RNA–Protein interactions for RNA: ENST00000461426.1

SIGMAR1-204, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 939 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-204ENST00000461426 ANKRD1Q15327 319 aa30.64■■■□□ 2.5
SIGMAR1-204ENST00000461426 STXBP2Q15833 593 aa30.64■■■□□ 2.5
SIGMAR1-204ENST00000461426 NOL8Q76FK4 1167 aaKnown RBP30.64■■■□□ 2.5
SIGMAR1-204ENST00000461426 RBM27Q9P2N5 1060 aaKnown RBP30.64■■■□□ 2.5
SIGMAR1-204ENST00000461426 LCTP09848 1927 aa30.64■■■□□ 2.5
SIGMAR1-204ENST00000461426 TNRC18O15417 2968 aaPredicted RBP30.64■■■□□ 2.5
SIGMAR1-204ENST00000461426 RBM47A0AV96 593 aaKnown RBP30.63■■■□□ 2.49
SIGMAR1-204ENST00000461426 hCG_1984214I3L0E3 225 aa30.63■■■□□ 2.49
SIGMAR1-204ENST00000461426 MYCNP04198 464 aaPredicted RBP30.63■■■□□ 2.49
SIGMAR1-204ENST00000461426 ZNF713Q8N859 430 aaPredicted RBP30.63■■■□□ 2.49
SIGMAR1-204ENST00000461426 LENG1Q96BZ8 264 aaPredicted RBP30.63■■■□□ 2.49
SIGMAR1-204ENST00000461426 PDE4DIPQ5VU43 2346 aa30.63■■■□□ 2.49
SIGMAR1-204ENST00000461426 ADCY6O43306 1168 aa30.62■■■□□ 2.49
SIGMAR1-204ENST00000461426 ADAMTS4O75173 837 aa30.62■■■□□ 2.49
SIGMAR1-204ENST00000461426 NR3C2P08235 984 aa30.62■■■□□ 2.49
SIGMAR1-204ENST00000461426 EIF2AK2P19525 551 aaKnown RBP30.62■■■□□ 2.49
SIGMAR1-204ENST00000461426 CCT2P78371 535 aaKnown RBP30.62■■■□□ 2.49
SIGMAR1-204ENST00000461426 FCHSD1Q86WN1 690 aa30.62■■■□□ 2.49
SIGMAR1-204ENST00000461426 TEX2Q8IWB9 1127 aa30.62■■■□□ 2.49
SIGMAR1-204ENST00000461426 SMARCC2Q8TAQ2 1214 aa30.62■■■□□ 2.49
SIGMAR1-204ENST00000461426 GNEQ9Y223 722 aaKnown RBP30.62■■■□□ 2.49
SIGMAR1-204ENST00000461426 Q9Y3F1 56 aa30.62■■■□□ 2.49
SIGMAR1-204ENST00000461426 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 PRPF3O43395 683 aaKnown RBP30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 EIF3JO75822 258 aaKnown RBP30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 SMPD1P17405 629 aa30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 GJA9P57773 515 aa30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 NTRK3Q16288 839 aa30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 SCFD2Q8WU76 684 aa30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 DPF3Q92784 378 aa30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 PDCD2LQ9BRP1 358 aa30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 LARP6Q9BRS8 491 aaKnown RBP30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 TSEN34Q9BSV6 310 aaKnown RBP30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 WDR11Q9BZH6 1224 aa30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 UPF3AQ9H1J1 476 aaKnown RBP30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 SYNRGQ9UMZ2 1314 aa30.61■■■□□ 2.49
SIGMAR1-204ENST00000461426 MEIS2O14770 477 aa30.6■■■□□ 2.49
SIGMAR1-204ENST00000461426 IFNAR1P17181 557 aa30.6■■■□□ 2.49
SIGMAR1-204ENST00000461426 NKX3-2P78367 333 aa30.6■■■□□ 2.49
SIGMAR1-204ENST00000461426 AKAP17AQ02040 695 aaKnown RBP30.6■■■□□ 2.49
SIGMAR1-204ENST00000461426 DUSP28Q4G0W2 176 aa30.6■■■□□ 2.49
SIGMAR1-204ENST00000461426 WWC2Q6AWC2 1192 aa30.6■■■□□ 2.49
SIGMAR1-204ENST00000461426 PPP1R18Q6NYC8 613 aa30.6■■■□□ 2.49
SIGMAR1-204ENST00000461426 USP17L6PQ6QN14 398 aa30.6■■■□□ 2.49
SIGMAR1-204ENST00000461426 KLHDC9Q8NEP7 349 aa30.6■■■□□ 2.49
SIGMAR1-204ENST00000461426 GPKOWQ92917 476 aaPredicted RBP eCLIP30.6■■■□□ 2.49
SIGMAR1-204ENST00000461426 SENP6Q9GZR1 1112 aaPredicted RBP30.6■■■□□ 2.49
SIGMAR1-204ENST00000461426 NEK4P51957 841 aa30.59■■■□□ 2.49
SIGMAR1-204ENST00000461426 PFKFB3Q16875 520 aaPredicted RBP30.59■■■□□ 2.49
SIGMAR1-204ENST00000461426 VSIG10LQ86VR7 867 aa30.59■■■□□ 2.49
SIGMAR1-204ENST00000461426 AP5M1Q9H0R1 490 aa30.59■■■□□ 2.49
SIGMAR1-204ENST00000461426 NCOA5Q9HCD5 579 aaKnown RBP30.59■■■□□ 2.49
SIGMAR1-204ENST00000461426 BARHL2Q9NY43 387 aa30.59■■■□□ 2.49
SIGMAR1-204ENST00000461426 C6orf222P0C671 652 aaPredicted RBP30.58■■■□□ 2.49
SIGMAR1-204ENST00000461426 CST5P28325 142 aaPredicted RBP30.58■■■□□ 2.49
SIGMAR1-204ENST00000461426 NAPAP54920 295 aa30.58■■■□□ 2.49
SIGMAR1-204ENST00000461426 CPLX2Q6PUV4 134 aaKnown RBP30.58■■■□□ 2.49
SIGMAR1-204ENST00000461426 PCSK9Q8NBP7 692 aaKnown RBP30.58■■■□□ 2.49
SIGMAR1-204ENST00000461426 RNF26Q9BY78 433 aaPredicted RBP30.58■■■□□ 2.49
SIGMAR1-204ENST00000461426 GLT8D2Q9H1C3 349 aa30.58■■■□□ 2.49
SIGMAR1-204ENST00000461426 PHF24Q9UPV7 400 aa30.58■■■□□ 2.49
SIGMAR1-204ENST00000461426 FRMPD3Q5JV73 1810 aa30.57■■■□□ 2.48
SIGMAR1-204ENST00000461426 CPLX1O14810 134 aa30.57■■■□□ 2.48
SIGMAR1-204ENST00000461426 NKRFO15226 690 aaKnown RBP eCLIP30.57■■■□□ 2.48
SIGMAR1-204ENST00000461426 DYNC1LI2O43237 492 aaPredicted RBP30.57■■■□□ 2.48
SIGMAR1-204ENST00000461426 SCG2P13521 617 aa30.57■■■□□ 2.48
SIGMAR1-204ENST00000461426 AK2P54819 239 aa30.57■■■□□ 2.48
SIGMAR1-204ENST00000461426 TTLL4Q14679 1199 aa30.57■■■□□ 2.48
SIGMAR1-204ENST00000461426 PGM5Q15124 567 aa30.57■■■□□ 2.48
SIGMAR1-204ENST00000461426 TLK2Q86UE8 772 aa30.57■■■□□ 2.48
SIGMAR1-204ENST00000461426 C22orf23Q9BZE7 217 aa30.57■■■□□ 2.48
SIGMAR1-204ENST00000461426 STXBP3O00186 592 aa30.56■■■□□ 2.48
SIGMAR1-204ENST00000461426 MYCLP12524 364 aaPredicted RBP30.56■■■□□ 2.48
SIGMAR1-204ENST00000461426 CCND2P30279 289 aa30.56■■■□□ 2.48
SIGMAR1-204ENST00000461426 GNASQ5JWF2 1037 aa30.56■■■□□ 2.48
SIGMAR1-204ENST00000461426 SEPT14Q6ZU15 432 aa30.56■■■□□ 2.48
SIGMAR1-204ENST00000461426 PHKBQ93100 1093 aa30.56■■■□□ 2.48
SIGMAR1-204ENST00000461426 SLKQ9H2G2 1235 aaPredicted RBP30.56■■■□□ 2.48
SIGMAR1-204ENST00000461426 TPCN1Q9ULQ1 816 aa30.56■■■□□ 2.48
SIGMAR1-204ENST00000461426 MOXD2PA6NHM9 499 aa30.55■■■□□ 2.48
SIGMAR1-204ENST00000461426 STK3Q13188 491 aa30.55■■■□□ 2.48
SIGMAR1-204ENST00000461426 KCNA10Q16322 511 aa30.55■■■□□ 2.48
SIGMAR1-204ENST00000461426 CCSAPQ6IQ19 270 aaPredicted RBP30.55■■■□□ 2.48
SIGMAR1-204ENST00000461426 TRIM22Q8IYM9 498 aa30.55■■■□□ 2.48
SIGMAR1-204ENST00000461426 SLC26A6Q9BXS9 759 aa30.55■■■□□ 2.48
SIGMAR1-204ENST00000461426 UPF2Q9HAU5 1272 aaKnown RBP30.55■■■□□ 2.48
SIGMAR1-204ENST00000461426 RIC8AQ9NPQ8 531 aa30.55■■■□□ 2.48
SIGMAR1-204ENST00000461426 NR2E3Q9Y5X4 410 aa30.55■■■□□ 2.48
SIGMAR1-204ENST00000461426 FRMPD4Q14CM0 1322 aa30.54■■■□□ 2.48
SIGMAR1-204ENST00000461426 EVI5O60447 810 aa30.54■■■□□ 2.48
SIGMAR1-204ENST00000461426 PFKFB2O60825 505 aa30.54■■■□□ 2.48
SIGMAR1-204ENST00000461426 TXNP10599 105 aaKnown RBP30.54■■■□□ 2.48
SIGMAR1-204ENST00000461426 RBM25P49756 843 aaKnown RBP30.54■■■□□ 2.48
SIGMAR1-204ENST00000461426 PKN1Q16512 942 aa30.54■■■□□ 2.48
SIGMAR1-204ENST00000461426 TMEM63BQ5T3F8 832 aa30.54■■■□□ 2.48
SIGMAR1-204ENST00000461426 TYW1BQ6NUM6 668 aa30.54■■■□□ 2.48
SIGMAR1-204ENST00000461426 XRRA1Q6P2D8 792 aa30.54■■■□□ 2.48
SIGMAR1-204ENST00000461426 CCDC12Q8WUD4 166 aaPredicted RBP30.54■■■□□ 2.48
SIGMAR1-204ENST00000461426 SMCO2A6NFE2 343 aa30.53■■■□□ 2.48
SIGMAR1-204ENST00000461426 CTAGE5O15320 804 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms