RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 DNAJC8O75937 253 aaPredicted RBP3.98□□□□□ -1.77
HPS3-203ENST00000460822 GUCY2FP51841 1108 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 STRN3Q13033 797 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 TTF1Q15361 905 aaPredicted RBP3.98□□□□□ -1.77
HPS3-203ENST00000460822 NR0B2Q15466 257 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 BRAPQ7Z569 592 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 TMC3Q7Z5M5 1100 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 PPM1KQ8N3J5 372 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 USHBP1Q8N6Y0 703 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 SLC7A14Q8TBB6 771 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 OSBP2Q969R2 916 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 HDAC8Q9BY41 377 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 SLC52A2Q9HAB3 445 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 TRIM39Q9HCM9 518 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 CHST7Q9NS84 486 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 NDOR1Q9UHB4 597 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 ZNF451Q9Y4E5 1061 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 NCANO14594 1321 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 NOP56O00567 594 aaKnown RBP3.98□□□□□ -1.77
HPS3-203ENST00000460822 SIGLEC6O43699 453 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 FKTNO75072 461 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 PEX14O75381 377 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 KATNA1O75449 491 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 PPM1BO75688 479 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 TSPAN15O95858 294 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 CAPNS1P04632 268 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 C6orf222P0C671 652 aaPredicted RBP3.98□□□□□ -1.77
HPS3-203ENST00000460822 CD247P20963 164 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 ZNF460Q14592 562 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 TRIM61Q5EBN2 209 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 DDX46Q7L014 1031 aaKnown RBP3.98□□□□□ -1.77
HPS3-203ENST00000460822 IRF2BP1Q8IU81 584 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 WDR75Q8IWA0 830 aaKnown RBP3.98□□□□□ -1.77
HPS3-203ENST00000460822 CCDC146Q8IYE0 955 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 BTN2A2Q8WVV5 523 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 CCDC136Q96JN2 1154 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 DSCC1Q9BVC3 393 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 KRTAP9-3Q9BYQ3 159 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 PRDM14Q9GZV8 571 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 WHRNQ9P202 907 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 WASHC2CQ9Y4E1 1318 aa3.98□□□□□ -1.77
HPS3-203ENST00000460822 MEIS1O00470 390 aa3.97□□□□□ -1.77
HPS3-203ENST00000460822 PRAMEF1O95521 474 aa3.97□□□□□ -1.77
HPS3-203ENST00000460822 EYA4O95677 639 aa3.97□□□□□ -1.77
HPS3-203ENST00000460822 CPEP16870 476 aa3.97□□□□□ -1.77
HPS3-203ENST00000460822 PKN3Q6P5Z2 889 aa3.97□□□□□ -1.77
HPS3-203ENST00000460822 FGD2Q7Z6J4 655 aa3.97□□□□□ -1.77
HPS3-203ENST00000460822 CILP2Q8IUL8 1156 aa3.97□□□□□ -1.77
HPS3-203ENST00000460822 LINC00116Q8NCU8 138 aa3.97□□□□□ -1.77
HPS3-203ENST00000460822 DDX1Q92499 740 aaKnown RBP3.97□□□□□ -1.77
HPS3-203ENST00000460822 INTS4Q96HW7 963 aaKnown RBP3.97□□□□□ -1.77
HPS3-203ENST00000460822 MRGPRX3Q96LB0 322 aa3.97□□□□□ -1.77
HPS3-203ENST00000460822 GP6Q9HCN6 339 aa3.97□□□□□ -1.77
HPS3-203ENST00000460822 AKT3Q9Y243 479 aa3.97□□□□□ -1.77
HPS3-203ENST00000460822 YBX2Q9Y2T7 364 aaKnown RBP3.97□□□□□ -1.77
HPS3-203ENST00000460822 BLACEA4D250 179 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 OPA1O60313 960 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 KPNA6O60684 536 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 KCNH1O95259 989 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 C1QTNF9P0C862 333 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 ITGA4P13612 1032 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 KIR2DL1P43626 348 aaPredicted RBP3.96□□□□□ -1.77
HPS3-203ENST00000460822 KIR2DL2P43627 348 aaPredicted RBP3.96□□□□□ -1.77
HPS3-203ENST00000460822 NEK4P51957 841 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 EPHB1P54762 984 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 GABREP78334 506 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 SNW1Q13573 536 aaKnown RBP3.96□□□□□ -1.77
HPS3-203ENST00000460822 AUHQ13825 339 aaKnown RBP3.96□□□□□ -1.77
HPS3-203ENST00000460822 PCBP1Q15365 356 aaKnown RBP eCLIP3.96□□□□□ -1.77
HPS3-203ENST00000460822 SF1Q15637 639 aaKnown RBP3.96□□□□□ -1.77
HPS3-203ENST00000460822 ANKRD39Q53RE8 183 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 CWF19L1Q69YN2 538 aaKnown RBP3.96□□□□□ -1.77
HPS3-203ENST00000460822 LILRA6Q6PI73 481 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 POMZP3Q6PJE2 187 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 ATG14Q6ZNE5 492 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 CEP128Q6ZU80 1094 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 ZNF605Q86T29 641 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 TRIM59Q8IWR1 403 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 SIRT2Q8IXJ6 389 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 C7orf61Q8IZ16 206 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 BRF1Q92994 677 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 PSMD1Q99460 953 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 SMAD5Q99717 465 aaKnown RBP3.96□□□□□ -1.77
HPS3-203ENST00000460822 ASPSCR1Q9BZE9 553 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 GFOD1Q9NXC2 390 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 CGGBP1Q9UFW8 167 aaPredicted RBP3.96□□□□□ -1.77
HPS3-203ENST00000460822 EMC9Q9Y3B6 208 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 RIPOR2Q9Y4F9 1068 aa3.96□□□□□ -1.77
HPS3-203ENST00000460822 TNPO3Q9Y5L0 923 aaKnown RBP3.96□□□□□ -1.77
HPS3-203ENST00000460822 PRC1O43663 620 aa3.96□□□□□ -1.78
HPS3-203ENST00000460822 DLX3O60479 287 aa3.96□□□□□ -1.78
HPS3-203ENST00000460822 USP2O75604 605 aaPredicted RBP3.96□□□□□ -1.78
HPS3-203ENST00000460822 JMJD7P0C870 316 aa3.96□□□□□ -1.78
HPS3-203ENST00000460822 MTMR1Q13613 665 aa3.96□□□□□ -1.78
HPS3-203ENST00000460822 SEPT7Q16181 437 aaKnown RBP3.96□□□□□ -1.78
HPS3-203ENST00000460822 NFE2Q16621 373 aaPredicted RBP3.96□□□□□ -1.78
HPS3-203ENST00000460822 NOL9Q5SY16 702 aaKnown RBP3.96□□□□□ -1.78
HPS3-203ENST00000460822 LHFPL2Q6ZUX7 228 aa3.96□□□□□ -1.78
HPS3-203ENST00000460822 AHI1Q8N157 1196 aa3.96□□□□□ -1.78
HPS3-203ENST00000460822 CRACR2BQ8N4Y2 399 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms