CLSTN1-204ENST00000464286 ZNF496Q96IT1 587 aaPredicted RBP8□□□□□ -1.13
CLSTN1-204ENST00000464286 CDC5LQ99459 802 aaKnown RBP8□□□□□ -1.13
CLSTN1-204ENST00000464286 SH3GL2Q99962 352 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 SLF1Q9BQI6 1058 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 EDEM3Q9BZQ6 932 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 CSRNP2Q9H175 543 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 NUCKS1Q9H1E3 243 aaKnown RBP8□□□□□ -1.13
CLSTN1-204ENST00000464286 STK17AQ9UEE5 414 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 GUCA1BQ9UMX6 200 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 CTNND2Q9UQB3 1225 aa8□□□□□ -1.13
CLSTN1-204ENST00000464286 PDS5AQ29RF7 1337 aaKnown RBP8□□□□□ -1.13
CLSTN1-204ENST00000464286 MYH13Q9UKX3 1938 aa7.99□□□□□ -1.13
CLSTN1-204ENST00000464286 BTBD18B2RXH4 712 aa7.99□□□□□ -1.13
CLSTN1-204ENST00000464286 ATP5J2-PTCD1G3V325 749 aa7.99□□□□□ -1.13
CLSTN1-204ENST00000464286 EXOC5O00471 708 aa7.99□□□□□ -1.13
CLSTN1-204ENST00000464286 MEFVO15553 781 aaPredicted RBP7.99□□□□□ -1.13
CLSTN1-204ENST00000464286 TEX33O43247 280 aa7.99□□□□□ -1.13
CLSTN1-204ENST00000464286 GPR37L1O60883 481 aa7.99□□□□□ -1.13
CLSTN1-204ENST00000464286 N4BP1O75113 896 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms