RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 TMEM266Q2M3C6 531 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 NYAP1Q6ZVC0 841 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 TC2NQ8N9U0 490 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 PRIMPOLQ96LW4 560 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 TAOK3Q9H2K8 898 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 ARHGEF10LQ9HCE6 1279 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 LIMA1Q9UHB6 759 aaKnown RBP11.42□□□□□ -0.58
MSH5-211ENST00000463144 MYMKA6NI61 221 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 CAP2P40123 477 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 KCNJ6P48051 423 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 STK4Q13043 487 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 SEMA3FQ13275 785 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 MCM6Q14566 821 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 TMEM119Q4V9L6 283 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 MYRIPQ8NFW9 859 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 GLIS2Q9BZE0 524 aaPredicted RBP11.42□□□□□ -0.58
MSH5-211ENST00000463144 MTFR1LQ9H019 292 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 KCNMB3Q9NPA1 279 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 MYOZ2Q9NPC6 264 aa11.42□□□□□ -0.58
MSH5-211ENST00000463144 ADKP55263 362 aaKnown RBP11.41□□□□□ -0.58
MSH5-211ENST00000463144 PDE4DQ08499 809 aa11.41□□□□□ -0.58
MSH5-211ENST00000463144 AP3B2Q13367 1082 aa11.41□□□□□ -0.58
MSH5-211ENST00000463144 KRT31Q15323 416 aa11.41□□□□□ -0.58
MSH5-211ENST00000463144 FAM83BQ5T0W9 1011 aa11.41□□□□□ -0.58
MSH5-211ENST00000463144 CCDC84Q86UT8 332 aaPredicted RBP11.41□□□□□ -0.58
MSH5-211ENST00000463144 SNX29Q8TEQ0 813 aa11.41□□□□□ -0.58
MSH5-211ENST00000463144 HPS3Q969F9 1004 aa11.41□□□□□ -0.58
MSH5-211ENST00000463144 STK17AQ9UEE5 414 aa11.41□□□□□ -0.58
MSH5-211ENST00000463144 PCDHA12Q9UN75 941 aa11.41□□□□□ -0.58
MSH5-211ENST00000463144 FCER1AP12319 257 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 PRELPP51888 382 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 STAT2P52630 851 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 ASIC1P78348 528 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 ARHGAP4P98171 946 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 TCP11X2Q5H9J9 407 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 KRT79Q5XKE5 535 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 SV2BQ7L1I2 683 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 RAD54LQ92698 747 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 RAB34Q9BZG1 259 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 PPP1R1BQ9UD71 204 aaPredicted RBP11.4□□□□□ -0.58
MSH5-211ENST00000463144 H7C1D1 291 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 POLD1P28340 1107 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 CCT6AP40227 531 aaKnown RBP11.4□□□□□ -0.58
MSH5-211ENST00000463144 ZNF280AP59817 542 aaPredicted RBP11.4□□□□□ -0.58
MSH5-211ENST00000463144 AMPD3Q01432 767 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 ZYXQ15942 572 aaKnown RBP11.4□□□□□ -0.58
MSH5-211ENST00000463144 TTI2Q6NXR4 508 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 JDP2Q8WYK2 163 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 TBC1D5Q92609 795 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 LARP4BQ92615 738 aaKnown RBP11.4□□□□□ -0.58
MSH5-211ENST00000463144 LENG9Q96B70 501 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 CTAGE1Q96RT6 745 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 NAP1L4Q99733 375 aaKnown RBP11.4□□□□□ -0.58
MSH5-211ENST00000463144 DUSP9Q99956 384 aaKnown RBP11.4□□□□□ -0.58
MSH5-211ENST00000463144 VPS16Q9H269 839 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 VCPKMTQ9H867 229 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 GOPCQ9HD26 462 aa11.4□□□□□ -0.58
MSH5-211ENST00000463144 ATAD5Q96QE3 1844 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 PSDA5PKW4 1024 aaPredicted RBP11.39□□□□□ -0.59
MSH5-211ENST00000463144 PHF20L1A8MW92 1017 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 KCNJ18B7U540 433 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 RIOK3O14730 519 aaKnown RBP11.39□□□□□ -0.59
MSH5-211ENST00000463144 HOXA13P31271 388 aaPredicted RBP11.39□□□□□ -0.59
MSH5-211ENST00000463144 COPB1P53618 953 aaKnown RBP11.39□□□□□ -0.59
MSH5-211ENST00000463144 KCNJ12Q14500 433 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 RASA3Q14644 834 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 CEP135Q66GS9 1140 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 KIAA0895Q8NCT3 520 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 CCDC112Q8NEF3 446 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 ETNPPLQ8TBG4 499 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 CDK5RAP3Q96JB5 506 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 PPP1R13BQ96KQ4 1090 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 TEPSINQ96N21 525 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 SGIP1Q9BQI5 828 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 EXOC1Q9NV70 894 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 TAB2Q9NYJ8 693 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 FAM86B1E9PN63 330 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 MARCH6O60337 910 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 FAM86B2P0C5J1 330 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 SREBF1P36956 1147 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 RBL2Q08999 1139 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 TNIP1Q15025 636 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 HYIQ5T013 277 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 MOXD1Q6UVY6 613 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 DYMQ7RTS9 669 aa11.39□□□□□ -0.59
MSH5-211ENST00000463144 DHTKD1Q96HY7 919 aaPredicted RBP11.39□□□□□ -0.59
MSH5-211ENST00000463144 RANBP17Q9H2T7 1088 aaKnown RBP11.39□□□□□ -0.59
MSH5-211ENST00000463144 ASTN2O75129 1339 aaPredicted RBP11.38□□□□□ -0.59
MSH5-211ENST00000463144 PSMA7O14818 248 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 FOSP01100 380 aaPredicted RBP11.38□□□□□ -0.59
MSH5-211ENST00000463144 CCNE1P24864 410 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 GTF2F1P35269 517 aaKnown RBP eCLIP11.38□□□□□ -0.597e-15■■■■□ 25.6
MSH5-211ENST00000463144 STAT3P40763 770 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 SPIRE1Q08AE8 756 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 R3HDM1Q15032 1099 aaKnown RBP11.38□□□□□ -0.59
MSH5-211ENST00000463144 PTPN14Q15678 1187 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 Q4G0T1 1027 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 FILIP1LQ4L180 1135 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 ANKRD40Q6AI12 368 aa11.38□□□□□ -0.59
MSH5-211ENST00000463144 MCTP2Q6DN12 878 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms