RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 MB21D2Q8IYB1 491 aaPredicted RBP16.21■□□□□ 0.19
USP4-206ENST00000461553 TMEM199Q8N511 208 aa16.21■□□□□ 0.19
USP4-206ENST00000461553 SLC43A3Q8NBI5 491 aa16.21■□□□□ 0.19
USP4-206ENST00000461553 RMDN3Q96TC7 470 aa16.21■□□□□ 0.19
USP4-206ENST00000461553 GPHNQ9NQX3 736 aaPredicted RBP16.21■□□□□ 0.19
USP4-206ENST00000461553 COL20A1Q9P218 1284 aa16.21■□□□□ 0.19
USP4-206ENST00000461553 TAF6LQ9Y6J9 622 aa16.21■□□□□ 0.19
USP4-206ENST00000461553 SCN5AQ14524 2016 aa16.2■□□□□ 0.18
USP4-206ENST00000461553 CD4P01730 458 aa16.2■□□□□ 0.18
USP4-206ENST00000461553 TXNP10599 105 aaKnown RBP16.2■□□□□ 0.18
USP4-206ENST00000461553 EPHB4P54760 987 aa16.2■□□□□ 0.18
USP4-206ENST00000461553 SMAD3P84022 425 aaKnown RBP16.2■□□□□ 0.18
USP4-206ENST00000461553 PURAQ00577 322 aaKnown RBP16.2■□□□□ 0.18
USP4-206ENST00000461553 ARHGEF16Q5VV41 709 aa16.2■□□□□ 0.18
USP4-206ENST00000461553 FAM109BQ6ICB4 259 aaPredicted RBP16.2■□□□□ 0.18
USP4-206ENST00000461553 TBC1D5Q92609 795 aa16.2■□□□□ 0.18
USP4-206ENST00000461553 MTMR8Q96EF0 704 aa16.2■□□□□ 0.18
USP4-206ENST00000461553 TAAR1Q96RJ0 339 aa16.2■□□□□ 0.18
USP4-206ENST00000461553 IWS1Q96ST2 819 aa16.2■□□□□ 0.18
USP4-206ENST00000461553 ESYT1Q9BSJ8 1104 aa16.2■□□□□ 0.18
USP4-206ENST00000461553 MTG1Q9BT17 334 aaPredicted RBP16.2■□□□□ 0.18
USP4-206ENST00000461553 MTMR10Q9NXD2 777 aa16.2■□□□□ 0.18
USP4-206ENST00000461553 TRIP12Q14669 1992 aaPredicted RBP16.2■□□□□ 0.18
USP4-206ENST00000461553 MYO9BQ13459 2157 aa16.19■□□□□ 0.18
USP4-206ENST00000461553 DOCK5Q9H7D0 1870 aa16.19■□□□□ 0.18
USP4-206ENST00000461553 B4GALT4O60513 344 aa16.19■□□□□ 0.18
USP4-206ENST00000461553 EIF2AK2P19525 551 aaKnown RBP16.19■□□□□ 0.18
USP4-206ENST00000461553 ANTXR2P58335 489 aa16.19■□□□□ 0.18
USP4-206ENST00000461553 STXBP2Q15833 593 aa16.19■□□□□ 0.18
USP4-206ENST00000461553 PSRC1Q6PGN9 363 aaPredicted RBP16.19■□□□□ 0.18
USP4-206ENST00000461553 SEPT14Q6ZU15 432 aa16.19■□□□□ 0.18
USP4-206ENST00000461553 COPS5Q92905 334 aa16.19■□□□□ 0.18
USP4-206ENST00000461553 LSG1Q9H089 658 aaKnown RBP16.19■□□□□ 0.18
USP4-206ENST00000461553 HIPK3Q9H422 1215 aa16.19■□□□□ 0.18
USP4-206ENST00000461553 SENP2Q9HC62 589 aa16.19■□□□□ 0.18
USP4-206ENST00000461553 ANO2Q9NQ90 1003 aa16.19■□□□□ 0.18
USP4-206ENST00000461553 PXMP2Q9NR77 195 aa16.19■□□□□ 0.18
USP4-206ENST00000461553 PCDHA1Q9Y5I3 950 aa16.19■□□□□ 0.18
USP4-206ENST00000461553 GRIN2DO15399 1336 aa16.19■□□□□ 0.18
USP4-206ENST00000461553 KPNA6O60684 536 aa16.18■□□□□ 0.18
USP4-206ENST00000461553 PPP1R11O60927 126 aaPredicted RBP16.18■□□□□ 0.18
USP4-206ENST00000461553 DDAH1O94760 285 aa16.18■□□□□ 0.18
USP4-206ENST00000461553 ARIH2O95376 493 aa16.18■□□□□ 0.18
USP4-206ENST00000461553 HSD17B4P51659 736 aa16.18■□□□□ 0.18
USP4-206ENST00000461553 GHRHRQ02643 423 aa16.18■□□□□ 0.18
USP4-206ENST00000461553 TROAPQ12815 778 aa16.18■□□□□ 0.18
USP4-206ENST00000461553 BMP2KLQ5H9B9 411 aa16.18■□□□□ 0.18
USP4-206ENST00000461553 CTCFLQ8NI51 663 aaPredicted RBP16.18■□□□□ 0.18
USP4-206ENST00000461553 PIGSQ96S52 555 aa16.18■□□□□ 0.18
USP4-206ENST00000461553 ALDH8A1Q9H2A2 487 aaPredicted RBP16.18■□□□□ 0.18
USP4-206ENST00000461553 RIOX1Q9H6W3 641 aa16.18■□□□□ 0.18
USP4-206ENST00000461553 MAP3K20Q9NYL2 800 aaKnown RBP16.18■□□□□ 0.18
USP4-206ENST00000461553 STXBP5LQ9Y2K9 1186 aa16.18■□□□□ 0.18
USP4-206ENST00000461553 OPLAHO14841 1288 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 PRC1O43663 620 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 GH1P01241 217 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 CSF2RAP15509 400 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 KIF5BP33176 963 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 CYP2C18P33260 490 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 MCM5P33992 734 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 FAM47CQ5HY64 1035 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 NFXL1Q6ZNB6 911 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 ZNF654Q8IZM8 581 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 SAMD3Q8N6K7 520 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 FAM161BQ96MY7 647 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.17■□□□□ 0.18
USP4-206ENST00000461553 MTA3Q9BTC8 594 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 LY9Q9HBG7 655 aa16.17■□□□□ 0.18
USP4-206ENST00000461553 PNMA6FA0A0J9YX94 578 aa16.16■□□□□ 0.18
USP4-206ENST00000461553 A6NJR5 290 aa16.16■□□□□ 0.18
USP4-206ENST00000461553 SLC27A2O14975 620 aa16.16■□□□□ 0.18
USP4-206ENST00000461553 NR3C2P08235 984 aa16.16■□□□□ 0.18
USP4-206ENST00000461553 SUPT20HL2P0C7V6 817 aa16.16■□□□□ 0.18
USP4-206ENST00000461553 SLC35G1Q2M3R5 365 aa16.16■□□□□ 0.18
USP4-206ENST00000461553 IGDCC4Q8TDY8 1250 aa16.16■□□□□ 0.18
USP4-206ENST00000461553 TMEM87BQ96K49 555 aa16.16■□□□□ 0.18
USP4-206ENST00000461553 NOC4LQ9BVI4 516 aaKnown RBP16.16■□□□□ 0.18
USP4-206ENST00000461553 TRPV6Q9H1D0 765 aa16.16■□□□□ 0.18
USP4-206ENST00000461553 MTIF3Q9H2K0 278 aaKnown RBP16.16■□□□□ 0.18
USP4-206ENST00000461553 MRVI1Q9Y6F6 885 aa16.16■□□□□ 0.18
USP4-206ENST00000461553 TMEM265A0A087WTH1 108 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 CCDC69A6NI79 296 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 GCOM1H8Y6P7 765 aaPredicted RBP16.15■□□□□ 0.18
USP4-206ENST00000461553 SH2B2O14492 632 aaPredicted RBP16.15■□□□□ 0.18
USP4-206ENST00000461553 CYTH3O43739 400 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 EIF3JO75822 258 aaKnown RBP16.15■□□□□ 0.18
USP4-206ENST00000461553 MMP3P08254 477 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 POLR2MP0CAP2 368 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 HOXA13P31271 388 aaPredicted RBP16.15■□□□□ 0.18
USP4-206ENST00000461553 LY6KQ17RY6 165 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 RNF20Q5VTR2 975 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 CREB3L3Q68CJ9 461 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 NFRKBQ6P4R8 1299 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 CCDC62Q6P9F0 684 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 GUCD1Q96NT3 240 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 MAP3K14Q99558 947 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 PDCD2LQ9BRP1 358 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 MYL10Q9BUA6 226 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 SPZ1Q9BXG8 430 aa16.15■□□□□ 0.18
USP4-206ENST00000461553 IL23AQ9NPF7 189 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms