RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 CTSWP56202 376 aa10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 RASSF7Q02833 373 aa10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 GRAPQ13588 217 aa10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 GALNT11Q8NCW6 608 aa10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 GRAPLQ8TC17 118 aaPredicted RBP10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 RPGRQ92834 1020 aaKnown RBP10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 MKL1Q969V6 931 aa10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 GREM2Q9H772 168 aa10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 RCAN3Q9UKA8 241 aa10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 PCDHB14Q9Y5E9 798 aa10.02□□□□□ -0.81
ECHDC1-212ENST00000461239 K7ELQ4 463 aaPredicted RBP10.01□□□□□ -0.81
ECHDC1-212ENST00000461239 GFRA2O00451 464 aa10.01□□□□□ -0.81
ECHDC1-212ENST00000461239 PLIN1O60240 522 aa10.01□□□□□ -0.81
ECHDC1-212ENST00000461239 ZNF862O60290 1169 aa10.01□□□□□ -0.81
ECHDC1-212ENST00000461239 ZKSCAN2Q63HK3 967 aa10.01□□□□□ -0.81
ECHDC1-212ENST00000461239 ARHGAP27Q6ZUM4 889 aa10.01□□□□□ -0.81
ECHDC1-212ENST00000461239 DDX46Q7L014 1031 aaKnown RBP10.01□□□□□ -0.81
ECHDC1-212ENST00000461239 ANKRD44Q8N8A2 993 aa10.01□□□□□ -0.81
ECHDC1-212ENST00000461239 KLHL23Q8NBE8 558 aa10.01□□□□□ -0.81
ECHDC1-212ENST00000461239 RBBP8NLQ8NC74 664 aaPredicted RBP10.01□□□□□ -0.81
ECHDC1-212ENST00000461239 SIRPGQ9P1W8 387 aa10.01□□□□□ -0.81
ECHDC1-212ENST00000461239 PCDHA4Q9UN74 947 aa10.01□□□□□ -0.81
ECHDC1-212ENST00000461239 CACNA1SQ13698 1873 aa10.01□□□□□ -0.81
ECHDC1-212ENST00000461239 TLDC2A0PJX2 215 aa10□□□□□ -0.81
ECHDC1-212ENST00000461239 IPO8O15397 1037 aaKnown RBP10□□□□□ -0.81
ECHDC1-212ENST00000461239 BCRP11274 1271 aa10□□□□□ -0.81
ECHDC1-212ENST00000461239 IMPDH2P12268 514 aa10□□□□□ -0.81
ECHDC1-212ENST00000461239 CCT4P50991 539 aaKnown RBP10□□□□□ -0.81
ECHDC1-212ENST00000461239 INPP5AQ14642 412 aa10□□□□□ -0.81
ECHDC1-212ENST00000461239 SUZ12Q15022 739 aaKnown RBP10□□□□□ -0.81
ECHDC1-212ENST00000461239 CCDC152Q4G0S7 254 aa10□□□□□ -0.81
ECHDC1-212ENST00000461239 TNNI3KQ59H18 835 aa10□□□□□ -0.81
ECHDC1-212ENST00000461239 WIPI1Q5MNZ9 446 aaPredicted RBP10□□□□□ -0.81
ECHDC1-212ENST00000461239 ZNF746Q6NUN9 644 aaPredicted RBP10□□□□□ -0.81
ECHDC1-212ENST00000461239 LRFN4Q6PJG9 635 aa10□□□□□ -0.81
ECHDC1-212ENST00000461239 LSRQ86X29 649 aaPredicted RBP10□□□□□ -0.81
ECHDC1-212ENST00000461239 TMEM57Q8N5G2 664 aa10□□□□□ -0.81
ECHDC1-212ENST00000461239 OR6P1Q8NGX9 317 aa10□□□□□ -0.81
ECHDC1-212ENST00000461239 MEIS3Q99687 375 aa10□□□□□ -0.81
ECHDC1-212ENST00000461239 C9orf78Q9NZ63 289 aaPredicted RBP10□□□□□ -0.81
ECHDC1-212ENST00000461239 ATP6V0A2Q9Y487 856 aa10□□□□□ -0.81
ECHDC1-212ENST00000461239 RTL9Q8NET4 1388 aa10□□□□□ -0.81
ECHDC1-212ENST00000461239 WTIPA6NIX2 430 aaPredicted RBP9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 ADAM11O75078 769 aa9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 BBOX1O75936 387 aa9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 HOXB4P17483 251 aaPredicted RBP9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 RPS8P62241 208 aaKnown RBP9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 RABL6Q3YEC7 729 aaPredicted RBP9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 C20orf194Q5TEA3 1177 aa9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 FBXW10Q5XX13 1052 aa9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 LMBR1LQ6UX01 489 aa9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 SP8Q8IXZ3 490 aa9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 PANK1Q8TE04 598 aa9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 WDR89Q96FK6 387 aaPredicted RBP9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 PLPPR2Q96GM1 343 aa9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 TRIM55Q9BYV6 548 aa9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 BICC1Q9H694 974 aaKnown RBP9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 TMA7Q9Y2S6 64 aaKnown RBP9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 FER1L6Q2WGJ9 1857 aa9.99□□□□□ -0.81
ECHDC1-212ENST00000461239 LOC100289279A0A1B0GTE1 492 aa9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 DEAF1O75398 565 aaPredicted RBP9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 HSP90B1P14625 803 aaKnown RBP9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 NLRP12P59046 1061 aa9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 KIF4BQ2VIQ3 1234 aa9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 CCDC93Q567U6 631 aa9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 LYPD4Q6UWN0 246 aa9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 MAP4K3Q8IVH8 894 aa9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 DMRTC2Q8IXT2 367 aaPredicted RBP9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 DZIP1LQ8IYY4 767 aaKnown RBP9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 CRBNQ96SW2 442 aa9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 SNCAIPQ9Y6H5 919 aa9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 COL4A5P29400 1685 aa9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 LTBP3Q9NS15 1303 aa9.98□□□□□ -0.81
ECHDC1-212ENST00000461239 MYH3P11055 1940 aa9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 DUOX1Q9NRD9 1551 aa9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 LRRC37AA6NMS7 1700 aa9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 CELA2BP08218 269 aaPredicted RBP9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 LIG1P18858 919 aa9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 RFX5P48382 616 aaPredicted RBP9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 DGKGP49619 791 aa9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 GPSM2P81274 684 aa9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 PDE3AQ14432 1141 aa9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 RASA3Q14644 834 aa9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 FOXD4L6Q3SYB3 417 aaPredicted RBP9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 FOXD4L3Q6VB84 417 aaPredicted RBP9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 JAZF1Q86VZ6 243 aa9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 CELF2-AS1Q8N7Q2 184 aa9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 USP26Q9BXU7 913 aa9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 ZNF277Q9NRM2 450 aaPredicted RBP9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 PCDHGC5Q9Y5F6 944 aa9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 SBF1O95248 1867 aa9.97□□□□□ -0.81
ECHDC1-212ENST00000461239 LTBP1Q14766 1721 aa9.96□□□□□ -0.81
ECHDC1-212ENST00000461239 DDX3YO15523 660 aaKnown RBP9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 HTR3BO95264 441 aa9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 DLGAP3O95886 979 aa9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 ANKRD18AQ8IVF6 992 aa9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 RTKN2Q8IZC4 609 aa9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 PSMD1Q99460 953 aa9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 RTFDC1Q9BY42 306 aaPredicted RBP9.96□□□□□ -0.82
ECHDC1-212ENST00000461239 TAOK3Q9H2K8 898 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms