RNA–Protein interactions for RNA: ENST00000463591.1

PRDM16-204, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 384 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-204ENST00000463591 FAM109BQ6ICB4 259 aaPredicted RBP23.7■■□□□ 1.38
PRDM16-204ENST00000463591 CASC1Q6TDU7 716 aa23.7■■□□□ 1.38
PRDM16-204ENST00000463591 TMTC2Q8N394 836 aa23.7■■□□□ 1.38
PRDM16-204ENST00000463591 DEFB123Q8N688 67 aa23.7■■□□□ 1.38
PRDM16-204ENST00000463591 RMDN3Q96TC7 470 aa23.7■■□□□ 1.38
PRDM16-204ENST00000463591 PCDHA1Q9Y5I3 950 aa23.7■■□□□ 1.38
PRDM16-204ENST00000463591 CFBP00751 764 aa23.69■■□□□ 1.38
PRDM16-204ENST00000463591 TXNP10599 105 aaKnown RBP23.69■■□□□ 1.38
PRDM16-204ENST00000463591 ARHGEF16Q5VV41 709 aa23.69■■□□□ 1.38
PRDM16-204ENST00000463591 SENP2Q9HC62 589 aa23.69■■□□□ 1.38
PRDM16-204ENST00000463591 GPHNQ9NQX3 736 aaPredicted RBP23.69■■□□□ 1.38
PRDM16-204ENST00000463591 COL20A1Q9P218 1284 aa23.69■■□□□ 1.38
PRDM16-204ENST00000463591 GRIN2DO15399 1336 aa23.68■■□□□ 1.38
PRDM16-204ENST00000463591 PNMA6FA0A0J9YX94 578 aa23.68■■□□□ 1.38
PRDM16-204ENST00000463591 MCM5P33992 734 aa23.68■■□□□ 1.38
PRDM16-204ENST00000463591 HSD17B4P51659 736 aa23.68■■□□□ 1.38
PRDM16-204ENST00000463591 NECTIN1Q15223 517 aa23.68■■□□□ 1.38
PRDM16-204ENST00000463591 TMEM199Q8N511 208 aa23.68■■□□□ 1.38
PRDM16-204ENST00000463591 TMEM87BQ96K49 555 aa23.68■■□□□ 1.38
PRDM16-204ENST00000463591 LAMA3Q16787 3333 aa23.67■■□□□ 1.38
PRDM16-204ENST00000463591 A6NJR5 290 aa23.67■■□□□ 1.38
PRDM16-204ENST00000463591 PPP1R11O60927 126 aaPredicted RBP23.67■■□□□ 1.38
PRDM16-204ENST00000463591 PURAQ00577 322 aaKnown RBP23.67■■□□□ 1.38
PRDM16-204ENST00000463591 PPIGQ13427 754 aaKnown RBP eCLIP23.67■■□□□ 1.38
PRDM16-204ENST00000463591 PIGSQ96S52 555 aa23.67■■□□□ 1.38
PRDM16-204ENST00000463591 MTG1Q9BT17 334 aaPredicted RBP23.67■■□□□ 1.38
PRDM16-204ENST00000463591 ANO2Q9NQ90 1003 aa23.67■■□□□ 1.38
PRDM16-204ENST00000463591 MYH6P13533 1939 aa23.67■■□□□ 1.38
PRDM16-204ENST00000463591 OPLAHO14841 1288 aa23.66■■□□□ 1.38
PRDM16-204ENST00000463591 SLC27A2O14975 620 aa23.66■■□□□ 1.38
PRDM16-204ENST00000463591 PRC1O43663 620 aa23.66■■□□□ 1.38
PRDM16-204ENST00000463591 EIF3JO75822 258 aaKnown RBP23.66■■□□□ 1.38
PRDM16-204ENST00000463591 DDAH1O94760 285 aa23.66■■□□□ 1.38
PRDM16-204ENST00000463591 MYL3P08590 195 aa23.66■■□□□ 1.38
PRDM16-204ENST00000463591 SMARCA1P28370 1054 aa23.66■■□□□ 1.38
PRDM16-204ENST00000463591 KIF5BP33176 963 aa23.66■■□□□ 1.38
PRDM16-204ENST00000463591 SMAD3P84022 425 aaKnown RBP23.66■■□□□ 1.38
PRDM16-204ENST00000463591 CREB3L3Q68CJ9 461 aa23.66■■□□□ 1.38
PRDM16-204ENST00000463591 CCDC62Q6P9F0 684 aa23.66■■□□□ 1.38
PRDM16-204ENST00000463591 HOMER1Q86YM7 354 aa23.66■■□□□ 1.38
PRDM16-204ENST00000463591 LY9Q9HBG7 655 aa23.66■■□□□ 1.38
PRDM16-204ENST00000463591 PXMP2Q9NR77 195 aa23.66■■□□□ 1.38
PRDM16-204ENST00000463591 MTMR10Q9NXD2 777 aa23.66■■□□□ 1.38
PRDM16-204ENST00000463591 CYTH3O43739 400 aa23.65■■□□□ 1.38
PRDM16-204ENST00000463591 NR3C2P08235 984 aa23.65■■□□□ 1.38
PRDM16-204ENST00000463591 SUPT20HL2P0C7V6 817 aa23.65■■□□□ 1.38
PRDM16-204ENST00000463591 EPHB4P54760 987 aa23.65■■□□□ 1.38
PRDM16-204ENST00000463591 SLC35G1Q2M3R5 365 aa23.65■■□□□ 1.38
PRDM16-204ENST00000463591 CTCFLQ8NI51 663 aaPredicted RBP23.65■■□□□ 1.38
PRDM16-204ENST00000463591 RNPC3Q96LT9 517 aaKnown RBP23.65■■□□□ 1.38
PRDM16-204ENST00000463591 ARIH2O95376 493 aa23.64■■□□□ 1.37
PRDM16-204ENST00000463591 GH1P01241 217 aa23.64■■□□□ 1.37
PRDM16-204ENST00000463591 EIF2AK2P19525 551 aaKnown RBP23.64■■□□□ 1.37
PRDM16-204ENST00000463591 LIFRP42702 1097 aa23.64■■□□□ 1.37
PRDM16-204ENST00000463591 GNAQP50148 359 aa23.64■■□□□ 1.37
PRDM16-204ENST00000463591 PSMC6P62333 389 aa23.64■■□□□ 1.37
PRDM16-204ENST00000463591 RNF20Q5VTR2 975 aa23.64■■□□□ 1.37
PRDM16-204ENST00000463591 SEPT14Q6ZU15 432 aa23.64■■□□□ 1.37
PRDM16-204ENST00000463591 Q7L0L9 218 aa23.64■■□□□ 1.37
PRDM16-204ENST00000463591 ZNF654Q8IZM8 581 aa23.64■■□□□ 1.37
PRDM16-204ENST00000463591 COPS5Q92905 334 aa23.64■■□□□ 1.37
PRDM16-204ENST00000463591 LZTS2Q9BRK4 669 aa23.64■■□□□ 1.37
PRDM16-204ENST00000463591 CCDC69A6NI79 296 aa23.63■■□□□ 1.37
PRDM16-204ENST00000463591 GCOM1H8Y6P7 765 aaPredicted RBP23.63■■□□□ 1.37
PRDM16-204ENST00000463591 POLR2MP0CAP2 368 aa23.63■■□□□ 1.37
PRDM16-204ENST00000463591 CALM1P0DP23 149 aa23.63■■□□□ 1.37
PRDM16-204ENST00000463591 CALM2P0DP24 149 aa23.63■■□□□ 1.37
PRDM16-204ENST00000463591 CALM3P0DP25 149 aa23.63■■□□□ 1.37
PRDM16-204ENST00000463591 SPZ1Q9BXG8 430 aa23.63■■□□□ 1.37
PRDM16-204ENST00000463591 PPP1R12CQ9BZL4 782 aa23.63■■□□□ 1.37
PRDM16-204ENST00000463591 ALDH8A1Q9H2A2 487 aaPredicted RBP23.63■■□□□ 1.37
PRDM16-204ENST00000463591 HIPK3Q9H422 1215 aa23.63■■□□□ 1.37
PRDM16-204ENST00000463591 SH2B2O14492 632 aaPredicted RBP23.62■■□□□ 1.37
PRDM16-204ENST00000463591 B4GALT4O60513 344 aa23.62■■□□□ 1.37
PRDM16-204ENST00000463591 PTPN11Q06124 597 aaPredicted RBP23.62■■□□□ 1.37
PRDM16-204ENST00000463591 KCNV1Q6PIU1 500 aa23.62■■□□□ 1.37
PRDM16-204ENST00000463591 NFXL1Q6ZNB6 911 aa23.62■■□□□ 1.37
PRDM16-204ENST00000463591 PDCD2LQ9BRP1 358 aa23.62■■□□□ 1.37
PRDM16-204ENST00000463591 TRPV6Q9H1D0 765 aa23.62■■□□□ 1.37
PRDM16-204ENST00000463591 CSF2RAP15509 400 aa23.61■■□□□ 1.37
PRDM16-204ENST00000463591 LY6KQ17RY6 165 aa23.61■■□□□ 1.37
PRDM16-204ENST00000463591 NFRKBQ6P4R8 1299 aa23.61■■□□□ 1.37
PRDM16-204ENST00000463591 RRP36Q96EU6 259 aaKnown RBP23.61■■□□□ 1.37
PRDM16-204ENST00000463591 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.61■■□□□ 1.37
PRDM16-204ENST00000463591 DDX41Q9UJV9 622 aaKnown RBP23.61■■□□□ 1.37
PRDM16-204ENST00000463591 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.6■■□□□ 1.37
PRDM16-204ENST00000463591 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.6■■□□□ 1.37
PRDM16-204ENST00000463591 CDC45O75419 566 aa23.6■■□□□ 1.37
PRDM16-204ENST00000463591 HOXA13P31271 388 aaPredicted RBP23.6■■□□□ 1.37
PRDM16-204ENST00000463591 CYP2C18P33260 490 aa23.6■■□□□ 1.37
PRDM16-204ENST00000463591 NBPF20Q3BBV1 942 aa23.6■■□□□ 1.37
PRDM16-204ENST00000463591 TMEM240Q5SV17 173 aa23.6■■□□□ 1.37
PRDM16-204ENST00000463591 ZNF697Q5TEC3 545 aa23.6■■□□□ 1.37
PRDM16-204ENST00000463591 PSRC1Q6PGN9 363 aaPredicted RBP23.6■■□□□ 1.37
PRDM16-204ENST00000463591 VSIG10LQ86VR7 867 aa23.6■■□□□ 1.37
PRDM16-204ENST00000463591 CCDC136Q96JN2 1154 aa23.6■■□□□ 1.37
PRDM16-204ENST00000463591 STXBP5LQ9Y2K9 1186 aa23.6■■□□□ 1.37
PRDM16-204ENST00000463591 CASTP20810 708 aaKnown RBP23.59■■□□□ 1.37
PRDM16-204ENST00000463591 ARHGAP1Q07960 439 aa23.59■■□□□ 1.37
PRDM16-204ENST00000463591 LAMC2Q13753 1193 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms