RNA–Protein interactions for RNA: ENST00000462135.1

STX1A-206, Transcript of syntaxin 1A, human

TSL 3

Gene STX1A, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STX1A-206	ENST00000462135	EDIL3	O43854	480 aa		13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	CCL15	Q16663	113 aa		13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	CAVIN1	Q6NZI2	390 aa	Known RBP	13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	SHC4	Q6S5L8	630 aa		13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	DTHD1	Q6ZMT9	781 aa		13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	RNF207	Q6ZRF8	634 aa		13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	NIPA1	Q7RTP0	329 aa		13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	BRI3BP	Q8WY22	251 aa		13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	CCDC102A	Q96A19	550 aa		13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	RAB34	Q9BZG1	259 aa		13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	SPATC1L	Q9H0A9	340 aa		13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	DDX25	Q9UHL0	483 aa	Known RBP	13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	USP25	Q9UHP3	1055 aa		13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	TLL2	Q9Y6L7	1015 aa		13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.63	□□□□□ -0.23
STX1A-206	ENST00000462135	KIN	O60870	393 aa	Known RBP	13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	PFKFB1	P16118	471 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	LIG1	P18858	919 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	HOXA13	P31271	388 aa	Predicted RBP	13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	FXR2	P51116	673 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	ZNF445	P59923	1031 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	RPS6	P62753	249 aa	Known RBP	13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	SET	Q01105	290 aa	Predicted RBP	13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	SNW1	Q13573	536 aa	Known RBP	13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	PDIA5	Q14554	519 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	CALCRL	Q16602	461 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	RGMB	Q6NW40	437 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	RASAL3	Q86YV0	1011 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	SLFN12	Q8IYM2	578 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	FAM20A	Q96MK3	541 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	CLSTN2	Q9H4D0	955 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	KCNMB3	Q9NPA1	279 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	DACT1	Q9NYF0	836 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	TMEM63C	Q9P1W3	806 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	STK24	Q9Y6E0	443 aa		13.62	□□□□□ -0.23
STX1A-206	ENST00000462135	LOC102724159	A0A0B4J2E5	919 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	BTBD19	C9JJ37	291 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	STAM2	O75886	525 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	TDP2	O95551	362 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	SLC10A3	P09131	477 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	BCR	P11274	1271 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	TXLNA	P40222	546 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	SYK	P43405	635 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	CCNA1	P78396	465 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	PWP2	Q15269	919 aa	Known RBP	13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	TMEM266	Q2M3C6	531 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	MUM1L1	Q5H9M0	696 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	PCNX4	Q63HM2	1172 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	RBM43	Q6ZSC3	357 aa	Known RBP	13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	CCDC34	Q96HJ3	373 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	PARK7	Q99497	189 aa	Known RBP	13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	CSRNP2	Q9H175	543 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	NUP62CL	Q9H1M0	184 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	TMEM60	Q9H2L4	133 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	GOLPH3L	Q9H4A5	285 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	MROH8	Q9H579	483 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	BTBD7	Q9P203	1132 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	MORF4L1	Q9UBU8	362 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	KCNH3	Q9ULD8	1083 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	RIPK3	Q9Y572	518 aa		13.61	□□□□□ -0.23
STX1A-206	ENST00000462135	VWA3A	A6NCI4	1184 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	TMEM88B	A6NKF7	163 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	PDHX	O00330	501 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	NR1I2	O75469	434 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	CNMD	O75829	334 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	TAL1	P17542	331 aa	Predicted RBP	13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	ZNF157	P51786	506 aa	Predicted RBP	13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	NDUFA8	P51970	172 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	ZSCAN23	Q3MJ62	389 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	KANK3	Q6NY19	840 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	POTEE	Q6S8J3	1075 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	FCHSD1	Q86WN1	690 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	IGSF22	Q8N9C0	903 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	DNER	Q8NFT8	737 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	TBC1D5	Q92609	795 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	LENG9	Q96B70	501 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	CLIC6	Q96NY7	704 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	CCSER1	Q9C0I3	900 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	A1CF	Q9NQ94	594 aa	Known RBP	13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	CYP39A1	Q9NYL5	469 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	RBPJL	Q9UBG7	517 aa		13.6	□□□□□ -0.23
STX1A-206	ENST00000462135	IGLV3-22	A0A075B6J6	115 aa		13.59	□□□□□ -0.23
STX1A-206	ENST00000462135		A0A1B0GVL5	298 aa		13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	MEIS1	O00470	390 aa		13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	SLC37A4	O43826	429 aa		13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	ZNF76	P36508	570 aa		13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	BAAT	Q14032	418 aa	Predicted RBP	13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	PLS1	Q14651	629 aa		13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	IL17A	Q16552	155 aa		13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	CEP55	Q53EZ4	464 aa		13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	NSMF	Q6X4W1	530 aa		13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	SLC30A10	Q6XR72	485 aa		13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	POTED	Q86YR6	584 aa		13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	KCTD17	Q8N5Z5	321 aa		13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	ETNPPL	Q8TBG4	499 aa		13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	NSUN6	Q8TEA1	469 aa	Known RBP	13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.59	□□□□□ -0.23
STX1A-206	ENST00000462135	IWS1	Q96ST2	819 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms