RNA–Protein interactions for RNA: ENST00000462260.1

PCOLCE-203, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-203ENST00000462260 TIMP1P01033 207 aa15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 CD4P01730 458 aa15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 MCM5P33992 734 aa15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 ITGA7Q13683 1181 aa15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 COL9A3Q14050 684 aaPredicted RBP15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 C9orf50Q5SZB4 431 aa15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 CASC1Q6TDU7 716 aa15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 HOMER1Q86YM7 354 aa15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 SAMD3Q8N6K7 520 aa15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 PIGSQ96S52 555 aa15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 IWS1Q96ST2 819 aa15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 MAP3K14Q99558 947 aa15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 SEZ6LQ9BYH1 1024 aa15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 GPHNQ9NQX3 736 aaPredicted RBP15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 PCDHA1Q9Y5I3 950 aa15.93■□□□□ 0.14
PCOLCE-203ENST00000462260 PRC1O43663 620 aa15.92■□□□□ 0.14
PCOLCE-203ENST00000462260 ARIH2O95376 493 aa15.92■□□□□ 0.14
PCOLCE-203ENST00000462260 CPT1AP50416 773 aa15.92■□□□□ 0.14
PCOLCE-203ENST00000462260 PURAQ00577 322 aaKnown RBP15.92■□□□□ 0.14
PCOLCE-203ENST00000462260 TTLL4Q14679 1199 aa15.92■□□□□ 0.14
PCOLCE-203ENST00000462260 CCDC62Q6P9F0 684 aa15.92■□□□□ 0.14
PCOLCE-203ENST00000462260 ZNF654Q8IZM8 581 aa15.92■□□□□ 0.14
PCOLCE-203ENST00000462260 OR6J1Q8NGC5 347 aa15.92■□□□□ 0.14
PCOLCE-203ENST00000462260 TMEM87BQ96K49 555 aa15.92■□□□□ 0.14
PCOLCE-203ENST00000462260 MAP3K20Q9NYL2 800 aaKnown RBP15.92■□□□□ 0.14
PCOLCE-203ENST00000462260 PNMA6FA0A0J9YX94 578 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 A6NJR5 290 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 SH2B2O14492 632 aaPredicted RBP15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 TLR3O15455 904 aaKnown RBP15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 DDAH1O94760 285 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 TXNP10599 105 aaKnown RBP15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 LIFRP42702 1097 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 EPHB4P54760 987 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 FPGSQ05932 587 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 TRAF1Q13077 416 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 STXBP2Q15833 593 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 ARHGEF16Q5VV41 709 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 MFSD5Q6N075 450 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 TMTC2Q8N394 836 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 COPS5Q92905 334 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 MYL10Q9BUA6 226 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 PXMP2Q9NR77 195 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 POLR3EQ9NVU0 708 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 KIAA1217Q5T5P2 1943 aa15.91■□□□□ 0.14
PCOLCE-203ENST00000462260 SCN10AQ9Y5Y9 1956 aa15.9■□□□□ 0.14
PCOLCE-203ENST00000462260 NR3C2P08235 984 aa15.9■□□□□ 0.14
PCOLCE-203ENST00000462260 EIF2AK2P19525 551 aaKnown RBP15.9■□□□□ 0.14
PCOLCE-203ENST00000462260 PSMC6P62333 389 aa15.9■□□□□ 0.14
PCOLCE-203ENST00000462260 SEPT14Q6ZU15 432 aa15.9■□□□□ 0.14
PCOLCE-203ENST00000462260 DEFB123Q8N688 67 aa15.9■□□□□ 0.14
PCOLCE-203ENST00000462260 CCDC136Q96JN2 1154 aa15.9■□□□□ 0.14
PCOLCE-203ENST00000462260 SPZ1Q9BXG8 430 aa15.9■□□□□ 0.14
PCOLCE-203ENST00000462260 CDC45O75419 566 aa15.89■□□□□ 0.13
PCOLCE-203ENST00000462260 EIF3JO75822 258 aaKnown RBP15.89■□□□□ 0.13
PCOLCE-203ENST00000462260 SMARCA1P28370 1054 aa15.89■□□□□ 0.13
PCOLCE-203ENST00000462260 HOXA13P31271 388 aaPredicted RBP15.89■□□□□ 0.13
PCOLCE-203ENST00000462260 KIF5BP33176 963 aa15.89■□□□□ 0.13
PCOLCE-203ENST00000462260 LY6KQ17RY6 165 aa15.89■□□□□ 0.13
PCOLCE-203ENST00000462260 BRDTQ58F21 947 aaPredicted RBP15.89■□□□□ 0.13
PCOLCE-203ENST00000462260 RNF20Q5VTR2 975 aa15.89■□□□□ 0.13
PCOLCE-203ENST00000462260 CTCFLQ8NI51 663 aaPredicted RBP15.89■□□□□ 0.13
PCOLCE-203ENST00000462260 PDCD2LQ9BRP1 358 aa15.89■□□□□ 0.13
PCOLCE-203ENST00000462260 MTG1Q9BT17 334 aaPredicted RBP15.89■□□□□ 0.13
PCOLCE-203ENST00000462260 CCDC69A6NI79 296 aa15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 GCOM1H8Y6P7 765 aaPredicted RBP15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 B4GALT4O60513 344 aa15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 KPNA6O60684 536 aa15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 MYL3P08590 195 aa15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 POLR2MP0CAP2 368 aa15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 GNAQP50148 359 aa15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 FAM109BQ6ICB4 259 aaPredicted RBP15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 NFXL1Q6ZNB6 911 aa15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 Q7L0L9 218 aa15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 SGMS1Q86VZ5 419 aa15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 LZTS2Q9BRK4 669 aa15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 TRPV6Q9H1D0 765 aa15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 ALDH8A1Q9H2A2 487 aaPredicted RBP15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 MTMR10Q9NXD2 777 aa15.88■□□□□ 0.13
PCOLCE-203ENST00000462260 COL6A3P12111 3177 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 GH1P01241 217 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 CALM1P0DP23 149 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 CALM2P0DP24 149 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 CALM3P0DP25 149 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 ARHGAP1Q07960 439 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 PPIGQ13427 754 aaKnown RBP eCLIP15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 PGM5Q15124 567 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 TSGA10IPQ3SY00 556 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 VSIG10LQ86VR7 867 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 TMEM199Q8N511 208 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 SRBD1Q8N5C6 995 aaKnown RBP15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 RRP36Q96EU6 259 aaKnown RBP15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 RNPC3Q96LT9 517 aaKnown RBP15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 NEK1Q96PY6 1258 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 LRRC2Q9BYS8 371 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 PPP1R12CQ9BZL4 782 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 HIPK3Q9H422 1215 aa15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 DDX41Q9UJV9 622 aaKnown RBP15.87■□□□□ 0.13
PCOLCE-203ENST00000462260 RGS20O76081 388 aa15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 PLEKHA8P1O95397 391 aa15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 CSF2RAP15509 400 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms