RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 TAL1P17542 331 aaPredicted RBP7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 PHKA1P46020 1223 aa7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 NR1H3Q13133 447 aa7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 ZYXQ15942 572 aaKnown RBP7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 TTC39AQ5SRH9 613 aa7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 CCDC102BQ68D86 513 aa7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 CCSAPQ6IQ19 270 aaPredicted RBP7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 PTCRAQ6ISU1 281 aaPredicted RBP7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 LBX2Q6XYB7 198 aa7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 LIAT1Q6ZQX7 453 aa7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 DZIP1Q86YF9 867 aaKnown RBP7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 FOXP4Q8IVH2 680 aaPredicted RBP7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 RPUSD2Q8IZ73 545 aaKnown RBP7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 ZGPATQ8N5A5 531 aaKnown RBP7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 KLHDC9Q8NEP7 349 aa7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 MAML3Q96JK9 1138 aa7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 GLT1D1Q96MS3 346 aa7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 MOV10L1Q9BXT6 1211 aaKnown RBP7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 UBE2ZQ9H832 354 aaPredicted RBP7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 ABCF2Q9UG63 623 aa7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 NRBP1Q9UHY1 535 aa7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 DBNLQ9UJU6 430 aaKnown RBP7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 BAHCC1Q9P281 2608 aa7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 EPG5Q9HCE0 2579 aa7.12□□□□□ -1.27
SMARCC1-204ENST00000462198 FAM186AA6NE01 2351 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 C5orf42Q9H799 3197 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 MROH7-TTC4A0A0A0MT08 1334 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 PIK3CDO00329 1044 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 LPXNO60711 386 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 GDF11O95390 407 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 CD4P01730 458 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 HMGB1P09429 215 aaKnown RBP7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 CDK11BP21127 795 aaKnown RBP7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 KCNA5P22460 613 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 CCL23P55773 120 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 TAP1Q03518 808 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 TCF15Q12870 199 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 SWT1Q5T5J6 900 aaKnown RBP7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 SPTY2D1Q68D10 685 aaPredicted RBP7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 FAM126BQ8IXS8 530 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 SMC5Q8IY18 1101 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 LENG1Q96BZ8 264 aaPredicted RBP7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 GPATCH3Q96I76 525 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 PRRX2Q99811 253 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 GINM1Q9NU53 330 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 FAM86C1Q9NVL1 165 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 TLR7Q9NYK1 1049 aaKnown RBP7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 LMCD1Q9NZU5 365 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 NOVA2Q9UNW9 492 aaKnown RBP7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 WDR87Q6ZQQ6 2873 aa7.11□□□□□ -1.27
SMARCC1-204ENST00000462198 TECTAO75443 2155 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 KMT2BQ9UMN6 2715 aaPredicted RBP7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 CACNA1HO95180 2353 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 UMODL1Q5DID0 1318 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 ARHGEF15O94989 841 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 MAP4K4O95819 1239 aaPredicted RBP7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 ASGR1P07306 291 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 LDHCP07864 332 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 FBXO45P0C2W1 286 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 ZNF865P0CJ78 1059 aaPredicted RBP7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 AKR1A1P14550 325 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 ARID4AP29374 1257 aaPredicted RBP7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 ID4P47928 161 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 MECOMQ03112 1051 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 FUT2Q10981 343 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 RASGRF1Q13972 1273 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 DESI1Q6ICB0 168 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 SPATA5Q8NB90 893 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 SHCBP1Q8NEM2 672 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 C12orf42Q96LP6 360 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 FEZ1Q99689 392 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 TINF2Q9BSI4 451 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 UPF3BQ9BZI7 483 aaKnown RBP7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 LNPKQ9C0E8 428 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 SPATC1LQ9H0A9 340 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 DHX36Q9H2U1 1008 aaKnown RBP7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 HIPK3Q9H422 1215 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 MROH8Q9H579 483 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 HOXC10Q9NYD6 342 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 PRDM4Q9UKN5 801 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 BRPF3Q9ULD4 1205 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 ZBTB21Q9ULJ3 1066 aa7.1□□□□□ -1.27
SMARCC1-204ENST00000462198 ZNF536O15090 1300 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 SYNRGQ9UMZ2 1314 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 ZNF236Q9UL36 1845 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 MYADML2A6NDP7 307 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 KIF28PB7ZC32 967 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 FCER1AP12319 257 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 VCAM1P19320 739 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 MCAMP43121 646 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 USP14P54578 494 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 NUCB1Q02818 461 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 PLS1Q14651 629 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 TTLL4Q14679 1199 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 COG2Q14746 738 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 PUS10Q3MIT2 529 aaKnown RBP7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 LCE2CQ5TA81 110 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 TAF3Q5VWG9 929 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 BMP8AQ7Z5Y6 402 aa7.09□□□□□ -1.27
SMARCC1-204ENST00000462198 MTERF4Q7Z6M4 381 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms