RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 FGD1P98174 961 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 TSGA10IPQ3SY00 556 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 HABP4Q5JVS0 413 aaKnown RBP9.98□□□□□ -0.81
TMEM254-208ENST00000463209 ARHGEF16Q5VV41 709 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 ERICH6BQ5W0A0 696 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 BLOC1S2Q6QNY1 142 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 CXCL17Q6UXB2 119 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 SEPT14Q6ZU15 432 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 SGMS1Q86VZ5 419 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 MCF2L2Q86YR7 1114 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 FANCBQ8NB91 859 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 KCNB2Q92953 911 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 BRF1Q92994 677 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 RRP36Q96EU6 259 aaKnown RBP9.98□□□□□ -0.81
TMEM254-208ENST00000463209 SPZ1Q9BXG8 430 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 WDR11Q9BZH6 1224 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 PNMA2Q9UL42 364 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 CNTNAP5Q8WYK1 1306 aa9.98□□□□□ -0.81
TMEM254-208ENST00000463209 GOLGA8AA7E2F4 631 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 ZBTB43O43298 467 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 MYCLP12524 364 aaPredicted RBP9.97□□□□□ -0.81
TMEM254-208ENST00000463209 CAPN2P17655 700 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 RPS6KB1P23443 525 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 CDC27P30260 824 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 TLE2Q04725 743 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 KRT32Q14532 448 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 FSCN1Q16658 493 aaKnown RBP9.97□□□□□ -0.81
TMEM254-208ENST00000463209 UBE2SQ16763 222 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 RTN1Q16799 776 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 USP17L6PQ6QN14 398 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 HEATR3Q7Z4Q2 680 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 RGS22Q8NE09 1264 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 OR6J1Q8NGC5 347 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 NSUN6Q8TEA1 469 aaKnown RBP9.97□□□□□ -0.81
TMEM254-208ENST00000463209 VTI1AQ96AJ9 217 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 UPF3BQ9BZI7 483 aaKnown RBP9.97□□□□□ -0.81
TMEM254-208ENST00000463209 AP5M1Q9H0R1 490 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 STARD7Q9NQZ5 370 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 PXMP2Q9NR77 195 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 SEC63Q9UGP8 760 aaKnown RBP9.97□□□□□ -0.81
TMEM254-208ENST00000463209 DOCK5Q9H7D0 1870 aa9.97□□□□□ -0.81
TMEM254-208ENST00000463209 DNAH12Q6ZR08 3092 aa9.96□□□□□ -0.81
TMEM254-208ENST00000463209 TRIM43BA6NCK2 446 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 GCOM1H8Y6P7 765 aaPredicted RBP9.96□□□□□ -0.82
TMEM254-208ENST00000463209 SEC24BO95487 1268 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 MYL3P08590 195 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 POLR2MP0CAP2 368 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 CALM1P0DP23 149 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 CALM2P0DP24 149 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 CALM3P0DP25 149 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 TXNP10599 105 aaKnown RBP9.96□□□□□ -0.82
TMEM254-208ENST00000463209 CST5P28325 142 aaPredicted RBP9.96□□□□□ -0.82
TMEM254-208ENST00000463209 CHMP4BP1P59074 171 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 SNX17Q15036 470 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 PGM5Q15124 567 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 PPP2R5BQ15173 497 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 LY6KQ17RY6 165 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 DUSP28Q4G0W2 176 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 WWC2Q6AWC2 1192 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 IQSEC1Q6DN90 963 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 SYNE3Q6ZMZ3 975 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 TMTC2Q8N394 836 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 DNERQ8NFT8 737 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 TRIM43Q96BQ3 446 aaPredicted RBP9.96□□□□□ -0.82
TMEM254-208ENST00000463209 MAP3K14Q99558 947 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 MTA3Q9BTC8 594 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 USP26Q9BXU7 913 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 SPC25Q9HBM1 224 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 NCOA5Q9HCD5 579 aaKnown RBP9.96□□□□□ -0.82
TMEM254-208ENST00000463209 PDLIM7Q9NR12 457 aa9.96□□□□□ -0.82
TMEM254-208ENST00000463209 FAM217BQ9NTX9 383 aaPredicted RBP9.96□□□□□ -0.82
TMEM254-208ENST00000463209 RBM47A0AV96 593 aaKnown RBP9.95□□□□□ -0.82
TMEM254-208ENST00000463209 MOXD2PA6NHM9 499 aa9.95□□□□□ -0.82
TMEM254-208ENST00000463209 ADAMTS3O15072 1205 aa9.95□□□□□ -0.82
TMEM254-208ENST00000463209 RGS20O76081 388 aa9.95□□□□□ -0.82
TMEM254-208ENST00000463209 NR3C2P08235 984 aa9.95□□□□□ -0.82
TMEM254-208ENST00000463209 ITGB8P26012 769 aa9.95□□□□□ -0.82
TMEM254-208ENST00000463209 ADD1P35611 737 aaKnown RBP9.95□□□□□ -0.82
TMEM254-208ENST00000463209 FUT2Q10981 343 aa9.95□□□□□ -0.82
TMEM254-208ENST00000463209 TOB2Q14106 344 aaPredicted RBP9.95□□□□□ -0.82
TMEM254-208ENST00000463209 TYW1BQ6NUM6 668 aa9.95□□□□□ -0.82
TMEM254-208ENST00000463209 PCSK9Q8NBP7 692 aaKnown RBP9.95□□□□□ -0.82
TMEM254-208ENST00000463209 SCFD2Q8WU76 684 aa9.95□□□□□ -0.82
TMEM254-208ENST00000463209 PGBD1Q96JS3 809 aa9.95□□□□□ -0.82
TMEM254-208ENST00000463209 MPHOSPH6Q99547 160 aaKnown RBP9.95□□□□□ -0.82
TMEM254-208ENST00000463209 LZTS2Q9BRK4 669 aa9.95□□□□□ -0.82
TMEM254-208ENST00000463209 PDCD2LQ9BRP1 358 aa9.95□□□□□ -0.82
TMEM254-208ENST00000463209 PRO3102Q9H379 93 aa9.95□□□□□ -0.82
TMEM254-208ENST00000463209 BCAS3Q9H6U6 928 aa9.95□□□□□ -0.82
TMEM254-208ENST00000463209 GRIN2DO15399 1336 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 A0A0U1RQG5 324 aaPredicted RBP9.94□□□□□ -0.82
TMEM254-208ENST00000463209 SOX1O00570 391 aaPredicted RBP9.94□□□□□ -0.82
TMEM254-208ENST00000463209 MEIS2O14770 477 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 HMGB1P09429 215 aaKnown RBP9.94□□□□□ -0.82
TMEM254-208ENST00000463209 CLTBP09497 229 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 GNAQP50148 359 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 METAP2P50579 478 aaKnown RBP eCLIP9.94□□□□□ -0.82
TMEM254-208ENST00000463209 CCT2P78371 535 aaKnown RBP9.94□□□□□ -0.82
TMEM254-208ENST00000463209 GHRHRQ02643 423 aa9.94□□□□□ -0.82
TMEM254-208ENST00000463209 STK3Q13188 491 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms