RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 BMP1P13497 986 aa9.53□□□□□ -0.88
GARNL3-212ENST00000463005 CCDC85BQ15834 202 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-212ENST00000463005 CCDC144BQ3MJ40 725 aa9.53□□□□□ -0.88
GARNL3-212ENST00000463005 PTCRAQ6ISU1 281 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-212ENST00000463005 CLEC10AQ8IUN9 316 aa9.53□□□□□ -0.88
GARNL3-212ENST00000463005 RPUSD2Q8IZ73 545 aaKnown RBP9.53□□□□□ -0.88
GARNL3-212ENST00000463005 CLASRPQ8N2M8 674 aaKnown RBP9.53□□□□□ -0.88
GARNL3-212ENST00000463005 LENG1Q96BZ8 264 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-212ENST00000463005 SLF1Q9BQI6 1058 aa9.53□□□□□ -0.88
GARNL3-212ENST00000463005 FBXO40Q9UH90 709 aa9.53□□□□□ -0.88
GARNL3-212ENST00000463005 CTDP1Q9Y5B0 961 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-212ENST00000463005 CDH23Q9H251 3354 aa9.53□□□□□ -0.88
GARNL3-212ENST00000463005 MYH4Q9Y623 1939 aa9.52□□□□□ -0.88
GARNL3-212ENST00000463005 MYADML2A6NDP7 307 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 USP17L12C9JPN9 530 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 USP17L21D6R901 530 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 GOLIM4O00461 696 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 ZBED4O75132 1171 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 MMP16P51512 607 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 FAM83BQ5T0W9 1011 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 C20orf194Q5TEA3 1177 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 SNRNP48Q6IEG0 339 aaKnown RBP9.52□□□□□ -0.89
GARNL3-212ENST00000463005 SLC43A3Q8NBI5 491 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 CHST13Q8NET6 341 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 PPP1R12CQ9BZL4 782 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.52□□□□□ -0.89
GARNL3-212ENST00000463005 NKX2-4Q9H2Z4 354 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 ARMT1Q9H993 441 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 NYAP2Q9P242 653 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 RAPGEFL1Q9UHV5 662 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 EXOC6BQ9Y2D4 811 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 RIPK3Q9Y572 518 aa9.52□□□□□ -0.89
GARNL3-212ENST00000463005 GREB1LQ9C091 1923 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-212ENST00000463005 F5H6K3 240 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 PRKAB2O43741 272 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 ZEB2O60315 1214 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 RLBP1P12271 317 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 POU3F3P20264 500 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-212ENST00000463005 CYP2C18P33260 490 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 ADD2P35612 726 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 OAZ1P54368 228 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 KLRC3Q07444 240 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 UBE3CQ15386 1083 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 CEP85Q6P2H3 762 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 CPXCR1Q8N123 301 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 ANKRD35Q8N283 1001 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 RHPN1Q8TCX5 695 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 KIF1BPQ96EK5 621 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 DNAJC2Q99543 621 aaKnown RBP9.51□□□□□ -0.89
GARNL3-212ENST00000463005 OCSTAMPQ9BR26 566 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 HIPK3Q9H422 1215 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 PCDHA11Q9Y5I1 949 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 SLC4A7Q9Y6M7 1214 aa9.51□□□□□ -0.89
GARNL3-212ENST00000463005 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.5□□□□□ -0.89
GARNL3-212ENST00000463005 ERC2O15083 957 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 CTAGE5O15320 804 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 MBD4O95243 580 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 S1PR4O95977 384 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 IFIT2P09913 472 aaKnown RBP9.5□□□□□ -0.89
GARNL3-212ENST00000463005 TNFAIP2Q03169 654 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 KCNH2Q12809 1159 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 ITGA7Q13683 1181 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 AAMPQ13685 434 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 ZSCAN25Q6NSZ9 544 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 CTR9Q6PD62 1173 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 ARMCX2Q7L311 632 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 OTOP2Q7RTS6 562 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 EXOC6Q8TAG9 804 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 IL1RAPL2Q9NP60 686 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 EVA1BQ9NVM1 165 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 PAG1Q9NWQ8 432 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 SYNPO2Q9UMS6 1093 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 COG5Q9UP83 839 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 YBX2Q9Y2T7 364 aaKnown RBP9.5□□□□□ -0.89
GARNL3-212ENST00000463005 Q9Y3F1 56 aa9.5□□□□□ -0.89
GARNL3-212ENST00000463005 CYP2D7A0A087X1C5 515 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 ASB14A6NK59 587 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 PIK3CDO00329 1044 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 ADCY6O43306 1168 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 PFKMP08237 780 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 NR1H3Q13133 447 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 SBK1Q52WX2 424 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 ERICH6BQ5W0A0 696 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 IQSEC1Q6DN90 963 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 CCDC144CPQ8IYA2 1237 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 MKL1Q969V6 931 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 SLC6A16Q9GZN6 736 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 KATNBL1Q9H079 304 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 AP5M1Q9H0R1 490 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 IL21Q9HBE4 155 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 MKNK2Q9HBH9 465 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 SLC38A10Q9HBR0 1119 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 ARPP21Q9UBL0 812 aaPredicted RBP9.49□□□□□ -0.89
GARNL3-212ENST00000463005 FEM1BQ9UK73 627 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 SLC4A4Q9Y6R1 1079 aa9.49□□□□□ -0.89
GARNL3-212ENST00000463005 PRRC2BQ5JSZ5 2229 aaKnown RBP9.48□□□□□ -0.89
GARNL3-212ENST00000463005 ZBBXA8MT70 800 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 RAB11FIP3O75154 756 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 NDUFB10O96000 172 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 SUPT20HL2P0C7V6 817 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms