RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 ZEB2O60315 1214 aa21.86■■□□□ 1.09
SLC6A1-204ENST00000462473 PTGS1P23219 599 aa21.86■■□□□ 1.09
SLC6A1-204ENST00000462473 HSD17B4P51659 736 aa21.86■■□□□ 1.09
SLC6A1-204ENST00000462473 FGD1P98174 961 aa21.86■■□□□ 1.09
SLC6A1-204ENST00000462473 FSCN1Q16658 493 aaKnown RBP21.86■■□□□ 1.09
SLC6A1-204ENST00000462473 CMTR1Q8N1G2 835 aaKnown RBP21.86■■□□□ 1.09
SLC6A1-204ENST00000462473 SRBD1Q8N5C6 995 aaKnown RBP21.86■■□□□ 1.09
SLC6A1-204ENST00000462473 SCFD2Q8WU76 684 aa21.86■■□□□ 1.09
SLC6A1-204ENST00000462473 IWS1Q96ST2 819 aa21.86■■□□□ 1.09
SLC6A1-204ENST00000462473 GDF15Q99988 308 aa21.86■■□□□ 1.09
SLC6A1-204ENST00000462473 PRO3102Q9H379 93 aa21.86■■□□□ 1.09
SLC6A1-204ENST00000462473 PRDM5Q9NQX1 630 aaPredicted RBP21.86■■□□□ 1.09
SLC6A1-204ENST00000462473 ELP1O95163 1332 aa21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 CEP290O15078 2479 aa21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 GCOM1H8Y6P7 765 aaPredicted RBP21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 POLR2MP0CAP2 368 aa21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 EIF2AK2P19525 551 aaKnown RBP21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 HOXA13P31271 388 aaPredicted RBP21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 MAGEA10P43363 369 aaPredicted RBP21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 GHRHRQ02643 423 aa21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 TLE2Q04725 743 aa21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 PPP2R5BQ15173 497 aa21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 STXBP2Q15833 593 aa21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 JAKMIP1Q96N16 626 aaKnown RBP21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 PCDH10Q9P2E7 1040 aa21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 SNX14Q9Y5W7 946 aa21.85■■□□□ 1.09
SLC6A1-204ENST00000462473 BAZ2BQ9UIF8 2168 aaKnown RBP21.84■■□□□ 1.09
SLC6A1-204ENST00000462473 LRRC37A2A6NM11 1700 aa21.84■■□□□ 1.09
SLC6A1-204ENST00000462473 MDM2Q00987 491 aaPredicted RBP21.84■■□□□ 1.09
SLC6A1-204ENST00000462473 TTLL4Q14679 1199 aa21.84■■□□□ 1.09
SLC6A1-204ENST00000462473 APOA5Q6Q788 366 aa21.84■■□□□ 1.09
SLC6A1-204ENST00000462473 SEPT14Q6ZU15 432 aa21.84■■□□□ 1.09
SLC6A1-204ENST00000462473 CCDC82Q8N4S0 544 aa21.84■■□□□ 1.09
SLC6A1-204ENST00000462473 LBHD1Q9BQE6 289 aaPredicted RBP21.84■■□□□ 1.09
SLC6A1-204ENST00000462473 PXMP2Q9NR77 195 aa21.84■■□□□ 1.09
SLC6A1-204ENST00000462473 NKRFO15226 690 aaKnown RBP eCLIP21.83■■□□□ 1.09
SLC6A1-204ENST00000462473 PQBP1O60828 265 aaKnown RBP21.83■■□□□ 1.09
SLC6A1-204ENST00000462473 NR3C2P08235 984 aa21.83■■□□□ 1.09
SLC6A1-204ENST00000462473 TXNP10599 105 aaKnown RBP21.83■■□□□ 1.09
SLC6A1-204ENST00000462473 CPA1P15085 419 aa21.83■■□□□ 1.09
SLC6A1-204ENST00000462473 BMP8BP34820 402 aa21.83■■□□□ 1.09
SLC6A1-204ENST00000462473 BLOC1S2Q6QNY1 142 aa21.83■■□□□ 1.09
SLC6A1-204ENST00000462473 CXCL17Q6UXB2 119 aa21.83■■□□□ 1.09
SLC6A1-204ENST00000462473 OR6J1Q8NGC5 347 aa21.83■■□□□ 1.09
SLC6A1-204ENST00000462473 RBM28Q9NW13 759 aaKnown RBP21.83■■□□□ 1.09
SLC6A1-204ENST00000462473 BRPF3Q9ULD4 1205 aa21.83■■□□□ 1.09
SLC6A1-204ENST00000462473 A0A0U1RQG5 324 aaPredicted RBP21.82■■□□□ 1.08
SLC6A1-204ENST00000462473 DCDC2CA8MYV0 355 aa21.82■■□□□ 1.08
SLC6A1-204ENST00000462473 ZBTB43O43298 467 aa21.82■■□□□ 1.08
SLC6A1-204ENST00000462473 EPB41L2O43491 1005 aaKnown RBP21.82■■□□□ 1.08
SLC6A1-204ENST00000462473 CABYRO75952 493 aa21.82■■□□□ 1.08
SLC6A1-204ENST00000462473 PSMA5P28066 241 aa21.82■■□□□ 1.08
SLC6A1-204ENST00000462473 TMTC3Q6ZXV5 915 aa21.82■■□□□ 1.08
SLC6A1-204ENST00000462473 FCHSD1Q86WN1 690 aa21.82■■□□□ 1.08
SLC6A1-204ENST00000462473 UBE2OQ9C0C9 1292 aaKnown RBP21.82■■□□□ 1.08
SLC6A1-204ENST00000462473 PDLIM7Q9NR12 457 aa21.82■■□□□ 1.08
SLC6A1-204ENST00000462473 NAP1L2Q9ULW6 460 aaPredicted RBP21.82■■□□□ 1.08
SLC6A1-204ENST00000462473 KLF18A0A0U1RQI7 1052 aa21.81■■□□□ 1.08
SLC6A1-204ENST00000462473 A0A1W2PPC1 479 aa21.81■■□□□ 1.08
SLC6A1-204ENST00000462473 EIF3JO75822 258 aaKnown RBP21.81■■□□□ 1.08
SLC6A1-204ENST00000462473 CLTBP09497 229 aa21.81■■□□□ 1.08
SLC6A1-204ENST00000462473 MYCLP12524 364 aaPredicted RBP21.81■■□□□ 1.08
SLC6A1-204ENST00000462473 CPT1AP50416 773 aa21.81■■□□□ 1.08
SLC6A1-204ENST00000462473 BRDTQ58F21 947 aaPredicted RBP21.81■■□□□ 1.08
SLC6A1-204ENST00000462473 Q6ZUG5 572 aa21.81■■□□□ 1.08
SLC6A1-204ENST00000462473 ANKRD33Q7Z3H0 272 aa21.81■■□□□ 1.08
SLC6A1-204ENST00000462473 COPS5Q92905 334 aa21.81■■□□□ 1.08
SLC6A1-204ENST00000462473 TOX2Q96NM4 488 aa21.81■■□□□ 1.08
SLC6A1-204ENST00000462473 PDCD2LQ9BRP1 358 aa21.81■■□□□ 1.08
SLC6A1-204ENST00000462473 MROH7Q68CQ1 1323 aa21.8■■□□□ 1.08
SLC6A1-204ENST00000462473 ARVCFO00192 962 aa21.8■■□□□ 1.08
SLC6A1-204ENST00000462473 PGM5Q15124 567 aa21.8■■□□□ 1.08
SLC6A1-204ENST00000462473 RTN1Q16799 776 aa21.8■■□□□ 1.08
SLC6A1-204ENST00000462473 SH3RF1Q7Z6J0 888 aa21.8■■□□□ 1.08
SLC6A1-204ENST00000462473 CUL5Q93034 780 aa21.8■■□□□ 1.08
SLC6A1-204ENST00000462473 hCG_1642624A0A1W2PR95 340 aa21.79■■□□□ 1.08
SLC6A1-204ENST00000462473 TRIM43BA6NCK2 446 aa21.79■■□□□ 1.08
SLC6A1-204ENST00000462473 GOLGA8AA7E2F4 631 aa21.79■■□□□ 1.08
SLC6A1-204ENST00000462473 GOLGA8BA8MQT2 603 aa21.79■■□□□ 1.08
SLC6A1-204ENST00000462473 ARIH2O95376 493 aa21.79■■□□□ 1.08
SLC6A1-204ENST00000462473 CDK7P50613 346 aa21.79■■□□□ 1.08
SLC6A1-204ENST00000462473 SMARCC2Q8TAQ2 1214 aa21.79■■□□□ 1.08
SLC6A1-204ENST00000462473 TRIM43Q96BQ3 446 aaPredicted RBP21.79■■□□□ 1.08
SLC6A1-204ENST00000462473 USP26Q9BXU7 913 aa21.79■■□□□ 1.08
SLC6A1-204ENST00000462473 TMEM39AQ9NV64 488 aa21.79■■□□□ 1.08
SLC6A1-204ENST00000462473 POLR3EQ9NVU0 708 aa21.79■■□□□ 1.08
SLC6A1-204ENST00000462473 MYL3P08590 195 aa21.78■■□□□ 1.08
SLC6A1-204ENST00000462473 CASTP20810 708 aaKnown RBP21.78■■□□□ 1.08
SLC6A1-204ENST00000462473 RPS6KB1P23443 525 aa21.78■■□□□ 1.08
SLC6A1-204ENST00000462473 FXR1P51114 621 aaKnown RBP eCLIP21.78■■□□□ 1.08
SLC6A1-204ENST00000462473 APOBRQ0VD83 1088 aa21.78■■□□□ 1.08
SLC6A1-204ENST00000462473 FAAP100Q0VG06 881 aa21.78■■□□□ 1.08
SLC6A1-204ENST00000462473 LY6KQ17RY6 165 aa21.78■■□□□ 1.08
SLC6A1-204ENST00000462473 CCDC62Q6P9F0 684 aa21.78■■□□□ 1.08
SLC6A1-204ENST00000462473 BRF1Q92994 677 aa21.78■■□□□ 1.08
SLC6A1-204ENST00000462473 TLR3O15455 904 aaKnown RBP21.77■■□□□ 1.08
SLC6A1-204ENST00000462473 GH1P01241 217 aa21.77■■□□□ 1.08
SLC6A1-204ENST00000462473 CCND2P30279 289 aa21.77■■□□□ 1.08
SLC6A1-204ENST00000462473 RCAN1P53805 252 aa21.77■■□□□ 1.08
SLC6A1-204ENST00000462473 ITGA7Q13683 1181 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms