RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 TTLL4Q14679 1199 aa21.95■■□□□ 1.1
SF3A1-205ENST00000463818 CHST3Q7LGC8 479 aa21.95■■□□□ 1.1
SF3A1-205ENST00000463818 RALYLQ86SE5 291 aaKnown RBP21.95■■□□□ 1.1
SF3A1-205ENST00000463818 NCOA7Q8NI08 942 aa21.95■■□□□ 1.1
SF3A1-205ENST00000463818 MTMR8Q96EF0 704 aa21.95■■□□□ 1.1
SF3A1-205ENST00000463818 RMDN3Q96TC7 470 aa21.95■■□□□ 1.1
SF3A1-205ENST00000463818 HIPK3Q9H422 1215 aa21.95■■□□□ 1.1
SF3A1-205ENST00000463818 SENP2Q9HC62 589 aa21.95■■□□□ 1.1
SF3A1-205ENST00000463818 LCTP09848 1927 aa21.94■■□□□ 1.1
SF3A1-205ENST00000463818 ERICH2A1L162 156 aa21.94■■□□□ 1.1
SF3A1-205ENST00000463818 A6NJR5 290 aa21.94■■□□□ 1.1
SF3A1-205ENST00000463818 ARIH2O95376 493 aa21.94■■□□□ 1.1
SF3A1-205ENST00000463818 CFBP00751 764 aa21.94■■□□□ 1.1
SF3A1-205ENST00000463818 SEPT14Q6ZU15 432 aa21.94■■□□□ 1.1
SF3A1-205ENST00000463818 STOX1Q6ZVD7 989 aa21.94■■□□□ 1.1
SF3A1-205ENST00000463818 ZNF365Q70YC5 407 aa21.94■■□□□ 1.1
SF3A1-205ENST00000463818 IWS1Q96ST2 819 aa21.94■■□□□ 1.1
SF3A1-205ENST00000463818 MTG1Q9BT17 334 aaPredicted RBP21.94■■□□□ 1.1
SF3A1-205ENST00000463818 NOC4LQ9BVI4 516 aaKnown RBP21.94■■□□□ 1.1
SF3A1-205ENST00000463818 ALDH8A1Q9H2A2 487 aaPredicted RBP21.94■■□□□ 1.1
SF3A1-205ENST00000463818 TTYH1Q9H313 450 aaPredicted RBP21.94■■□□□ 1.1
SF3A1-205ENST00000463818 ZBTB5O15062 677 aa21.93■■□□□ 1.1
SF3A1-205ENST00000463818 PPP1R11O60927 126 aaPredicted RBP21.93■■□□□ 1.1
SF3A1-205ENST00000463818 GRM4Q14833 912 aa21.93■■□□□ 1.1
SF3A1-205ENST00000463818 WTAPQ15007 396 aa21.93■■□□□ 1.1
SF3A1-205ENST00000463818 STXBP2Q15833 593 aa21.93■■□□□ 1.1
SF3A1-205ENST00000463818 LAMA4Q16363 1823 aa21.93■■□□□ 1.1
SF3A1-205ENST00000463818 SLC35G1Q2M3R5 365 aa21.93■■□□□ 1.1
SF3A1-205ENST00000463818 UMODL1Q5DID0 1318 aa21.93■■□□□ 1.1
SF3A1-205ENST00000463818 ARHGEF16Q5VV41 709 aa21.93■■□□□ 1.1
SF3A1-205ENST00000463818 CCDC62Q6P9F0 684 aa21.93■■□□□ 1.1
SF3A1-205ENST00000463818 CDX2Q99626 313 aaPredicted RBP21.93■■□□□ 1.1
SF3A1-205ENST00000463818 IL23AQ9NPF7 189 aa21.93■■□□□ 1.1
SF3A1-205ENST00000463818 PCDHA1Q9Y5I3 950 aa21.93■■□□□ 1.1
SF3A1-205ENST00000463818 OPLAHO14841 1288 aa21.92■■□□□ 1.1
SF3A1-205ENST00000463818 KPNA6O60684 536 aa21.92■■□□□ 1.1
SF3A1-205ENST00000463818 EIF2AK2P19525 551 aaKnown RBP21.92■■□□□ 1.1
SF3A1-205ENST00000463818 CCL23P55773 120 aa21.92■■□□□ 1.1
SF3A1-205ENST00000463818 SART3Q15020 963 aaKnown RBP21.92■■□□□ 1.1
SF3A1-205ENST00000463818 LY6KQ17RY6 165 aa21.92■■□□□ 1.1
SF3A1-205ENST00000463818 NBPF20Q3BBV1 942 aa21.92■■□□□ 1.1
SF3A1-205ENST00000463818 RIOX1Q9H6W3 641 aa21.92■■□□□ 1.1
SF3A1-205ENST00000463818 TRMT13Q9NUP7 481 aaKnown RBP21.92■■□□□ 1.1
SF3A1-205ENST00000463818 RBM8AQ9Y5S9 174 aaKnown RBP21.92■■□□□ 1.1
SF3A1-205ENST00000463818 LRRC37A2A6NM11 1700 aa21.92■■□□□ 1.1
SF3A1-205ENST00000463818 NR3C2P08235 984 aa21.91■■□□□ 1.1
SF3A1-205ENST00000463818 HSD17B4P51659 736 aa21.91■■□□□ 1.1
SF3A1-205ENST00000463818 ANTXR2P58335 489 aa21.91■■□□□ 1.1
SF3A1-205ENST00000463818 TROAPQ12815 778 aa21.91■■□□□ 1.1
SF3A1-205ENST00000463818 TMEM67Q5HYA8 995 aa21.91■■□□□ 1.1
SF3A1-205ENST00000463818 RASIP1Q5U651 963 aa21.91■■□□□ 1.1
SF3A1-205ENST00000463818 PSRC1Q6PGN9 363 aaPredicted RBP21.91■■□□□ 1.1
SF3A1-205ENST00000463818 IGDCC4Q8TDY8 1250 aa21.91■■□□□ 1.1
SF3A1-205ENST00000463818 PIGSQ96S52 555 aa21.91■■□□□ 1.1
SF3A1-205ENST00000463818 EIF3JO75822 258 aaKnown RBP21.9■■□□□ 1.1
SF3A1-205ENST00000463818 FGBP02675 491 aa21.9■■□□□ 1.1
SF3A1-205ENST00000463818 SUPT20HL2P0C7V6 817 aa21.9■■□□□ 1.1
SF3A1-205ENST00000463818 HOMER1Q86YM7 354 aa21.9■■□□□ 1.1
SF3A1-205ENST00000463818 MB21D2Q8IYB1 491 aaPredicted RBP21.9■■□□□ 1.1
SF3A1-205ENST00000463818 PPP1R13LQ8WUF5 828 aa21.9■■□□□ 1.1
SF3A1-205ENST00000463818 PXMP2Q9NR77 195 aa21.9■■□□□ 1.1
SF3A1-205ENST00000463818 GRXCR1A8MXD5 290 aa21.89■■□□□ 1.09
SF3A1-205ENST00000463818 GH1P01241 217 aa21.89■■□□□ 1.09
SF3A1-205ENST00000463818 CYP2C9P11712 490 aa21.89■■□□□ 1.09
SF3A1-205ENST00000463818 GHRHRQ02643 423 aa21.89■■□□□ 1.09
SF3A1-205ENST00000463818 FAM47CQ5HY64 1035 aa21.89■■□□□ 1.09
SF3A1-205ENST00000463818 CATIPQ7Z7H3 387 aa21.89■■□□□ 1.09
SF3A1-205ENST00000463818 AFG1LQ8WV93 481 aa21.89■■□□□ 1.09
SF3A1-205ENST00000463818 HERVK_113Q902F9 699 aa21.89■■□□□ 1.09
SF3A1-205ENST00000463818 WNT8AQ9H1J5 351 aa21.89■■□□□ 1.09
SF3A1-205ENST00000463818 MAP3K20Q9NYL2 800 aaKnown RBP21.89■■□□□ 1.09
SF3A1-205ENST00000463818 DDX41Q9UJV9 622 aaKnown RBP21.89■■□□□ 1.09
SF3A1-205ENST00000463818 TMEM265A0A087WTH1 108 aa21.88■■□□□ 1.09
SF3A1-205ENST00000463818 CYTH3O43739 400 aa21.88■■□□□ 1.09
SF3A1-205ENST00000463818 DNAJB2P25686 324 aa21.88■■□□□ 1.09
SF3A1-205ENST00000463818 HOXA13P31271 388 aaPredicted RBP21.88■■□□□ 1.09
SF3A1-205ENST00000463818 ARHGAP1Q07960 439 aa21.88■■□□□ 1.09
SF3A1-205ENST00000463818 TRAF1Q13077 416 aa21.88■■□□□ 1.09
SF3A1-205ENST00000463818 SAMD3Q8N6K7 520 aa21.88■■□□□ 1.09
SF3A1-205ENST00000463818 SCLYQ96I15 445 aa21.88■■□□□ 1.09
SF3A1-205ENST00000463818 LSG1Q9H089 658 aaKnown RBP21.88■■□□□ 1.09
SF3A1-205ENST00000463818 LAMA2P24043 3122 aaKnown RBP21.88■■□□□ 1.09
SF3A1-205ENST00000463818 COL6A3P12111 3177 aa21.87■■□□□ 1.09
SF3A1-205ENST00000463818 PNMA6FA0A0J9YX94 578 aa21.87■■□□□ 1.09
SF3A1-205ENST00000463818 MYCLP12524 364 aaPredicted RBP21.87■■□□□ 1.09
SF3A1-205ENST00000463818 CHMP4BP1P59074 171 aa21.87■■□□□ 1.09
SF3A1-205ENST00000463818 NFRKBQ6P4R8 1299 aa21.87■■□□□ 1.09
SF3A1-205ENST00000463818 RPUSD2Q8IZ73 545 aaKnown RBP21.87■■□□□ 1.09
SF3A1-205ENST00000463818 MYLIPQ8WY64 445 aa21.87■■□□□ 1.09
SF3A1-205ENST00000463818 PDCD2LQ9BRP1 358 aa21.87■■□□□ 1.09
SF3A1-205ENST00000463818 GCOM1H8Y6P7 765 aaPredicted RBP21.86■■□□□ 1.09
SF3A1-205ENST00000463818 MMP3P08254 477 aa21.86■■□□□ 1.09
SF3A1-205ENST00000463818 POLR2MP0CAP2 368 aa21.86■■□□□ 1.09
SF3A1-205ENST00000463818 PTPN11Q06124 597 aaPredicted RBP21.86■■□□□ 1.09
SF3A1-205ENST00000463818 OTOP2Q7RTS6 562 aa21.86■■□□□ 1.09
SF3A1-205ENST00000463818 VSIG10LQ86VR7 867 aa21.86■■□□□ 1.09
SF3A1-205ENST00000463818 PIBF1Q8WXW3 757 aa21.86■■□□□ 1.09
SF3A1-205ENST00000463818 ESYT1Q9BSJ8 1104 aa21.86■■□□□ 1.09
SF3A1-205ENST00000463818 CXXC1Q9P0U4 656 aaPredicted RBP21.86■■□□□ 1.09
SF3A1-205ENST00000463818 MRVI1Q9Y6F6 885 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms