RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 GAS2L1Q99501 681 aaPredicted RBP18.85■□□□□ 0.61
COL7A1-204ENST00000462475 KAT14Q9H8E8 782 aa18.85■□□□□ 0.61
COL7A1-204ENST00000462475 PRDM6Q9NQX0 595 aa18.85■□□□□ 0.61
COL7A1-204ENST00000462475 GPHNQ9NQX3 736 aaPredicted RBP18.85■□□□□ 0.61
COL7A1-204ENST00000462475 TTC28Q96AY4 2481 aa18.85■□□□□ 0.61
COL7A1-204ENST00000462475 MUC3AQ02505 3323 aa18.84■□□□□ 0.61
COL7A1-204ENST00000462475 RAD50Q92878 1312 aa18.84■□□□□ 0.61
COL7A1-204ENST00000462475 A6NJR5 290 aa18.84■□□□□ 0.61
COL7A1-204ENST00000462475 SUPT20HL2P0C7V6 817 aa18.84■□□□□ 0.61
COL7A1-204ENST00000462475 TXNP10599 105 aaKnown RBP18.84■□□□□ 0.61
COL7A1-204ENST00000462475 RABGGTBP53611 331 aa18.84■□□□□ 0.61
COL7A1-204ENST00000462475 NBPF20Q3BBV1 942 aa18.84■□□□□ 0.61
COL7A1-204ENST00000462475 RPUSD2Q8IZ73 545 aaKnown RBP18.84■□□□□ 0.61
COL7A1-204ENST00000462475 ADGRF4Q8IZF3 695 aa18.84■□□□□ 0.61
COL7A1-204ENST00000462475 RGS22Q8NE09 1264 aa18.84■□□□□ 0.61
COL7A1-204ENST00000462475 ANKS1AQ92625 1134 aa18.84■□□□□ 0.61
COL7A1-204ENST00000462475 ZSCAN10Q96SZ4 725 aaPredicted RBP18.84■□□□□ 0.61
COL7A1-204ENST00000462475 DSCC1Q9BVC3 393 aa18.84■□□□□ 0.61
COL7A1-204ENST00000462475 COL20A1Q9P218 1284 aa18.84■□□□□ 0.61
COL7A1-204ENST00000462475 ABCB11O95342 1321 aa18.83■□□□□ 0.61
COL7A1-204ENST00000462475 SCN10AQ9Y5Y9 1956 aa18.83■□□□□ 0.61
COL7A1-204ENST00000462475 ZBBXA8MT70 800 aa18.83■□□□□ 0.6
COL7A1-204ENST00000462475 NT5C2P49902 561 aa18.83■□□□□ 0.6
COL7A1-204ENST00000462475 TTLL4Q14679 1199 aa18.83■□□□□ 0.6
COL7A1-204ENST00000462475 ASPRV1Q53RT3 343 aa18.83■□□□□ 0.6
COL7A1-204ENST00000462475 BRDTQ58F21 947 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-204ENST00000462475 CCDC178Q5BJE1 867 aa18.83■□□□□ 0.6
COL7A1-204ENST00000462475 SYTL5Q8TDW5 730 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-204ENST00000462475 PPM1EQ8WY54 764 aa18.83■□□□□ 0.6
COL7A1-204ENST00000462475 IL25Q9H293 177 aa18.83■□□□□ 0.6
COL7A1-204ENST00000462475 SLC4A7Q9Y6M7 1214 aa18.83■□□□□ 0.6
COL7A1-204ENST00000462475 B4DLN1 442 aa18.82■□□□□ 0.6
COL7A1-204ENST00000462475 HIP1O00291 1037 aa18.82■□□□□ 0.6
COL7A1-204ENST00000462475 MYOGP15173 224 aa18.82■□□□□ 0.6
COL7A1-204ENST00000462475 MRPL12P52815 198 aaKnown RBP18.82■□□□□ 0.6
COL7A1-204ENST00000462475 IMMTQ16891 758 aaKnown RBP18.82■□□□□ 0.6
COL7A1-204ENST00000462475 QRICH1Q2TAL8 776 aa18.82■□□□□ 0.6
COL7A1-204ENST00000462475 NFRKBQ6P4R8 1299 aa18.82■□□□□ 0.6
COL7A1-204ENST00000462475 CCDC62Q6P9F0 684 aa18.82■□□□□ 0.6
COL7A1-204ENST00000462475 DEFB128Q7Z7B8 93 aa18.82■□□□□ 0.6
COL7A1-204ENST00000462475 TAAR1Q96RJ0 339 aa18.82■□□□□ 0.6
COL7A1-204ENST00000462475 SLC28A3Q9HAS3 691 aa18.82■□□□□ 0.6
COL7A1-204ENST00000462475 ZSWIM5Q9P217 1185 aa18.82■□□□□ 0.6
COL7A1-204ENST00000462475 KPNA6O60684 536 aa18.81■□□□□ 0.6
COL7A1-204ENST00000462475 SEPT14Q6ZU15 432 aa18.81■□□□□ 0.6
COL7A1-204ENST00000462475 JMJD4Q9H9V9 463 aa18.81■□□□□ 0.6
COL7A1-204ENST00000462475 GBF1Q92538 1859 aa18.8■□□□□ 0.6
COL7A1-204ENST00000462475 DHX16O60231 1041 aaKnown RBP18.8■□□□□ 0.6
COL7A1-204ENST00000462475 PFKMP08237 780 aa18.8■□□□□ 0.6
COL7A1-204ENST00000462475 PARP1P09874 1014 aaKnown RBP18.8■□□□□ 0.6
COL7A1-204ENST00000462475 ATP2A2P16615 1042 aaKnown RBP18.8■□□□□ 0.6
COL7A1-204ENST00000462475 CHMP4BP1P59074 171 aa18.8■□□□□ 0.6
COL7A1-204ENST00000462475 ARHGAP1Q07960 439 aa18.8■□□□□ 0.6
COL7A1-204ENST00000462475 LY6KQ17RY6 165 aa18.8■□□□□ 0.6
COL7A1-204ENST00000462475 TJAP1Q5JTD0 557 aa18.8■□□□□ 0.6
COL7A1-204ENST00000462475 NSUN6Q8TEA1 469 aaKnown RBP18.8■□□□□ 0.6
COL7A1-204ENST00000462475 AFG1LQ8WV93 481 aa18.8■□□□□ 0.6
COL7A1-204ENST00000462475 VAT1LQ9HCJ6 419 aa18.8■□□□□ 0.6
COL7A1-204ENST00000462475 PITPNM1O00562 1244 aa18.79■□□□□ 0.6
COL7A1-204ENST00000462475 MMP3P08254 477 aa18.79■□□□□ 0.6
COL7A1-204ENST00000462475 IGFBP4P22692 258 aa18.79■□□□□ 0.6
COL7A1-204ENST00000462475 PTPN11Q06124 597 aaPredicted RBP18.79■□□□□ 0.6
COL7A1-204ENST00000462475 PPP2R2DQ66LE6 453 aa18.79■□□□□ 0.6
COL7A1-204ENST00000462475 FBXO11Q86XK2 927 aa18.79■□□□□ 0.6
COL7A1-204ENST00000462475 MCF2L2Q86YR7 1114 aa18.79■□□□□ 0.6
COL7A1-204ENST00000462475 SYMPKQ92797 1274 aaKnown RBP18.79■□□□□ 0.6
COL7A1-204ENST00000462475 RMDN3Q96TC7 470 aa18.79■□□□□ 0.6
COL7A1-204ENST00000462475 UBAC1Q9BSL1 405 aa18.79■□□□□ 0.6
COL7A1-204ENST00000462475 KRT23Q9C075 422 aa18.79■□□□□ 0.6
COL7A1-204ENST00000462475 MAF1Q9H063 256 aa18.79■□□□□ 0.6
COL7A1-204ENST00000462475 CTNNA3Q9UI47 895 aa18.79■□□□□ 0.6
COL7A1-204ENST00000462475 MRPL11Q9Y3B7 192 aaKnown RBP18.79■□□□□ 0.6
COL7A1-204ENST00000462475 PCDHA11Q9Y5I1 949 aa18.79■□□□□ 0.6
COL7A1-204ENST00000462475 GH1P01241 217 aa18.78■□□□□ 0.6
COL7A1-204ENST00000462475 IQCF3P0C7M6 154 aa18.78■□□□□ 0.6
COL7A1-204ENST00000462475 EIF2AK2P19525 551 aaKnown RBP18.78■□□□□ 0.6
COL7A1-204ENST00000462475 CCDC85BQ15834 202 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-204ENST00000462475 CHST3Q7LGC8 479 aa18.78■□□□□ 0.6
COL7A1-204ENST00000462475 STAG2Q8N3U4 1231 aa18.78■□□□□ 0.6
COL7A1-204ENST00000462475 CNNM2Q9H8M5 875 aa18.78■□□□□ 0.6
COL7A1-204ENST00000462475 NOD1Q9Y239 953 aa18.78■□□□□ 0.6
COL7A1-204ENST00000462475 SCN5AQ14524 2016 aa18.78■□□□□ 0.6
COL7A1-204ENST00000462475 OPLAHO14841 1288 aa18.77■□□□□ 0.6
COL7A1-204ENST00000462475 GSPT1P15170 499 aaKnown RBP18.77■□□□□ 0.6
COL7A1-204ENST00000462475 RFC2P35250 354 aa18.77■□□□□ 0.6
COL7A1-204ENST00000462475 SEC23AQ15436 765 aa18.77■□□□□ 0.6
COL7A1-204ENST00000462475 STXBP2Q15833 593 aa18.77■□□□□ 0.6
COL7A1-204ENST00000462475 IFIT1BQ5T764 474 aaKnown RBP18.77■□□□□ 0.6
COL7A1-204ENST00000462475 ARHGEF16Q5VV41 709 aa18.77■□□□□ 0.6
COL7A1-204ENST00000462475 CYB5R4Q7L1T6 521 aa18.77■□□□□ 0.6
COL7A1-204ENST00000462475 KAT2BQ92831 832 aa18.77■□□□□ 0.6
COL7A1-204ENST00000462475 CTAGE1Q96RT6 745 aa18.77■□□□□ 0.6
COL7A1-204ENST00000462475 IWS1Q96ST2 819 aa18.77■□□□□ 0.6
COL7A1-204ENST00000462475 THEGQ9P2T0 379 aa18.77■□□□□ 0.6
COL7A1-204ENST00000462475 XIRP2A4UGR9 3374 aa18.77■□□□□ 0.6
COL7A1-204ENST00000462475 TANC1Q9C0D5 1861 aa18.77■□□□□ 0.6
COL7A1-204ENST00000462475 PPP1R11O60927 126 aaPredicted RBP18.76■□□□□ 0.59
COL7A1-204ENST00000462475 CFBP00751 764 aa18.76■□□□□ 0.59
COL7A1-204ENST00000462475 CA3P07451 260 aa18.76■□□□□ 0.59
COL7A1-204ENST00000462475 PDE4AP27815 886 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms