RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 AIFM3Q96NN9 605 aa19.2■□□□□ 0.66
HLA-DPA1-245ENST00000463066 ABHD16BQ9H3Z7 469 aa19.2■□□□□ 0.66
HLA-DPA1-245ENST00000463066 PXMP2Q9NR77 195 aa19.2■□□□□ 0.66
HLA-DPA1-245ENST00000463066 OGDHLQ9ULD0 1010 aa19.2■□□□□ 0.66
HLA-DPA1-245ENST00000463066 MCM3APO60318 1980 aa19.2■□□□□ 0.66
HLA-DPA1-245ENST00000463066 CPLX1O14810 134 aa19.19■□□□□ 0.66
HLA-DPA1-245ENST00000463066 PDE4DQ08499 809 aa19.19■□□□□ 0.66
HLA-DPA1-245ENST00000463066 GJC2Q5T442 439 aaPredicted RBP19.19■□□□□ 0.66
HLA-DPA1-245ENST00000463066 ARHGEF16Q5VV41 709 aa19.19■□□□□ 0.66
HLA-DPA1-245ENST00000463066 TAPT1Q6NXT6 567 aa19.19■□□□□ 0.66
HLA-DPA1-245ENST00000463066 DNERQ8NFT8 737 aa19.19■□□□□ 0.66
HLA-DPA1-245ENST00000463066 NSUN6Q8TEA1 469 aaKnown RBP19.19■□□□□ 0.66
HLA-DPA1-245ENST00000463066 PSTPIP2Q9H939 334 aa19.19■□□□□ 0.66
HLA-DPA1-245ENST00000463066 BARHL2Q9NY43 387 aa19.19■□□□□ 0.66
HLA-DPA1-245ENST00000463066 CENPFP49454 3210 aa19.19■□□□□ 0.66
HLA-DPA1-245ENST00000463066 LRRC37A2A6NM11 1700 aa19.18■□□□□ 0.66
HLA-DPA1-245ENST00000463066 MYCNP04198 464 aaPredicted RBP19.18■□□□□ 0.66
HLA-DPA1-245ENST00000463066 AKR1A1P14550 325 aa19.18■□□□□ 0.66
HLA-DPA1-245ENST00000463066 SMARCC2Q8TAQ2 1214 aa19.18■□□□□ 0.66
HLA-DPA1-245ENST00000463066 PDCD2LQ9BRP1 358 aa19.18■□□□□ 0.66
HLA-DPA1-245ENST00000463066 RNF26Q9BY78 433 aaPredicted RBP19.18■□□□□ 0.66
HLA-DPA1-245ENST00000463066 MAF1Q9H063 256 aa19.18■□□□□ 0.66
HLA-DPA1-245ENST00000463066 FAM184BQ9ULE4 1060 aa19.18■□□□□ 0.66
HLA-DPA1-245ENST00000463066 RBBP6Q7Z6E9 1792 aaKnown RBP19.18■□□□□ 0.66
HLA-DPA1-245ENST00000463066 FARP2O94887 1054 aaPredicted RBP19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 CD2BP2O95400 341 aaKnown RBP19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 PGK1P00558 417 aa19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 NR3C2P08235 984 aa19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 MYCLP12524 364 aaPredicted RBP19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 RGS19P49795 217 aa19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 AKAP17AQ02040 695 aaKnown RBP19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 SSRP1Q08945 709 aaKnown RBP19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 RABEP1Q15276 862 aa19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 GTF3C6Q969F1 213 aa19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 PGBD1Q96JS3 809 aa19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 VTA1Q9NP79 307 aa19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 TMEM260Q9NX78 707 aa19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 VPS54Q9P1Q0 977 aa19.17■□□□□ 0.66
HLA-DPA1-245ENST00000463066 MYADML2A6NDP7 307 aa19.16■□□□□ 0.66
HLA-DPA1-245ENST00000463066 SMCO2A6NFE2 343 aa19.16■□□□□ 0.66
HLA-DPA1-245ENST00000463066 PIK3CDO00329 1044 aa19.16■□□□□ 0.66
HLA-DPA1-245ENST00000463066 SMPD1P17405 629 aa19.16■□□□□ 0.66
HLA-DPA1-245ENST00000463066 ADCY7P51828 1080 aa19.16■□□□□ 0.66
HLA-DPA1-245ENST00000463066 PGM5Q15124 567 aa19.16■□□□□ 0.66
HLA-DPA1-245ENST00000463066 PPP1R18Q6NYC8 613 aa19.16■□□□□ 0.66
HLA-DPA1-245ENST00000463066 UBE2Q1Q7Z7E8 422 aa19.16■□□□□ 0.66
HLA-DPA1-245ENST00000463066 CUL5Q93034 780 aa19.16■□□□□ 0.66
HLA-DPA1-245ENST00000463066 XPNPEP3Q9NQH7 507 aa19.16■□□□□ 0.66
HLA-DPA1-245ENST00000463066 MAP3K20Q9NYL2 800 aaKnown RBP19.16■□□□□ 0.66
HLA-DPA1-245ENST00000463066 LIMCH1Q9UPQ0 1083 aa19.16■□□□□ 0.66
HLA-DPA1-245ENST00000463066 JAK2O60674 1132 aa19.15■□□□□ 0.66
HLA-DPA1-245ENST00000463066 MSCO60682 206 aa19.15■□□□□ 0.66
HLA-DPA1-245ENST00000463066 RARBP10826 455 aa19.15■□□□□ 0.66
HLA-DPA1-245ENST00000463066 TNFAIP2Q03169 654 aa19.15■□□□□ 0.66
HLA-DPA1-245ENST00000463066 TRIM22Q8IYM9 498 aa19.15■□□□□ 0.66
HLA-DPA1-245ENST00000463066 SAMD3Q8N6K7 520 aa19.15■□□□□ 0.66
HLA-DPA1-245ENST00000463066 COPS5Q92905 334 aa19.15■□□□□ 0.66
HLA-DPA1-245ENST00000463066 PAWRQ96IZ0 340 aaKnown RBP19.15■□□□□ 0.66
HLA-DPA1-245ENST00000463066 RIC8AQ9NPQ8 531 aa19.15■□□□□ 0.66
HLA-DPA1-245ENST00000463066 GJB4Q9NTQ9 266 aa19.15■□□□□ 0.66
HLA-DPA1-245ENST00000463066 LOC102724159A0A0B4J2E5 919 aa19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 hCG_1984214I3L0E3 225 aa19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 ADAMTS4O75173 837 aa19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 RGS20O76081 388 aa19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 ARIH2O95376 493 aa19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 PWP2Q15269 919 aaKnown RBP19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 LRRC41Q15345 812 aa19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 CPLX2Q6PUV4 134 aaKnown RBP19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 SEPT14Q6ZU15 432 aa19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 CCDC83Q8IWF9 413 aa19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 ZNF713Q8N859 430 aaPredicted RBP19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 NSUN7Q8NE18 718 aaKnown RBP19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 IWS1Q96ST2 819 aa19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 RBM27Q9P2N5 1060 aaKnown RBP19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 FRMPD4Q14CM0 1322 aa19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 SYNRGQ9UMZ2 1314 aa19.14■□□□□ 0.65
HLA-DPA1-245ENST00000463066 RBM47A0AV96 593 aaKnown RBP19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 DEXIO95424 95 aa19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 FDPSP14324 419 aaKnown RBP19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 MRPL12P52815 198 aaKnown RBP19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 MRPS9P82933 396 aaKnown RBP19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 STXBP2Q15833 593 aa19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 JAKMIP3Q5VZ66 844 aa19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 VSIG10LQ86VR7 867 aa19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 RASGRP4Q8TDF6 673 aa19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 MPHOSPH6Q99547 160 aaKnown RBP19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 WDR11Q9BZH6 1224 aa19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 PCDHA6Q9UN73 950 aa19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 GNEQ9Y223 722 aaKnown RBP19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 PCDHA8Q9Y5H6 950 aa19.13■□□□□ 0.65
HLA-DPA1-245ENST00000463066 CTAGE5O15320 804 aa19.12■□□□□ 0.65
HLA-DPA1-245ENST00000463066 DYNC1LI2O43237 492 aaPredicted RBP19.12■□□□□ 0.65
HLA-DPA1-245ENST00000463066 DUSP11O75319 330 aaKnown RBP19.12■□□□□ 0.65
HLA-DPA1-245ENST00000463066 BEX3Q00994 111 aa19.12■□□□□ 0.65
HLA-DPA1-245ENST00000463066 IQSEC1Q6DN90 963 aa19.12■□□□□ 0.65
HLA-DPA1-245ENST00000463066 RTEL1Q9NZ71 1219 aa19.12■□□□□ 0.65
HLA-DPA1-245ENST00000463066 ORC3Q9UBD5 711 aaPredicted RBP19.12■□□□□ 0.65
HLA-DPA1-245ENST00000463066 ESYT2A0FGR8 921 aa19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 B4DLN1 442 aa19.11■□□□□ 0.65
HLA-DPA1-245ENST00000463066 SORBS3O60504 671 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms